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1,000 results • Page
3 of 20
Sort: Rank
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Views
Votes
Replies
0
votes
0
replies
136
views
how to calculate TM-score to p-value?
tmscore
pdb
protein
structure
10 days ago by
Xylanaser
▴ 80
1
vote
0
replies
137
views
Reducing BWA mem seed length when a genome is highly heterozygous?
alignment
bwa
11 days ago by
Axzd
▴ 10
0
votes
2
replies
312
views
How to load a galaxy DESeq results table into R so I can continue my workflow there
r
RNA-seq
deseq2
9 days ago by
Nicolas
• 0
0
votes
1
reply
180
views
TCGAbiolinks MSI data
msi
updated 9 days ago by
bk11
★ 1.2k • written 11 days ago by
Elizabeth
▴ 10
0
votes
2
replies
256
views
Gene Ontology - How to do Transcript Ontology?
gene-ontology
GO
transcripts
updated 9 days ago by
Ram
40k • written 11 days ago by
Lakritz the LabRat
• 0
0
votes
11
replies
649
views
Normalization for microarrays >1000+ samples?
microarray
normalization
oligo
15 hours ago by
evmae
• 0
0
votes
0
replies
157
views
R crash when running leiden algorithm
seurat
updated 5 days ago by
Ram
40k • written 11 days ago by
Chris
▴ 180
0
votes
3
replies
315
views
RSubread DESeq2
RNA-seq
subread
differential-expression
deseq2
updated 2 days ago by
Ram
40k • written 11 days ago by
Beyza
• 0
0
votes
0
replies
145
views
Fastest way to find private SNPs for each sample
SNP
11 days ago by
Axzd
▴ 10
0
votes
0
replies
142
views
simuations with sim1000g
snps
simulation
sim1000G
chromosome
11 days ago by
Eliza
▴ 30
0
votes
2
replies
243
views
STAR mapping two pass mode for multiple samples with split steps or one step ?
STAR
RNA-seq
9 days ago by
octpus616
▴ 80
0
votes
1
reply
211
views
Any alternatives to DrugBank?
DrugBank
updated 11 days ago by
GenoMax
134k • written 12 days ago by
Clay
• 0
0
votes
0
replies
149
views
Coverage of domains
hmmer
protein
domains
12 days ago by
unknownunknown
• 0
0
votes
3
replies
314
views
Seeking Assistance for Interpreting a Network Representation on String-DB.org
gene-ontology
GO
enrichment
Proteome
stringdb
updated 12 days ago by
rfran010
▴ 790 • written 12 days ago by
Biomed-jeh
• 0
0
votes
1
reply
231
views
How to predict/annotate whether some type strains has a certain type of enzyme?
genome
gene
blast
annotation
updated 12 days ago by
GenoMax
134k • written 12 days ago by
JyiYeung
• 0
0
votes
0
replies
180
views
TCGAbiolinks not working anymore
R
TCGAbiolinks
GDC
updated 12 days ago by
Ram
40k • written 12 days ago by
master chief
• 0
0
votes
0
replies
170
views
weird TLEN
bowtie2
samtools
updated 12 days ago by
GenoMax
134k • written 12 days ago by
agreatgoodfellow
• 0
1
vote
1
reply
225
views
GISTIC CNV
Gistic
updated 12 days ago by
Ram
40k • written 12 days ago by
ananta.kapoor
• 0
0
votes
0
replies
177
views
ClusterProfiler EMAP plot - what are the annotations?
clusterprofiler
emap
updated 12 days ago by
Ram
40k • written 12 days ago by
fluentin44
• 0
0
votes
1
reply
196
views
Long read filtering based on reference
Long-read
ONT
updated 12 days ago by
Ram
40k • written 12 days ago by
Link
• 0
0
votes
2
replies
258
views
miRNAseq - over-presented sequence in negative control
miRNAseq
adaptor
dimer
9 days ago by
MH85
• 0
1
vote
1
reply
227
views
Some problem about heatmap of scRNA-seq
scRNA-seq
heatmap
updated 13 days ago by
LauferVA
3.7k • written 13 days ago by
feather-W
• 0
0
votes
3
replies
298
views
Not all variants are annotated with AF - expected or a problem?
Alignment
WGS
Calling
Variant
updated 12 days ago by
GenoMax
134k • written 13 days ago by
Luiz
▴ 30
1
vote
2
replies
286
views
Converting scMultiome data to loom using SEURAT
scMultiome
CCAF
Seurat
12 days ago by
halimaakhter014
• 0
0
votes
2
replies
275
views
Sentrix Array Genotyping
Illumina
13 days ago by
joo
• 0
0
votes
0
replies
163
views
Help with scvi error
scvi
updated 13 days ago by
Ram
40k • written 13 days ago by
Chris
▴ 180
0
votes
2
replies
243
views
Extract reference and alternate SNPs for different samples
vcftools
bcftools
SNPs
updated 13 days ago by
GenoMax
134k • written 13 days ago by
gubrins
▴ 270
0
votes
3
replies
365
views
Understanding the Impact of DNA Methylation on Gene Expression in Different Genomic Regions
methylation
EPICarray
7 days ago by
Irene
• 0
0
votes
1
reply
177
views
Merge microbiota data
microbiota
OTU
updated 13 days ago by
Ram
40k • written 13 days ago by
shamila.ismael
• 0
2
votes
5
replies
411
views
Dowload data from password protected cloud storage
data-transfer
wget
rclone
updated 13 days ago by
Joe
21k • written 13 days ago by
Paula
▴ 60
0
votes
1
reply
192
views
Counting Isoforms from Sam File
Samtools
updated 12 days ago by
Ram
40k • written 14 days ago by
serodyc
▴ 20
0
votes
0
replies
127
views
Partition reads in BAM file by MAG
metagenome
reads
BAM
MAG
14 days ago by
Gio
• 0
0
votes
0
replies
146
views
Help with single cell annotation
single-cell
updated 13 days ago by
Ram
40k • written 14 days ago by
Chris
▴ 180
0
votes
2
replies
228
views
Assigning GO ids to blast hits
Linux
GO
blast
13 days ago by
Mousumi Akter
• 0
0
votes
0
replies
115
views
valid pairs to .hic
HIC
14 days ago by
GK1610
▴ 110
0
votes
1
reply
168
views
PAML/codeml Poxvirus dN/dS
dNdS
codeml
selection
updated 13 days ago by
manaswwm
▴ 440 • written 14 days ago by
Adrian Pelin
★ 2.6k
2
votes
5
replies
330
views
Cluster annotation in single cell
Single-cell
updated 14 days ago by
Ram
40k • written 14 days ago by
synat.keam
▴ 80
0
votes
1
reply
163
views
Bowtie2 Error: reads file does not look like a FASTQ file
bowtie2
alignment
updated 14 days ago by
Ram
40k • written 14 days ago by
SO_Bio
• 0
0
votes
1
reply
168
views
Replace ambiguous characters in fasta MSA
maximum-likelihood
DNA
updated 13 days ago by
Joe
21k • written 14 days ago by
Alexandre
• 0
1
vote
1
reply
169
views
Any online course for learning how to use PLINK?
plink
updated 14 days ago by
bk11
★ 1.2k • written 14 days ago by
_quantum_girl_
▴ 10
0
votes
0
replies
115
views
Reverse complement only sequences resulted from BLASTN minus
DNA
fasta
bash
updated 14 days ago by
Ram
40k • written 14 days ago by
Oscar
▴ 30
0
votes
0
replies
122
views
Problem with BUSCO alignments: more than one set of sequences for the same locus
problem
phylogenomics
BUSCO
alignment
14 days ago by
silviaas
• 0
0
votes
0
replies
115
views
How to compare degradation rate or half-life
degradation-rate
half-life
updated 14 days ago by
Ram
40k • written 14 days ago by
g744695539
• 0
0
votes
2
replies
201
views
I am interested in creating bar graphs from the outcomes of my BLAST analysis
Blastn
updated 14 days ago by
Ram
40k • written 14 days ago by
hashim.rana11
▴ 20
0
votes
0
replies
117
views
OrthoPhy
orthophy
orthofinder
updated 14 days ago by
Ram
40k • written 14 days ago by
Lada
▴ 30
1
vote
4
replies
288
views
Gene expression
RNA-seq
DESeq2
Heatmap
updated 14 days ago by
ATpoint
76k • written 14 days ago by
Ralph
• 0
0
votes
0
replies
109
views
Molecular Docking, Sars-cov-2
Molecular-docking
updated 14 days ago by
Ram
40k • written 15 days ago by
frogfrapper
• 0
0
votes
0
replies
114
views
How to assemble bacterial genomes accounting for plasmids?
genome
assembly
bacteria
15 days ago by
marongiu.luigi
▴ 690
3
votes
5
replies
369
views
Ensembl site unresponsive in clusterProfiler analyses
parallell
clusterProfiler
R
updated 13 days ago by
manaswwm
▴ 440 • written 15 days ago by
enanoide
• 0
0
votes
1
reply
170
views
IPYRAD - Step 3
IPYRAD
updated 15 days ago by
Pierre Lindenbaum
156k • written 15 days ago by
Mariana
• 0
1,000 results • Page
3 of 20
Recent Votes
C: bowtie2 piped to samtools created many samtools.tmp.bam files, how to get the si
What is the difference between norm --multiallelics -any versus --atomize?
Answer: What is the difference between norm --multiallelics -any versus --atomize?
A: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
A: How to extract a sequence below a fasta header (">") from a fasta file ?
A: How to extract a sequence below a fasta header (">") from a fasta file ?
A: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
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even these measures will very often not fix the problem in the context of a problem of a problem of perfect separation such as OP describes.
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