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233 results • Page
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News:
Online statistics courses
R
statistics
8 months ago by
carlopecoraro2
★ 2.2k
0
votes
1
reply
335
views
News:
API for accessing SARS-COV-2 genomic data
rpackage
sars
genomics
api
covid
updated 8 months ago by
GenoMax
125k • written 8 months ago by
Emily
• 0
2
votes
0
replies
333
views
News:
UniProt: Annotation of biologically relevant ligands using ChEBI
binding
protein
site
metal
uniprot
chebi
8 months ago by
Elisabeth Gasteiger
★ 2.2k
3
votes
0
replies
364
views
News:
Tutorial on SemiBin (metagenonomics binning tool). June 14 - online
metagenomics
binning
updated 8 months ago by
GenoMax
125k • written 8 months ago by
Luispedro
▴ 60
0
votes
0
replies
232
views
News:
Nanopore direct RNA Sequencing - online course
Sequencing
direct
Nanopore
RNA
8 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
228
views
News:
ONLINE COURSE - LINEAR MIXED MODELS IN R - September 26th-30th
Models
Mixed
R
8 months ago by
carlopecoraro2
★ 2.2k
7
votes
1
reply
434
views
News:
NGSymposium - Conference in Computational Biology, 23-24.09
ML
statistics
conference
ngschool
8 months ago by
kzkedzierska
▴ 290
0
votes
0
replies
273
views
News:
ONLINE course "Population genomic inference from low-coverage whole-genome sequencing data"
lcWGS
Genomics
Population
8 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
278
views
News:
Online course - Metabarcoding in microbial Ecology
Qiime2
Metabarcoding
Microbial-Ecology
updated 7 weeks ago by
Ram
37k • written 9 months ago by
carlopecoraro2
★ 2.2k
3
votes
1
reply
363
views
News:
Free web seminars related to small non-coding RNA bioinformatics
smallRNA
microRNA
updated 7 weeks ago by
Ram
37k • written 9 months ago by
laurent.guyon
▴ 60
0
votes
0
replies
276
views
News:
ONLINE COURSE - RADseq data analysis using Stacks
Phylogenomics
Population
RADseq
Genomics
Stacks
8 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
256
views
News:
Online course - Developing R/Bioconductor packages for genomics
Bioconductor
R
updated 7 weeks ago by
Ram
37k • written 9 months ago by
carlopecoraro2
★ 2.2k
1
vote
0
replies
389
views
News:
Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge is now live!
oncopanel
indel-calling
updated 7 weeks ago by
Ram
37k • written 9 months ago by
sarah_p
▴ 10
0
votes
2
replies
530
views
News:
ClusteredNR NCBI BLAST database provides faster searches and more informative BLAST results
NCBI
BLAST
9 months ago by
PeterC_NCBI
▴ 180
0
votes
0
replies
189
views
News:
NCBI poster at Bio-IT World on the new cloud BLAST tool, ElasticBLAST
NCBI
BLAST
ElasticBLAST
9 months ago by
PeterC_NCBI
▴ 180
1
vote
0
replies
265
views
News:
DATA ANALYSIS WITH THE TIDYVERSE in July (18th-21st).
tidyverse
data
R
analysis
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
349
views
News:
Introduction to Nextflow course
Nextflow
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
304
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (May 16-18, 2022)
NGS
RNA
DNA
Workshop
9 months ago by
David Langenberger
9.8k
6
votes
0
replies
334
views
News:
NGSchool2022: Machine Learning in Computational Biology
summer
machine
learning
school
ngschool
ML
statistics
9 months ago by
kzkedzierska
▴ 290
0
votes
1
reply
317
views
News:
Introduction to Deep Learning course
DeepLearning
MachineLearning
bigdata
updated 9 months ago by
cpad0112
21k • written 9 months ago by
carlopecoraro2
★ 2.2k
3
votes
3
replies
708
views
News:
Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow
NGS
pipeline
9 months ago by
David Langenberger
9.8k
0
votes
0
replies
851
views
News:
Pre-Register for the NCTR Indel Calling from Oncopanel Sequencing Data Challenge with FDA’s National Center for Toxicological Research (NCTR) and pre…
oncopanel
indel-calling
updated 7 weeks ago by
Ram
37k • written 9 months ago by
sarah_p
▴ 10
0
votes
0
replies
245
views
News:
Virtual Genome Assembly Workshop : May 16-19, 2022
assembly
Genome
Workshop
9 months ago by
singh.vijender
▴ 50
1
vote
0
replies
272
views
News:
Data visualization in Python course
Data
Visualization
Python
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
244
views
News:
Landscape Genomics in R course
LandscapeGenomics
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
257
views
News:
Gene Set Enrichment Analysis in R workshop
GSE
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
233
views
News:
Conservation Genomics Workshop
ConservationGenomics
9 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
250
views
News:
A webinar about Harmony batch correction, by its author
scrna-seq
single-cell
rna-seq
10 months ago by
Jennifer Pham
▴ 450
0
votes
1
reply
2.1k
views
News:
Nature Index: Novogene is teaming up with laboratories worldwide for life sciences and human health research
NGS
Nature
Sequencing
updated 7 weeks ago by
Ram
37k • written 10 months ago by
Novogene
▴ 220
0
votes
1
reply
765
views
News:
::FINAL CALL:: Online Course | A Practical Introduction to NGS Data Analysis | March 30 - April 1, 2022
DNA-Seq
RNA-Seq
Workshop
10 months ago by
David Langenberger
9.8k
1
vote
0
replies
250
views
News:
Reproducibility in Bioinformatics Workshop
Reproducibility
updated 7 weeks ago by
Ram
37k • written 10 months ago by
carlopecoraro2
★ 2.2k
0
votes
1
reply
367
views
News:
6th Berlin Summer School in NGS Data Analysis (June 13-17, 2022)
RNAseq
DNAseq
transcriptomics
10 months ago by
David Langenberger
9.8k
0
votes
0
replies
233
views
News:
Cellosaurus release 41 is available
biocuration
knowledgebase
cell
news
line
databases
10 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
230
views
News:
RNAseq workshop (Model Species) : April4-7, 2022
RNAseq
Model
species
Workshop
10 months ago by
singh.vijender
▴ 50
1
vote
0
replies
363
views
News:
:: LAST CALL :: Bioinformatics Pipeline Development with Nextflow (April 4-7, 2022)
NGS
Pipeline-Development
Nextflow
updated 7 weeks ago by
Ram
37k • written 11 months ago by
David Langenberger
9.8k
0
votes
0
replies
270
views
News:
4th edition of the GWAS course
GWAS
11 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
258
views
News:
Course - An introduction to Nanopore direct RNA Sequencing
NanoporeDirectRNAseq
11 months ago by
carlopecoraro2
★ 2.2k
3
votes
0
replies
550
views
News:
Nextflow Slack Channel
nextflow
slack
11 months ago by
ATpoint
68k
0
votes
0
replies
287
views
News:
Reproducible Analysis With R course
Reproducibility
11 months ago by
carlopecoraro2
★ 2.2k
8
votes
1
reply
987
views
News:
Clustered `nr` database is now available for web blast @NCBI
nr
blast
updated 11 months ago by
Mensur Dlakic
★ 22k • written 12 months ago by
GenoMax
125k
0
votes
0
replies
275
views
News:
Reproducible data science with R course
R
11 months ago by
carlopecoraro2
★ 2.2k
0
votes
1
reply
676
views
News:
::LAST CALL:: RNA-Seq Data Analysis Workshop, February 28 - March 3, 2022 in Berlin
RNAseq
Transcriptomics
RNA
11 months ago by
David Langenberger
9.8k
0
votes
0
replies
274
views
News:
Machine Learning in R - course
MachineLearning
12 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
228
views
News:
Paleobiology in R: FOSSIL RECORD BIASES, DIVERSITY, & BIOGEOGRAPHY - course
Paleobiology
12 months ago by
carlopecoraro2
★ 2.2k
8
votes
8
replies
2.2k
views
News:
Coronavirus Genome Analysis: a new volume in the Biostar Handbook
biostar handbook
bioinformatics
education
News
written 2.9 years ago by
Istvan Albert
96k
6
votes
13
replies
1.4k
views
News:
Ensembl reduced functionality: 10th March-16th April 2020
Ensembl
VEP
BLAT
service
News
5 months ago by
Ben_Ensembl
★ 2.2k
0
votes
0
replies
626
views
News:
Illumina Webinar Germany
ngs
sequencing
updated 5 months ago by
Ram
37k • written 3.2 years ago by
srossnagl
• 0
0
votes
0
replies
1.2k
views
News:
EMBO Practical Course: Microbial Metagenomics
Genomic-technologies
updated 8 weeks ago by
Ram
37k • written 3.3 years ago by
EMBL Events
• 0
8
votes
4
replies
1.5k
views
News:
supporting vg users on biostars
vg
graph
vgteam
genome
News
variation
updated 7 weeks ago by
colindaven
4.4k • written 3.4 years ago by
Erik Garrison
★ 2.3k
0
votes
0
replies
792
views
News:
Training in Metagenomics Data Analysis @ NIH
next-gen
Metagenomics
training
updated 8 weeks ago by
Ram
37k • written 3.5 years ago by
AABI
▴ 130
233 results • Page
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Deseq2 with one factor and multiple levels
Answer: Error while trying to install salmon
Answer: Forcing Installation Of DMRcate
Gene Expression Omnibus Data Mining (IA): Quick and easy download of GEO data
SNP calling
Comment: Annotating ENS codes to gene name
1000 genomes project reference panel - GRCh38
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Comment: Network analysis for two Factors
by
seidel
10k
Have you looked at any tutorials? Three are many out there. ([1][1], [2][2], [3][3], [etc.][4]) Do you have a preferred language? [1]: …
Comment: ceres score in crispr screen
by
seidel
10k
Are you looking for moral support or technical support? Have you tried using it with an older version of R and bioconductor? (i.e. circa 20…
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
If you aren't willing to provide more precise information than this, sufficient for a reader to reproduce what you're seeing, I will delete…
Answer: Error while trying to install salmon
by
Chris
▴ 10
Donwloading the package from conda (https://anaconda.org/conda-forge/boost/files?version=1.60.0) worked for me wget https://anaconda.org/…
Answer: finding error to run edgeR, error in ploting MDS and after that in model matrix
by
Gordon Smyth
★ 5.4k
First issue is that GEO series matrix files can't be read using `read.delim`. Second issue is the data are from Agilent microarrays and …
Comment: PLINK2 selecting variants based on INFO score
by
m.c.roozen
• 0
I have tried that (the .pvar file contains the "1:10586" form as ID which I mentioned above) which leads to the same output as above, 0 var…
Answer: samtools markdup in Rsamtools
by
joe
▴ 350
You can run any system command from inside R using `system()`. This works well if there is a single command without many dependencies. For …
Comment: samtools markdup in Rsamtools
by
Pierre Lindenbaum
152k
> But other solutions are also fine: bash, nextflow, snakemake
Answer: samtools markdup in Rsamtools
by
ATpoint
68k
My honest opinion: Do processing of sequencing data on the standard command line with samtools. There is no need for the added complexity t…
Comment: To batch correct or analyse separately?
by
predeus
★ 1.8k
Another great and up-to-date resource is this: https://www.sc-best-practices.org/preamble.html
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
The --exclude file must use the same variant IDs as your .pvar file. You should elaborate on what seemed to go wrong when you tried to arr…
Comment: phylogeny
by
炫
• 0
Hello, my problem is the same as yours, did you finally solve this problem?
Comment: phylogeny
by
炫
• 0
您好,我的问题和您的一模一样,请问您这个问题最终解决了吗
Comment: Issue with hmmcalibrate during tutorial.
by
apcreyes29
• 0
If that's the case then I'll just proceed then. Thank you!
Answer: To batch correct or analyse separately?
by
ATpoint
68k
Instead of writing that all down I recommend to read the relevant part of the Bioconductor scRNA-seq book (OSCA) which covers the "how's" a…
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