User: seta

1

vote

2

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908

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Association analysis releatedness package/tool

updated 5.1 years ago by Lemire ▴ 940 • written 5.1 years ago by seta ★ 1.9k

8

votes

6

replies

4.1k

views

VEP Ensembl annotation

updated 5.2 years ago by Emily 24k • written 5.2 years ago by seta ★ 1.9k

0

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0

replies

646

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intergenic SNP annotation gene distance

5.3 years ago by seta ★ 1.9k

1

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4

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1.1k

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VEP ensembl whole genome sequencing

5.3 years ago by seta ★ 1.9k

0

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0

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1.4k

views

VCF4.1 VCF4.2 merge bcftools

5.3 years ago by seta ★ 1.9k

6

votes

2

replies

2.6k

views

bcftools VCF

updated 2.0 years ago by Ram 45k • written 5.3 years ago by seta ★ 1.9k

8

votes

12

replies

11k

views

7 follow

fasta sequence

updated 2.0 years ago by Ram 45k • written 9.5 years ago by seta ★ 1.9k

0

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8

replies

1.5k

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vcf whole genome normalization bcftools

5.3 years ago by seta ★ 1.9k

0

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5

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3.4k

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vcf bcftools vcftools

5.3 years ago by seta ★ 1.9k

4

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2

replies

2.6k

views

merging VCF whole genome

updated 5.4 years ago by Pierre Lindenbaum 165k • written 5.4 years ago by seta ★ 1.9k

0

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5

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1.4k

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PGDspider Genepop

updated 20 months ago by Ram 45k • written 5.7 years ago by seta ★ 1.9k

0

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3

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1.5k

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SKAT association analysis common rare variant

updated 5.6 years ago by Kevin Blighe 89k • written 5.6 years ago by seta ★ 1.9k

1

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5

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3.3k

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blast alignment sequencing RNA-Seq Assembly

updated 2.4 years ago by Ram 45k • written 9.7 years ago by seta ★ 1.9k

0

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1

reply

2.3k

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Fst population genetic

5.7 years ago by seta ★ 1.9k

0

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3

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1.3k

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bedtools nearest gene GTF

5.7 years ago by seta ★ 1.9k

0

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0

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997

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lncRNA miRNA intraction Rat

5.7 years ago by seta ★ 1.9k

0

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2

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1.5k

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genome random SNP vcf

5.7 years ago by seta ★ 1.9k

12

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10

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8.4k

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genotype removing vcf

updated 5.8 years ago by finswimmer 16k • written 5.8 years ago by seta ★ 1.9k

0

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7

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2.1k

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insert size BWA genome sequencing

5.8 years ago by seta ★ 1.9k

0

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19

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11k

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whole genome bwa paired end sequencing

5.8 years ago by seta ★ 1.9k

1

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4

replies

1.5k

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gene Biomart ID Ensembl

updated 3.8 years ago by Ram 45k • written 5.8 years ago by seta ★ 1.9k

1

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2

replies

1.9k

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BWA alignment IGV

updated 5.8 years ago by swbarnes2 14k • written 5.8 years ago by seta ★ 1.9k

0

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1

reply

1.5k

views

samtools merge BAM

updated 5.8 years ago by Devon Ryan 105k • written 5.8 years ago by seta ★ 1.9k

1

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3

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2.9k

views

VCF merge bcftools

updated 5.8 years ago by husensofteng ▴ 410 • written 5.8 years ago by seta ★ 1.9k

0

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1

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983

views

allele frequency random SNP population genetic

5.9 years ago by seta ★ 1.9k

0

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10

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4.3k

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HLA genome sequencing visualization

updated 5.9 years ago by Kevin Blighe 89k • written 5.9 years ago by seta ★ 1.9k

3

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6

replies

1.5k

views

VEP human Ensembl

updated 5.9 years ago by Emily 24k • written 5.9 years ago by seta ★ 1.9k

0

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0

replies

784

views

derived allele genomics positive selection

5.9 years ago by seta ★ 1.9k

19

votes

3

replies

8.4k

views

SNP variant strand genome

updated 5.9 years ago by Emily 24k • written 5.9 years ago by seta ★ 1.9k

0

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0

replies

1.2k

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derived allele genetic population differentiation

6.0 years ago by seta ★ 1.9k

7

votes

6

replies

4.1k

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variant

updated 2.8 years ago by nynyny0112 • 0 • written 6.0 years ago by seta ★ 1.9k

3

votes

5

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2.4k

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analysis edgeR batch-effect DE

updated 11 months ago by Ram 45k • written 6.0 years ago by seta ★ 1.9k

7

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6

replies

3.4k

views

VEP stop gain ensembl

updated 6.0 years ago by zx8754 12k • written 6.4 years ago by seta ★ 1.9k

0

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0

replies

2.4k

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Fst Manhattan plot z-score

6.1 years ago by seta ★ 1.9k

0

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0

replies

1.3k

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derived allele population vcf

6.1 years ago by seta ★ 1.9k

0

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1

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6.0k

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Fst vcftools populations

6.1 years ago by seta ★ 1.9k

2

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5

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5.3k

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vcf ID column edit manipulation

6.1 years ago by seta ★ 1.9k

5

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5

replies

9.6k

views

differentially expressed gene KEGG pathway

updated 6.1 years ago by nsmaan ▴ 10 • written 8.8 years ago by seta ★ 1.9k

2

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2

replies

2.6k

views

quality control 1000 genome vcf

updated 6.1 years ago by Kevin Blighe 89k • written 6.1 years ago by seta ★ 1.9k

3

votes

9

replies

8.6k

views

vcf bcftools normalize

updated 2.0 years ago by Ram 45k • written 6.2 years ago by seta ★ 1.9k

0

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0

replies

924

views

blood group prediction haplotype NGS

6.2 years ago by seta ★ 1.9k

0

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3

replies

2.2k

views

Fst 1000 genome population

updated 6.2 years ago by cetin.m ▴ 50 • written 6.2 years ago by seta ★ 1.9k

1

vote

7

replies

2.7k

views

variant calling genome sequencing VCF

updated 6.3 years ago by zx8754 12k • written 6.9 years ago by seta ★ 1.9k

5

votes

6

replies

3.3k

views

genome annotation gatk4 bcftools vcf

updated 6.3 years ago by zx8754 12k • written 6.5 years ago by seta ★ 1.9k

0

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1

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1.4k

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Eagle Phasing vcf

updated 6.3 years ago by zx8754 12k • written 6.3 years ago by seta ★ 1.9k

0

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2

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3.7k

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allele frequency population Fst

updated 6.3 years ago by paolo002 ▴ 160 • written 6.4 years ago by seta ★ 1.9k

0

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5

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2.1k

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SNP plotting population

updated 6.3 years ago by Kevin Blighe 89k • written 6.3 years ago by seta ★ 1.9k

1

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5

replies

6.5k

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allele frequency population Fisher's exact test

6.4 years ago by seta ★ 1.9k

0

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1

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1.2k

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alt allele count 1000 genome

updated 6.4 years ago by Ram 45k • written 6.4 years ago by seta ★ 1.9k

2

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8

replies

2.5k

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GENCODE genomic-coordinates GTF

updated 2.0 years ago by Ram 45k • written 6.4 years ago by seta ★ 1.9k