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1,000 results • Page
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Sort: Votes
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5
votes
1
reply
2.3k
views
News:
New version of the GATB library
minia
next-gen
gatb
dsk
updated 2.3 years ago by
Ram
43k • written 9.2 years ago by
edrezen
▴ 730
5
votes
3
replies
1.5k
views
News:
Bioinfo-Core Conference Call, October 17, 2017 (11 am EDT USA, local times around world)
bioinfo-core
updated 13 months ago by
Ram
43k • written 6.7 years ago by
GenoMax
141k
5
votes
1
reply
1.1k
views
News:
New biostar-tools metaport for FreeBSD
freebsd
software
2.6 years ago by
bacon4000
▴ 80
5
votes
0
replies
1.8k
views
News:
The future of the postdoc
sequencing
Postdoc
updated 22 months ago by
Ram
43k • written 9.1 years ago by
HG
★ 1.2k
5
votes
2
replies
3.7k
views
News:
Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser
RNA-seq
ChIP-seq
updated 14 months ago by
Ram
43k • written 10.5 years ago by
Ann
★ 2.4k
5
votes
4
replies
1.9k
views
News:
2nd International Conference on Pediatric Oncology and Pediatric Medicine
gene
updated 12 months ago by
Ram
43k • written 7.2 years ago by
pediatriconcology
• 0
5
votes
1
reply
1.6k
views
News:
2-day WORKSHOP on SNAKEMAKE
next-gen
updated 11 months ago by
Ram
43k • written 5.9 years ago by
carlopecoraro2
★ 2.5k
5
votes
1
reply
1.2k
views
News:
Paid opportunity: need microbiome experts for a survey and test of robustness
survey
updated 14 months ago by
Ram
43k • written 3.5 years ago by
Jeremy Leipzig
22k
5
votes
0
replies
2.3k
views
News:
[UPDATED] Hands-On NGS Data Analysis Workshops 2019
NGS
Bisulfite-Seq
RNA-Seq
DNA-Seq
updated 11 months ago by
Ram
43k • written 5.4 years ago by
David Langenberger
11k
4
votes
1
reply
2.1k
views
News:
Mark2Cure launches tool to help crowd-source curation of the biomedical literature
crowd-sourcing
updated 16 months ago by
Ram
43k • written 9.3 years ago by
Obi Griffith
20k
4
votes
5
replies
2.8k
views
News:
Kover will provide support via Biostars
kmer
kover
machine-learning
updated 12 months ago by
Ram
43k • written 7.9 years ago by
Alexandre Drouin
▴ 90
4
votes
0
replies
1.8k
views
News:
Call for Abstracts for the 18th Annual Bioinformatics Open Source Conference (BOSC 2017)
BOSC
OBF
updated 12 months ago by
Ram
43k • written 7.1 years ago by
Chris Fields
★ 2.2k
4
votes
3
replies
1.9k
views
News:
How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications
ChIP-Seq
RNA-Seq
updated 12 months ago by
Ram
43k • written 7.3 years ago by
Bohdan Khomtchouk
▴ 350
4
votes
0
replies
1.5k
views
News:
All of Us (NIH) precision medicine research program is now open for enrollment
precision-medicine
updated 11 months ago by
Ram
43k • written 6.0 years ago by
GenoMax
141k
4
votes
0
replies
6.4k
views
News:
The genome Aggregation Database (gnomAD)
gnomAD
updated 12 months ago by
Ram
43k • written 7.2 years ago by
Pierre Lindenbaum
161k
4
votes
0
replies
204
views
News:
Transform Your Research with Our NGS Data Analysis Online Course!
DNAseq
NGS
Biologists
OnlineCourse
RNAseq
3 months ago by
David Langenberger
11k
4
votes
1
reply
1.9k
views
News:
scRNA-seq data analysis Workshop in Berlin
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.5 years ago by
carlopecoraro2
★ 2.5k
4
votes
0
replies
910
views
News:
The BioCompute Object App-a-thon starts on May 14!
standards
computation
pipeline
updated 13 months ago by
Ram
43k • written 5.0 years ago by
stephens_sarah
▴ 150
4
votes
1
reply
1.4k
views
News:
The 1000 Genomes Project Data Portal Beta Release
1000genomes
next-gen
SNP
updated 12 months ago by
Ram
43k • written 8.0 years ago by
Laura
★ 1.8k
4
votes
0
replies
3.0k
views
News:
New simulation dataset for 'A benchmark for RNA-seq quantification pipelines'
RNA-Seq
updated 12 months ago by
Ram
43k • written 7.9 years ago by
Michael Love
★ 2.6k
4
votes
0
replies
721
views
News:
Call for Bioinformatics Papers - Genes Special Issue
gene
updated 10 months ago by
Ram
43k • written 4.3 years ago by
Federico Giorgi
▴ 730
4
votes
3
replies
2.2k
views
News:
India Recently Started Personal Genome Profiling, Commercially.
genome-profiling
updated 14 months ago by
Ram
43k • written 11.0 years ago by
Naren
▴ 1000
4
votes
0
replies
1.7k
views
News:
Iscb Wikipedia Competition 2013
wikipedia
updated 14 months ago by
Ram
43k • written 10.7 years ago by
Ben
★ 2.0k
4
votes
4
replies
1.9k
views
News:
12th International Conference on Advancements in Bioinformatics and Drug Discovery
genome
Computational-Biology
updated 11 months ago by
Ram
43k • written 6.0 years ago by
bioinformatics
▴ 20
4
votes
0
replies
2.2k
views
News:
Rna-Seq Workshop In Oslo - Seats Available
RNA-seq
updated 14 months ago by
Ram
43k • written 10.2 years ago by
jan.christian
▴ 60
4
votes
4
replies
2.9k
views
News:
Join The Dnanexus Developer Program
api
cloud
updated 14 months ago by
Ram
43k • written 10.9 years ago by
akislyuk
▴ 30
4
votes
3
replies
3.2k
views
News:
-max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
blast
updated 11 months ago by
Ram
43k • written 5.5 years ago by
5heikki
11k
4
votes
2
replies
3.1k
views
News:
NCBI NOW (Next generation sequencing Online Workshop) October 13 - 23 , 2015
NCBI
DNA-Seq
NGS
RNA-Seq
updated 13 months ago by
Ram
43k • written 8.6 years ago by
rtliu
★ 2.2k
4
votes
3
replies
3.3k
views
News:
CAFE v4.0 available
phylogenetics
CAFE
updated 11 months ago by
Ram
43k • written 7.1 years ago by
Ben Fulton
▴ 150
4
votes
0
replies
2.4k
views
News:
Google Genomics and Broad Institute Team Up to Tackle Genomic Data
google
broad
gatk
updated 16 months ago by
Ram
43k • written 8.9 years ago by
William
★ 5.3k
4
votes
1
reply
2.2k
views
News:
2014 ISCB Wikipedia Article Competition announcement
ISCB
competition
Wikipedia
written 9.7 years ago by
Ben
★ 2.0k
4
votes
0
replies
1.2k
views
News:
Workshop for genomic data visualization and interpretation
R
RNA-Seq
ggplot2
genomics
updated 11 months ago by
Ram
43k • written 5.4 years ago by
Malachi Griffith
19k
4
votes
0
replies
1.9k
views
News:
Bioinformatics education: biology-inspired bioinformatics with project-based learning
education
RNA-seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
elia.brodsky
▴ 340
4
votes
1
reply
2.3k
views
News:
ENCODE Users' Meeting
encode
ucsc
conference
functional-genomics
ensembl
updated 21 months ago by
Ram
43k • written 8.9 years ago by
Emily
23k
4
votes
0
replies
1.6k
views
News:
$650M gift to Broad seeks to propel (Genomics based ) psychiatric research
sequencing
updated 13 months ago by
Ram
43k • written 9.8 years ago by
William
★ 5.3k
4
votes
0
replies
1.5k
views
News:
Helen Berman Wins The 2013 Delano Award For Computational Biosciences
delano-award
updated 14 months ago by
Ram
43k • written 11.1 years ago by
Casey Bergman
18k
4
votes
0
replies
2.4k
views
News:
2nd UK Bioinformatics Student Symposium on 7 Oct '15 at TGAC, Norwich
symposium
updated 19 months ago by
Ram
43k • written 8.7 years ago by
sayonidas03
▴ 100
4
votes
1
reply
1.2k
views
News:
Bioinformatics Workflows with Nextflow
Netflow
reproducibility
Workflows
updated 10 months ago by
Ram
43k • written 4.4 years ago by
carlopecoraro2
★ 2.5k
4
votes
4
replies
1.7k
views
News:
VCFclin working group
vcfclin
updated 13 months ago by
Ram
43k • written 10.0 years ago by
keilbeck
▴ 30
4
votes
0
replies
1.9k
views
News:
Viral Bioinformatics and Genomics course August 2017, Glasgow
next-gen
updated 12 months ago by
Ram
43k • written 7.2 years ago by
richard.orton
▴ 40
4
votes
0
replies
2.9k
views
News:
Python for Scientists - FREE Ebook from O'Reilly
python
Data-Analysis
updated 13 months ago by
Ram
43k • written 8.6 years ago by
rtliu
★ 2.2k
4
votes
2
replies
2.9k
views
News:
New ebook: From cell line to Command line to learn computational biology
unix
snakemake
computational-biology
RNA-seq
5 months ago by
Ming Tommy Tang
★ 3.9k
4
votes
0
replies
648
views
News:
A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS
RNA-Seq
single-cell
workshop
10 months ago by
David Langenberger
11k
4
votes
0
replies
1.4k
views
News:
ONLINE course - Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
next-gen-sequencing
updated 10 months ago by
Ram
43k • written 4.1 years ago by
carlopecoraro2
★ 2.5k
4
votes
2
replies
1.3k
views
News:
Hands-On Workshop: How to use bisulfite-treated sequencing to study DNA methylation (BS-Seq, Bisulfite-Seq, WGBS)
Workshop
methylation
bisulfite
updated 10 months ago by
Ram
43k • written 4.6 years ago by
Lars
★ 1.0k
4
votes
0
replies
2.4k
views
News:
Upcoming Workshop: Ensembl Perl APIs
ensembl
APIs
Perl
workshops
updated 13 months ago by
Ram
43k • written 9.5 years ago by
Denise CS
★ 5.2k
4
votes
1
reply
1.8k
views
News:
Bioinformatics Contest 2018
contest
updated 11 months ago by
Ram
43k • written 6.3 years ago by
ksenya1.618
▴ 40
4
votes
0
replies
1.0k
views
News:
SIG Workshop to discuss developments in computational pathology and its interfacing opportunities with bioinformatics during ECCB 2018
microscopy
wsi
digital-pathology
updated 11 months ago by
Ram
43k • written 5.7 years ago by
yves.sucaet
▴ 40
4
votes
3
replies
1.9k
views
News:
Boston Genomics Hackathon (facilitated by NCBI)
NCBI
RNA-Seq
DNA-seq
hackathon
updated 12 months ago by
Ram
43k • written 8.1 years ago by
DCGenomics
▴ 330
4
votes
3
replies
1.0k
views
News:
You may need to cleanup duplicate NCBI BLAST nt database volumes on your system
databases
NCBI
BLAST
8 months ago by
PeterC_NCBI
▴ 410
1,000 results • Page
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Recent Votes
Comment: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Comment: PDB related issue
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Recent Replies
Answer: Is it possible to bulk download files from GEO repository?
by
atharvakarkare14
▴ 10
Try using this library [GEOparse][1] [1]: https://github.com/guma44/GEOparse
Answer: How many reads for WGS Sequencing?
by
Ruqaiya
• 0
OK. Problem solved. The problem was from my end. Thank you both for helping !!
Comment: NGS forensics: how to know if data is fabricated
by
Mensur Dlakic
★ 27k
Appreciate the suggestion, but that ship has sailed and reached the other shore. This happened 10+ years ago. To the best of my knowledge n…
Comment: Figures are disappeared from html report of SnpEff
by
analyst
▴ 30
Files are not opening in any of the computer (ubuntu/windows). I rereun snpEff annotation but still output html files are having missing im…
Comment: Figures are disappeared from html report of SnpEff
by
analyst
▴ 30
I reinstalled nodejs: > sudo apt-get install nodejs Its already up to date with version v10.19.0
Answer: NGS forensics: how to know if data is fabricated
by
Prash
▴ 280
Mensur, if I were you, I'd probably contact the CA directly and check with him whether they have reproduced the works recently. There coul…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴ 550
Working on it - it's actually a bit difficult. Low coverage of ribosomal proteins. Low coverage of housekeeping genes ...I'm trying to find…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴ 550
I'm a bit against pubpeer - have you ever posted there? My gripe with them is that the posts are heavily moderated and EDITED to the point…
Comment: NGS forensics: how to know if data is fabricated
by
Philipp Bayer
8.4k
Thanks Mensur! I'd add that in 9 out of 10 cases, you won't receive a reply to a request for raw data. That's just how scientists are, does…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
• 0
I had downloaded the two files in a similar manner actually.
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
• 0
ok, i'll try to use fastp. I have only used trimmomatic and cutadapt till now and they dont identify on its own. Except the graph in fastqc…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
• 0
got it! even if i'm doing the assembly for paired end with both the files do i have set the threshold to 1000bp ?
Comment: NGS forensics: how to know if data is fabricated
by
Philipp Bayer
8.4k
i've been in our org trying to push such a detector, our use-case is much more limited: I want to make simulated eDNA libraries as real as …
Answer: Differential Expression using Isoseq-supplemented reference transcriptome
by
Gordon Smyth
★ 7.0k
> What is the best method to test for differential abundance at the isoform level? Salmon returns TPM values instead of the counts which Li…
Comment: NGS forensics: how to know if data is fabricated
by
benformatics
3.9k
Can you post an IGV screenshot of what this looks like?
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