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3
votes
2
replies
1.2k
views
how many bp of barcode and UMI
RNA-Seq
4.2 years ago by yueli7 ▴ 250
3
votes
2
replies
853
views
what is the definition of "cell barcode collapsing"
RNA-Seq
updated 4.2 years ago by 104k • written 4.2 years ago by ▴ 250
1
vote
1
reply
2.5k
views
no matrix.mtx.gz in cellranger output
RNA-Seq
4.2 years ago by yueli7 ▴ 250
1
vote
11
replies
1.2k
views
Filezilla to dowload fastqc
RNA-Seq
4.3 years ago by yueli7 ▴ 250
5
votes
7
replies
3.9k
views
install bcl2fastq
RNA-Seq
updated 4.3 years ago by 142k • written 4.3 years ago by ▴ 250
0
votes
9
replies
2.3k
views
configure of bcl2fastq
RNA-Seq
4.3 years ago by yueli7 ▴ 250
9
votes
27
replies
4.3k
views
problem in install cellranger
RNA-Seq
updated 4.3 years ago by ▴ 1000 • written 4.3 years ago by ▴ 250
0
votes
2
replies
1.6k
views
In .get_cds_IDX(mcols0$type, mcols0$phase)
RNA-Seq R
updated 4.3 years ago by 11k • written 4.3 years ago by ▴ 250
1
vote
7
replies
3.4k
views
Could not locate a Bowtie index corresponding to basename "mm9"
RNA-Seq
4.4 years ago by yueli7 ▴ 250
0
votes
2
replies
828
views
How I can get the UMI extraction file
RNA-Seq
4.4 years ago by yueli7 ▴ 250
4
votes
19
replies
3.0k
views
problem in install UMI_tools
RNA-Seq
4.4 years ago by yueli7 ▴ 250
0
votes
2
replies
598
views
get the barcode file
RNA-Seq
updated 4.4 years ago by 104k • written 4.4 years ago by ▴ 250
0
votes
0
replies
2.0k
views
Error in setnames(x, value) : Can't assign 2 names to a 0 column data.table
RNA-Seq
4.4 years ago by yueli7 ▴ 250
5
votes
4
replies
2.4k
views
the usage of fastq-dump
RNA-Seq
4.4 years ago by yueli7 ▴ 250
3
votes
3
replies
1.8k
views
zUMIs software usage
RNA-Seq
4.4 years ago by yueli7 ▴ 250
5
votes
5
replies
918
views
name of the figure
RNA-Seq
updated 4.4 years ago by ★ 2.7k • written 4.4 years ago by ▴ 250
2
votes
1
reply
1.4k
views
error in mat2csv ValueError: Shape of passed values is (4926, 33694), indices imply (4926, 30585)
RNA-Seq
4.4 years ago by yueli7 ▴ 250
1
vote
1
reply
1.0k
views
mat2csv IOError: Not a valid path to a feature-barcode mtx directory: '/home/li/tmp'
RNA-Seq
4.4 years ago by yueli7 ▴ 250
3
votes
4
replies
5.0k
views
problem in install cellranger
RNA-Seq
4.5 years ago by yueli7 ▴ 250
8
votes
10
replies
9.0k
views
mat2csv matrix to csv
RNA-Seq
4.5 years ago by yueli7 ▴ 250
1
vote
3
replies
2.6k
views
Seurat nFeature_RNA filter number in human
RNA-Seq
4.5 years ago by yueli7 ▴ 250
0
votes
4
replies
2.7k
views
question about seurat figure PC_heatmap
RNA-Seq
updated 4.5 years ago by ★ 16k • written 4.5 years ago by ▴ 250
2
votes
2
replies
805
views
question ablout seurat figure PC_contribution
RNA-Seq
updated 4.5 years ago by 88k • written 4.5 years ago by ▴ 250
2
votes
2
replies
705
views
protein pathway analysis software or tools
genome
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by ▴ 250
4
votes
5
replies
2.0k
views
pseudocount of dataset
RNA-Seq
4.5 years ago by yueli7 ▴ 250
5
votes
6
replies
2.1k
views
GSEA Must be finite.
RNA-Seq
updated 4.5 years ago by ★ 1.5k • written 4.5 years ago by ▴ 250
5
votes
6
replies
1.5k
views
the gtf file for cow
RNA-Seq
4.6 years ago by yueli7 ▴ 250
12
votes
8
replies
1.1k
views
6 follow
demographic of people
RNA-Seq
updated 4.6 years ago by 20 • written 4.8 years ago by ▴ 250
0
votes
4
replies
1.0k
views
protein binding sites
gene
written 4.8 years ago by ▴ 250
2
votes
7
replies
1.0k
views
software to draw the picture
software
4.8 years ago by yueli7 ▴ 250
2
votes
4
replies
1.3k
views
differential express of RNA seq
RNA-Seq
updated 4.8 years ago by 20 • written 6.0 years ago by ▴ 250
5
votes
3
replies
1.6k
views
combine two RNA-seq files together
RNA-Seq
4.9 years ago by yueli7 ▴ 250
4
votes
6
replies
3.2k
views
peaks in IGV
ChIP-Seq
4.9 years ago by yueli7 ▴ 250
0
votes
1
reply
968
views
Build signal track
ChIP-Seq
4.9 years ago by yueli7 ▴ 250
0
votes
6
replies
3.0k
views
convert *.bdg file to *.bw file
ChIP-Seq
4.9 years ago by yueli7 ▴ 250
1
vote
3
replies
2.1k
views
chip-seq visualize tool IGV
ChIP-Seq
4.9 years ago by yueli7 ▴ 250
5
votes
7
replies
1.0k
views
"webdir" must be set to something
ChIP-Seq
updated 4.9 years ago by 82k • written 4.9 years ago by ▴ 250
3
votes
3
replies
1.3k
views
th usage of makebigwig.pl
ChIP-Seq
updated 4.9 years ago by 43k • written 4.9 years ago by ▴ 250
3
votes
8
replies
1.4k
views
homer makebigwig error
ChIP-Seq homer
updated 4.9 years ago by 82k • written 4.9 years ago by ▴ 250
5
votes
5
replies
1.2k
views
program repair in featureCounts
RNA-Seq
updated 5.4 years ago by 20 • written 6.0 years ago by ▴ 250
1
vote
3
replies
2.0k
views
the expression of miRNA in ucsc genome browser
gene ucsc expression cancer miRNA
updated 5.7 years ago by ▴ 20 • written 5.9 years ago by ▴ 250
0
votes
3
replies
3.8k
views
circRNA database of TCGA
gene
updated 5.8 years ago by 7.5k • written 5.8 years ago by ▴ 250
0
votes
2
replies
875
views
degree of genes
gene
5.8 years ago by yueli7 ▴ 250
5
votes
2
replies
1.1k
views
software that can draw this figure
genome
updated 5.8 years ago by 142k • written 5.8 years ago by ▴ 250
2
votes
3
replies
2.1k
views
normal sample of ovarian cancer in TCGA dataset
RNA-Seq
updated 5.8 years ago by 88k • written 5.8 years ago by ▴ 250
1
vote
1
reply
1.5k
views
miRNA TCGA expression
gene
updated 5.9 years ago by 43k • written 5.9 years ago by ▴ 250
2
votes
4
replies
1.1k
views
median value of kmplot
gene
5.9 years ago by yueli7 ▴ 250
3
votes
1
reply
1.1k
views
software of duplicates in RNA-seq data
RNA-Seq
updated 6.0 years ago by 13k • written 6.0 years ago by ▴ 250
3
votes
5
replies
1.9k
views
download human mRNA
genome
updated 6.0 years ago by ★ 2.4k • written 6.0 years ago by ▴ 250
1
vote
2
replies
3.2k
views
GSEA error listing Broad website
software error
6.0 years ago by yueli7 ▴ 250
111 results • Page 2 of 3
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