updated 9 hours ago by
dimpleadiwal050896
•
0
•
written 4.9 years ago by
ggman
▴
90
1
vote
6
replies
2.8k
views
0
votes
9
replies
2.5k
views
6 follow
4
votes
9
replies
2.1k
views
3 hours ago by
anna
▴
20
2
votes
5
replies
915
views
2
votes
9
replies
850
views
0
votes
11
replies
529
views
0
votes
0
replies
505
views
0
votes
1
reply
481
views
updated 4 days ago by
ginellegrenier
•
0
•
written 4 months ago by
Clayton
•
0
0
votes
6
replies
447
views
1
vote
7
replies
358
views
updated 6 hours ago by
Ram
43k
•
written 7 days ago by
marco.barr
▴
80
0
votes
7
replies
343
views
1
vote
3
replies
337
views
0
votes
5
replies
337
views
updated 4 days ago by
GenoMax
141k
•
written 5 days ago by
Bertalan_Takacs
▴
90
0
votes
5
replies
333
views
updated 2 days ago by
Istvan Albert
100k
•
written 5 days ago by
sehriban.buyukkilic
▴
10
0
votes
5
replies
324
views
0
votes
3
replies
308
views
0
votes
0
replies
305
views
2
votes
4
replies
295
views
0
votes
3
replies
282
views
1
vote
3
replies
274
views
5 days ago by
Art1ess
•
0
2
votes
2
replies
260
views
updated 5 days ago by
Ram
43k
•
written 6 days ago by
v.berriosfarias
▴
140
1
vote
3
replies
251
views
0
votes
2
replies
248
views
1
vote
3
replies
235
views
1
vote
2
replies
228
views
4 days ago by
ahmad.sajad4541
•
0
0
votes
1
reply
211
views
updated 4 days ago by
ATpoint
82k
•
written 4 days ago by
AaronJaime
•
0
0
votes
0
replies
191
views
1
vote
1
reply
175
views
0
votes
0
replies
170
views
0
votes
1
reply
166
views
0
votes
0
replies
167
views
0
votes
1
reply
167
views
updated 12 hours ago by
christopher medway
▴
450
•
written 21 hours ago by
Tigran
•
0
0
votes
1
reply
164
views
updated 6 days ago by
bk11
★
2.4k
•
written 6 days ago by
alphaflylizard
•
0
0
votes
0
replies
164
views
0
votes
0
replies
162
views
1
vote
0
replies
162
views
3
votes
7
replies
159
views
0
votes
0
replies
155
views
0
votes
1
reply
155
views
updated 5 days ago by
Sofia
•
0
•
written 5 days ago by
mawigoj318
•
0
0
votes
1
reply
155
views
updated 5 days ago by
Mensur Dlakic
★
27k
•
written 5 days ago by
benguyarenbeyaz98
•
0
2
votes
2
replies
154
views
0
votes
1
reply
151
views
updated 6 days ago by
bk11
★
2.4k
•
written 6 days ago by
Susmita Mandal
▴
110
0
votes
0
replies
151
views
4 days ago by
Emily
▴
10
0
votes
0
replies
150
views
4 days ago by
synat.keam
▴
100
1
vote
0
replies
148
views
0
votes
0
replies
148
views
0
votes
0
replies
146
views
0
votes
0
replies
145
views
0
votes
0
replies
141
views
5 days ago by
salias
•
0
0
votes
0
replies
138
views
updated 5 days ago by
Ram
43k
•
written 5 days ago by
glaciya2018
•
0
Recent Votes
Recent Locations •
All
United States, just now
Cardiff, UK, just now
UCLA, 1 minute ago
United States, 1 minute ago
Japan, 2 minutes ago
United Kingdom, 3 minutes ago
Colombia, 3 minutes ago
Recent Awards •
All
Popular Question to
elcortegano
▴
200
Scholar to
christopher medway
▴
450
Popular Question to
cwwong13
▴
40
Popular Question to
v.berriosfarias
▴
140
Popular Question to
scarey
•
0
Scholar to
e.r.zakiev
▴
200
Popular Question to
Bine
▴
60
Recent Replies
Comment: Differential Accessibility
by
Ram
43k
Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the cod…
Comment: Extract protein sequence
by
anna
▴
20
Thank you! I need this for eukaryotic organism and known protein sequences, but I guess seqkit would work well!
Comment: Landmark gene selection in L1000.
by
GenoMax
141k
Paper referred to in question: https://pubmed.ncbi.nlm.nih.gov/29195078/
> so I want to understand how you reduced the 12063 genes to 978…
Comment: Batch effects : ComBat or removebatcheffects (limma package) ?
by
cwwong13
▴
40
@kevin May I know whether your comments and edits were mainly based on the fact that "Previously, [crazy] people had been using the origina…
Comment: Programmatically retrieving positions of protein active site residues
by
Wayne
★
2.0k
Wow, I was shocked at this AI answer that looks to be a good start for using UniProt. Sharing it in case it is useful. (It will work in ses…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
570
> Can you clarify what you mean by "100% of reads pass cutadapt, even
> though 70% of reads contain adapters and get trimmed.
The header o…
Comment: Software to separate reads from different individuals
by
GenoMax
141k
If you have independent information available (e.g. genotype data for both individuals) then you *may* be able to assign reads based on the…
Answer: Extract protein sequence
by
Matthias Zepper
4.5k
You didn't mention what kind of organism you are working with and what kind of protein you are looking for?
If it happens to be a microbia…
Comment: How to use limma to find differentially expressed genes in response to a continu
by
pairedttest
▴
10
Thank you Gordon for your expertise. One question that I have now that I have a list of DE genes is how to interpret logFC of this continuo…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
•
0
Yes I plan to use QIIME2, but I'm Cutadapting outside QIIME so its easier to MultiQC without importing/unzipping QZAs (and QIIME2 importing…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
GenoMax
141k
> 3' adapters were removed aprox. 90 times each one, so there sohuld not be read-through at all here
Then you have data that has poor Q sc…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
•
0
Following your advice, I checked the primer and adapters sequences and edited the question accordingly
Comment: How should I make kallisto indexes?
by
dsull
★
5.9k
We can't phase them out per se, because ``kallisto index`` is still the engine responsible for creating the index under the hood (and there…
Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
by
Medhat
9.7k
"./." in your gVCF files typically indicates a lack of information or uncertainty about the genotype at that particular position.
This co…
Traffic: 2880 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6