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900 results • Page 6 of 18
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News: Training in Bioinformatic Analysis of Next Generation Sequencing Data@NIH
Genomics RNA-Seq Biomedical next-gen
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
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0
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409
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News: Online course Python Machine Learning in Biology, November 16, 2023
machine-learning python course
updated 6 months ago by 43k • written 6 months ago by • 0
0
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0
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792
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News: Training in Statistical Analysis using R @NIH, July 8 - 10, 2020
R Biomedical next-gen Statistical-analysis
updated 10 months ago by 43k • written 4.0 years ago by ▴ 140
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0
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113
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News: hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models GLM R
updated 3 days ago by 43k • written 4 days ago by ★ 2.5k
0
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0
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377
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News: course on Reproducibility data analysis with R
R Reproducibility Git Github
10 months ago by carlopecoraro2 ★ 2.5k
0
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0
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810
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News: Training in Linux for Biomedical Researchers@NIH, USA,May 13-15,2020
Linux Training Biomedical Researchers Programming
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
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0
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875
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News: GelToWGS: A database for comparing PFGE results to numerical models derived from whole genome sequences of some pathogenic bacteria
genome sequence
updated 11 months ago by 43k • written 6.0 years ago by • 0
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0
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1.2k
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News: Short Term Industrial Bioinformatics Training for life sciences
genome ChIP-Seq next-gen R rna-seq
updated 11 months ago by 43k • written 6.7 years ago by • 0
0
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1.8k
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News: Course: Introduction to Bioinformatics using Linux. Berlin, 12-16 March 2018
next-gen alignment Assembly
updated 11 months ago by 43k • written 6.3 years ago by ★ 2.5k
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760
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News: Interested in learning more about CRISPR Genome Editing?
Genome-Editing CRISPR
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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720
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News: Training in Rosetta for Molecular Modeling and Design @NIH,June 22-25,2020
Data-analysis Modeling RNA-Seq Molecular-design
updated 10 months ago by 43k • written 4.0 years ago by ▴ 140
1
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1.1k
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News: Crowdsourcing the Advancement of Microbiome Research: precisionFDA & Mosaic Challenges Launched!
next-gen challenge metagenomics
updated 11 months ago by 43k • written 6.2 years ago by ▴ 40
0
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0
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844
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News: Online Live TScourse: Python Machine Learning in Biology (July 20th-24th, 2020)
online-course Python Machine-learning
updated 10 months ago by 43k • written 4.0 years ago by ▴ 70
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0
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381
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
2
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0
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841
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News: The deadline for Subchallenge 1 of the precisionFDA NCI-CPTAC Mislabeling Challenge is 11/4!
multi-omics challenge
updated 11 months ago by 43k • written 5.5 years ago by ▴ 40
0
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0
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1.4k
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News: Joint webinar by Agilent Technologies and Strand Life Sciences on 'Analysis of Variants using GeneSpring GX'
agilent variant-analysis strand genespring
updated 11 months ago by 43k • written 6.5 years ago by ▴ 70
0
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1.2k
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News: Our CEO co-authored and is responding today on Reddit: Using large DNA databases to identify the way human populations continue to evolve.
genome evolution DNA-datasets
updated 11 months ago by 43k • written 6.6 years ago by ▴ 30
0
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0
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680
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News: EMBL Course: Computing Skills For Reproducible Research: Software Carpentry
Computation
updated 10 months ago by 43k • written 4.5 years ago by ▴ 10
0
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0
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923
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News: Register for SMRT Developers Informatics Conference at PAG 2018
SequelSystem SMRT-Sequencing
updated 11 months ago by 43k • written 6.4 years ago by • 0
0
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0
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725
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News: Training in Creating Plots, Graphs and Maps using R @ NIH
R-Platform RGraphs Biomedical NGS
updated 10 months ago by 43k • written 3.8 years ago by ▴ 140
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659
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News: Training in Variant Analysis@NIH,June 2-5, 2020
Variant-analysis Genotype Variant-calling next-gen
updated 10 months ago by 43k • written 4.0 years ago by ▴ 140
1
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0
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718
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News: Training - Data visualization in R with ggplot2
R Dataviz ggplot2
updated 10 months ago by 43k • written 3.7 years ago by ★ 2.5k
0
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0
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1.5k
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News: BioVM 18.04 - call for testing and feedback
ubuntu virtual-machine linux biovm
updated 11 months ago by 43k • written 6.0 years ago by ▴ 320
0
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0
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763
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News: Training in Creating Plots, Graphs and Maps using R @ NIH
Biomedical next-gen Data-analysis
updated 11 months ago by 43k • written 4.7 years ago by ▴ 140
0
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0
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193
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News: Virtual Workshops with the UConn Computational Biology Core
Workshop genomics
updated 10 weeks ago by 141k • written 10 weeks ago by ▴ 10
1
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0
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1.3k
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News: First near-complete assembly of the bread wheat genome, *Triticum aestivum* - check data/compute resources used
wheat genome
updated 11 months ago by 43k • written 6.5 years ago by 141k
0
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0
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512
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News: New Datasets Available and Extension Announcement for the precisionFDA Truth Challenge V2
R
updated 10 months ago by 43k • written 4.0 years ago by ▴ 150
1
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157
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News: shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability terminal bash
7 weeks ago by David Langenberger 11k
0
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0
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769
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News: Course - Metabolomics: from study design to data analysis
Metabolomics R Bioconductor
updated 10 months ago by 43k • written 4.6 years ago by ★ 2.5k
2
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0
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2.0k
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News: Coding,data management and Shiny applications using RStudio for evolutionary biologists
coding data-management R shiny
updated 11 months ago by 43k • written 7.1 years ago by ▴ 110
0
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0
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630
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News: Call for hacking proposals: NBDC/DBCLS BioHackathon 2019
BioHackathon
updated 11 months ago by 43k • written 4.9 years ago by 161k
0
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0
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1.0k
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News: Data manipulation and visualization with Python
python Big-Data genomics
updated 11 months ago by 43k • written 5.5 years ago by ★ 2.5k
1
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0
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2.3k
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News: The power and promise of Genome-Wide Association Studies
Meta-analysis NGS GWAS Linux R
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
2
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0
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936
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News: R/Bioconductor for Mass Spectrometry and Proteomics course in Berlin
R Proteomics Bioconductor
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
3
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0
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1.0k
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News: Free online Ensembl course
webinar Ensembl mooc training online
updated 11 months ago by 43k • written 5.7 years ago by 23k
0
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0
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753
views
News: Cellosaurus release 34 is available
knowledgebase cell-line
updated 10 months ago by 43k • written 4.1 years ago by ▴ 120
1
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0
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894
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News: 7th Annual Mendelian Data Analysis Workshop - Learn bioinformatic tools for analysis of exome and genome sequence data for rare diseases.
sequence genome next-gen analysis
updated 11 months ago by 43k • written 5.1 years ago by ▴ 10
0
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0
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8.8k
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News: 2nd edition: Population Genomics course in Berlin. May 14-18 2018
Population-Genomics Plink R VCFtools
updated 11 months ago by 43k • written 6.6 years ago by ★ 2.5k
0
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0
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835
views
News: EMBL PhD programme applications open
phd embl
updated 11 months ago by 43k • written 4.6 years ago by 23k
0
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0
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794
views
News: Statistical Computing for Environmental Science with R and Rstudio
Rstudio online-course R-project statistics
updated 10 months ago by 43k • written 3.9 years ago by ▴ 70
2
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0
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849
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News: Bioinformatic courses in Canada (Quebec City) this September
Unix Genomics GWAS R Python
updated 11 months ago by 43k • written 4.8 years ago by ★ 2.5k
4
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0
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1.4k
views
News: ONLINE course - Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
next-gen-sequencing
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
0
votes
0
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820
views
News: Training course - Machine Learning in Berlin
Machine-Learning Python
updated 11 months ago by 43k • written 5.1 years ago by ★ 2.5k
1
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0
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2.2k
views
News: UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
swiss-prot uniprot taxonomy fasta
updated 11 months ago by 43k • written 6.4 years ago by ★ 2.4k
0
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0
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1.1k
views
News: Cambridge Bioinformatics Hackathon 2018
Machine-Learning Code-Fest Hackathon
updated 11 months ago by 43k • written 5.5 years ago by • 0
0
votes
0
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1.4k
views
News: Powerful and Intuitive Gene Expression Visualization Tools to Interpret Biological Signals---Bulk and Single Cell Data
scRNA-Seq webinar RNA-Seq single-cell
updated 11 months ago by 43k • written 5.5 years ago by ▴ 30
0
votes
0
replies
1.4k
views
News: eDNA Metabarcoding Workshop in Canada
R eDNA next-gen
updated 11 months ago by 43k • written 5.9 years ago by ★ 2.5k
0
votes
0
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399
views
News: RADseq data analysis course
RADseq Phylogenomics Stacks Population-Genomics
6 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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943
views
News: Comparative Genomics Workshop (Berlin, 1-5 October 2018)
snp assembly SV
updated 11 months ago by 43k • written 5.7 years ago by ★ 2.5k
0
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0
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496
views
News: Join Our Online Course: Incorporating Paleogenomes into Evolutionary Genomics Studies
Paleogenomics Genomics aDNA Adaptation-Genomics
updated 8 months ago by 43k • written 8 months ago by ★ 2.5k
900 results • Page 6 of 18
Recent Votes
Batch effects : ComBat or removebatcheffects (limma package) ?
How to input margin to UpsetR figure
Comment: How to assign cell types after integration in scRNA
NGS forensics: how to know if data is fabricated
Answer: ChIP-seq datasets: input samples omitted?
Comment: Help understanding how KEGG Ortholog `K00004 ` has 3 ECs associated with it (EC:
A: Deeptools plotHeatmap - Maintain Order of Input BED file
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Comment: Downloading full alignments from Pfam by GenoMax 141k
Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
> What does clipped Fastq mean? Probably means that NCBI has already scanned and trimmed adapter sequencers. > both forward and revers…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
You can use the default `adapters.fa` file included in the `resources` folder of [**BBMap suite**][1] (program to use is `bbduk.sh`) or a p…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
Only way to find out is to try. It may work but if it is not going to then you will find that out quick (process would likely crash because…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Also, there is no mention of adapter sequence so which adapter sequence should i use to remove it from some other reads?
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Also, Do you think i can reproduce at least most part of the data from the paper just on my laptop? It has 4 logical processors (Intel(R) C…
Comment: NGS forensics: how to know if data is fabricated by Philipp Bayer 8.3k
While I think this is an interesting case, I've before found cleaned 'raw' data on SRA. It happens: bioinformaticians receive the raw data,…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
1. What does clipped Fastq mean? both forward and reverse reads in the same file? 2. Why would you remove 2000bp contigs? I feel it will gi…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Well, I downloaded both the reads from-[LINK][1]. Thats all i did. Thats the only thing i need to do, right? I'l try spades. [1]: http…
Comment: How to assign cell types after integration in scRNA by Francesco ▴ 10
Thanks for the fast reply.. however i had only partially understood the answer. Is correct saying that low-representation integration and b…
Answer: Can I run cellassign on samples independently if there is batch effect present? by Francesco ▴ 10
Hi! Whenever you do make independent analysis or aggregate data and analyze them, most cell type assignment tools start from raw counts to …
Comment: gvcf joint calling by zihanss • 0
Thanks for your comment, I get it now.
Answer: ChIP-seq datasets: input samples omitted? by ATpoint 82k
In my hands (and from what I know based on many years here) inputs are almost exclusively used during peak calling to correct for loci-spec…
Comment: How to assign cell types after integration in scRNA by ATpoint 82k
No difference here. After all you typically want a label per cluster/group, so either subset to the control condition to do the assignment,…
Comment: Differential Expression using Isoseq-supplemented reference transcriptome by gaoanwei • 0
I found the question and ASK the GPT4 turbo
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