Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
0
votes
0
replies
174
views
Consistent somatic CNV calling across samples: spurious, error or real?
MANTA
CNVKit
SV
somatic
CNV
updated 9 weeks ago by
GenoMax
146k • written 9 weeks ago by
avelarbio46
▴ 30
0
votes
2
replies
341
views
Adding a simple tag to VCF Info column
vcf
updated 4 months ago by
Ram
44k • written 4 months ago by
avelarbio46
▴ 30
3
votes
1
reply
301
views
Intersection of multiple vcf files
isec
vcf
bcftools
updated 4 months ago by
Jeremy Leipzig
22k • written 4 months ago by
avelarbio46
▴ 30
0
votes
11
replies
1.2k
views
Filtering VCF based on codon-transcript
vcf
bcftools
updated 6 months ago by
barslmn
★ 2.3k • written 7 months ago by
avelarbio46
▴ 30
0
votes
0
replies
280
views
Calculate mean DP4 in a multisample vcf
dp4
vcf
bcftools
updated 8 months ago by
Ram
44k • written 8 months ago by
avelarbio46
▴ 30
0
votes
0
replies
382
views
Adding custom annotation to VEP output VCF
bcftools
VEP
vcf
12 months ago by
avelarbio46
▴ 30
4
votes
4
replies
831
views
Filtering VCF to divide with equal sizes
bcftools
vcf
updated 12 months ago by
Ram
44k • written 12 months ago by
avelarbio46
▴ 30
5
votes
12
replies
2.2k
views
Converting custom VCF to standard VCF
VCF
13 months ago by
avelarbio46
▴ 30
1
vote
4
replies
1.0k
views
Finding Unique values on specific INFO field of the VCF file (dbNSFP, vep annotated multisample VCF)
bcftools
filter
vep
vcf
13 months ago by
avelarbio46
▴ 30
1
vote
3
replies
1.6k
views
Converting dbSNP VCF to work with RefSeq chromossome ID
NCBI
dbSNP
RefSeq
updated 14 months ago by
onter
▴ 170 • written 19 months ago by
avelarbio46
▴ 30
1
vote
1
reply
1.1k
views
Filtering VCF by specific tag in INFO field
bcftools
vcf
updated 15 months ago by
Ram
44k • written 19 months ago by
avelarbio46
▴ 30
5
votes
2
replies
1.7k
views
How to create a new gene signature from RNAseq data
gene
RNAseq
signature
updated 2.2 years ago by
ATpoint
85k • written 2.2 years ago by
avelarbio46
▴ 30
0
votes
1
reply
816
views
Filtering VCF variants based on txt file with variants CHROM, POS and ID
VCF
updated 2.4 years ago by
Ram
44k • written 2.4 years ago by
avelarbio46
▴ 30
0
votes
1
reply
968
views
Running STAR-SEQR with star outputs
STAR-SEQR
STAR
fusion
RNAseq
updated 3.1 years ago by
GenoMax
146k • written 3.1 years ago by
avelarbio46
▴ 30
0
votes
1
reply
834
views
GSEA and over-representation analysis of many genes
GSEA
DE
ORA
RNAseq
updated 2.8 years ago by
bookorg
▴ 10 • written 3.2 years ago by
avelarbio46
▴ 30
1
vote
1
reply
1.1k
views
How can I compare the similarities of two transcriptomes?
transcriptome
similarity
rnaseq
updated 3.3 years ago by
Pratik
★ 1.0k • written 3.3 years ago by
avelarbio46
▴ 30
2
votes
6
replies
2.1k
views
Can't count features with featurecount
RNAseq
featurecounts
3.4 years ago by
avelarbio46
▴ 30
9
votes
11
replies
3.8k
views
Bash loop for bbduk
bash
bbduk
updated 3.5 years ago by
cpad0112
21k • written 3.5 years ago by
avelarbio46
▴ 30
0
votes
3
replies
1.3k
views
Removing batch effects
batch-effect
RNA-Seq
updated 3.6 years ago by
swbarnes2
14k • written 3.6 years ago by
avelarbio46
▴ 30
0
votes
4
replies
1.5k
views
STAR-fusion on galaxy
Galaxy
RNA-Seq
STAR-fusion
3.7 years ago by
avelarbio46
▴ 30
2
votes
1
reply
724
views
Gene size correction for small RNA
small RNA
miRNA
RNA-Seq
normalization
updated 3.7 years ago by
dsull
★ 6.9k • written 3.7 years ago by
avelarbio46
▴ 30
2
votes
2
replies
1.3k
views
How to trim reads when I'm not sure where they are?
RNA-Seq
cutadapt
illumina
updated 3.7 years ago by
shelkmike
★ 1.3k • written 3.7 years ago by
avelarbio46
▴ 30
25
votes
13
replies
3.9k
views
6 follow
Best ubuntu version for bioinformatics?
ubuntu
updated 3.8 years ago by
Mensur Dlakic
★ 28k • written 3.8 years ago by
avelarbio46
▴ 30
3
votes
10
replies
2.4k
views
Small RNAseq Dataset to test scripts
RNA-Seq
rna-seq
updated 3.8 years ago by
Qiongyi
▴ 180 • written 3.8 years ago by
avelarbio46
▴ 30
0
votes
0
replies
1.2k
views
Galaxy workflow concatenate
Galaxy
workflow
fastqc
multiqc
4.0 years ago by
avelarbio46
▴ 30
1
vote
1
reply
615
views
RNAseq more sequences than reads after mapping
RNA-Seq
mapping
reads
4.0 years ago by
avelarbio46
▴ 30
0
votes
6
replies
1.2k
views
List of genes with common false-positives
NGS
False-positive
updated 4.9 years ago by
Biostar
20 • written 5.0 years ago by
avelarbio46
▴ 30
2
votes
2
replies
1.7k
views
Pooling samples for RNA
RNA-Seq
Cancer
Illumina
Pool
5.4 years ago by
avelarbio46
▴ 30
28 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6