1
vote
1
reply
133
views
0
votes
0
replies
128
views
1
vote
0
replies
126
views
updated 4 days ago by
Pierre Lindenbaum
161k
•
written 4 days ago by
sarumonsus
▴
10
0
votes
1
reply
123
views
0
votes
0
replies
121
views
5 days ago by
DGTool
•
0
0
votes
0
replies
118
views
4 days ago by
avigail.shnaider
•
0
1
vote
0
replies
118
views
0
votes
2
replies
118
views
0
votes
0
replies
117
views
0
votes
0
replies
116
views
updated 4 days ago by
Ram
43k
•
written 4 days ago by
sidrah.maryam
▴
50
0
votes
0
replies
115
views
2 days ago by
Omics data mining
▴
260
0
votes
1
reply
114
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
Lambodarswain316
•
0
0
votes
0
replies
112
views
0
votes
0
replies
110
views
0
votes
0
replies
110
views
0
votes
0
replies
110
views
0
votes
0
replies
109
views
4 days ago by
Scott McKay
▴
30
0
votes
0
replies
107
views
3 days ago by
analyst
▴
50
0
votes
0
replies
106
views
updated 2 days ago by
Ram
43k
•
written 2 days ago by
curious_butterfly
•
0
0
votes
1
reply
106
views
3
votes
1
reply
105
views
0
votes
0
replies
104
views
4 days ago by
piotto
▴
20
0
votes
0
replies
101
views
updated 4 days ago by
Ram
43k
•
written 4 days ago by
arshad1292
▴
100
0
votes
0
replies
100
views
0
votes
1
reply
100
views
0
votes
0
replies
99
views
3 days ago by
kyj222637
•
0
0
votes
1
reply
98
views
updated 6 hours ago by
Ram
43k
•
written 17 hours ago by
carolofharvest
▴
40
1
vote
3
replies
97
views
0
votes
0
replies
97
views
0
votes
0
replies
94
views
0
votes
0
replies
94
views
3 days ago by
synat.keam
▴
100
0
votes
0
replies
85
views
0
votes
0
replies
83
views
0
votes
0
replies
83
views
0
votes
1
reply
82
views
0
votes
0
replies
79
views
1 day ago by
RT
▴
10
0
votes
1
reply
78
views
updated 16 hours ago by
GenoMax
142k
•
written 16 hours ago by
maria.soler
•
0
0
votes
0
replies
73
views
0
votes
1
reply
71
views
updated 6 hours ago by
Ram
43k
•
written 6 hours ago by
rackbersingh
•
0
0
votes
0
replies
68
views
0
votes
0
replies
64
views
updated 19 hours ago by
zx8754
11k
•
written 21 hours ago by
Lambodarswain316
•
0
0
votes
0
replies
64
views
23 hours ago by
jain72744
▴
10
0
votes
0
replies
62
views
0
votes
0
replies
59
views
updated 6 hours ago by
Ram
43k
•
written 13 hours ago by
naomiboldon
•
0
0
votes
0
replies
53
views
10 hours ago by
beantkapoor16
•
0
0
votes
0
replies
10
views
1 hour ago by
Christopher
•
0
Recent Votes
Recent Locations •
All
United States, 4 minutes ago
United States, 7 minutes ago
United States, 12 minutes ago
United States, 23 minutes ago
China, 24 minutes ago
Singapore, 34 minutes ago
United States, 35 minutes ago
Recent Awards •
All
Popular Question to
octpus616
▴
100
Popular Question to
turcoa1
•
0
Scholar to
chrchang523
10k
Popular Question to
Lélé
•
0
Commentator to
dthorbur
★
1.9k
Popular Question to
maria.soler
•
0
Popular Question to
melissachua90
▴
70
Recent Replies
Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
use bcftools merge with --force-samples and then use jvarkit https://jvarkit.readthedocs.io/en/latest/VcfFilterJdk/ to replace the no-call …
Answer: In IGV is this a heterogeneous mutation or false call?
by
swbarnes2
14k
Since all the reads that show the alternate allele have to be clipped to align there, I'd say those reads are misaligned. I would say that…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
> Here's a few lines from the head of the raw fastq
If your files are actually compressed (as their names suggest) then you should not be …
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
If you added the `\` before the `+` then there is no need for it. It makes it appear that the sequences are not in proper fastq format. Ple…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
Mensur Dlakic
★
27k
This seems to be the same unanswered question as before, except that its description is split over two threads. You are now forcing us to r…
Answer: what is another word for a BLAST "hit"?
by
dec986
▴
380
I'll probably go with "matches" even though it doesn't sound as good as just "hit"
Comment: what is another word for a BLAST "hit"?
by
Pierre Lindenbaum
161k
> is there a synonym for hits from BLAST?
alignment
Comment: How are score_weights calculated in this code?
by
Ram
43k
Is this ALL the context you can give us?
Comment: Genome Assembly task + Protein Translation, assignment advice on a question
by
Ram
43k
Where did you copy-paste this from? It looks like an assignment question.
Comment: Contig assembly task, errors
by
rackbersingh
•
0
Hi Phillip,
Thanks for sharing you knowledge and funnily enough this really was an amplitude test, but anyways your sharing of knowledge h…
Comment: Can I readmap short reads to rDNA references?
by
GenoMax
142k
If these are short reads and the organisms are related then you are going to have a difficult time classifying the reads.
Comment: extract viral protein of interest from 10k whole viral genomes
by
GenoMax
142k
With a large dataset it is always best to do the search locally (or in the cloud, if you don't have necessary hardware available locally).
Comment: Truncated metadata file report from ENA Portal API
by
Giulia
•
0
Thank you so much for your hint! I'll look into this!
Comment: How to convert Haps file to vcf file?
by
curious
▴
750
unzip haps then:
bin/shapeit \
-convert \
--input-haps {haps_prefix} \
--thread {cpus} \
--output-…
Traffic: 1446 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6