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121,401 results • Page
10 of 2429
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Votes
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0
votes
1
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429
views
PAUP* error with exporting result file
PAUP
SVDquartet
updated 7 weeks ago by
Mark
★ 1.6k • written 8 weeks ago by
ylkim9
• 0
0
votes
1
reply
427
views
I need to convert Axiom output to PLINK format I did not find annotation.db
Axiom
PLINK
apt-format-result
updated 8 weeks ago by
GenoMax
152k • written 8 weeks ago by
AlmuhayyaA
• 0
1
vote
3
replies
574
views
How to merge heterogeneously normalized RNA-seq datasets for meta-analysis?
normalization
rna-seq
updated 7 weeks ago by
ATpoint
88k • written 8 weeks ago by
pipelinfections
• 0
1
vote
1
reply
477
views
Tool:
I packaged some tools in python pypi for Windows (fastqc, bowtie2, samtools)
python
pypi
updated 7 weeks ago by
Dunois
★ 2.9k • written 8 weeks ago by
Cris
▴ 10
0
votes
4
replies
658
views
Transcript ID
id
transcript
updated 7 weeks ago by
Arup Ghosh
3.3k • written 8 weeks ago by
cheong
• 0
0
votes
2
replies
502
views
Galaxy + RStudio
R
RNA-seq
RStudio
updated 7 weeks ago by
Mark
★ 1.6k • written 8 weeks ago by
justus
• 0
8
votes
18
replies
3.5k
views
8 follow
How to limit fasta header to 40 characters?
unix
seqkit
fasta
updated 8 weeks ago by
jena
▴ 330 • written 21 months ago by
fishingline37
• 0
1
vote
2
replies
518
views
Transcript level quantification and gene length scaling for rRNA depleted libraries
RNASeq
updated 8 weeks ago by
dsull
★ 7.6k • written 8 weeks ago by
marc.zimmerli
▴ 10
0
votes
0
replies
368
views
Model diagnostics for GAM (Generalised Additive Model)
gam
mgcv
generalized-additive-model
8 weeks ago by
Tuấn Anh
• 0
2
votes
5
replies
1.1k
views
Forum:
Small‑Lab Data Management & Analytics Tool – What are your biggest pain points?
biotech
startup
updated 8 weeks ago by
Darked89
4.7k • written 8 weeks ago by
Novoo
▴ 10
1
vote
1
reply
462
views
landscape of RNA types and their functions/ scRNA
transcriptomics
scRNA
biology
updated 8 weeks ago by
ATpoint
88k • written 8 weeks ago by
Ariadna
▴ 20
4
votes
7
replies
871
views
Is vg toolkit suitable for haplotype calling?
pangenome
haplotype
vg
updated 8 weeks ago by
Jordan M Eizenga
▴ 740 • written 8 weeks ago by
Pau
• 0
0
votes
0
replies
337
views
Dfam annotations
dfam
8 weeks ago by
frarodmar17
• 0
0
votes
3
replies
673
views
miRNA alignment and count generation
aligment
Mapping
Bowtie
miRNAs
updated 8 weeks ago by
i.sudbery
21k • written 8 weeks ago by
omicon
▴ 40
1
vote
2
replies
438
views
Cytoscape Node Size Mapping
Cytoscape
8 weeks ago by
William
▴ 20
1
vote
2
replies
536
views
Deeptools: Custom gcbias plots in R possible?
computegcbias
deeptools
8 weeks ago by
RJDan
• 0
0
votes
3
replies
1.1k
views
HOMER Motif Analysis-- homer2 error
rna-seq
homer
updated 8 weeks ago by
ATpoint
88k • written 16 months ago by
HypoGG
• 0
4
votes
0
replies
451
views
Herald:
The Biostar Herald for Monday, April 21, 2025
herald
8 weeks ago by
Biostar
3.6k
0
votes
4
replies
544
views
Forum:
ELISA‑Focused Lab Management & Analysis App – Would You Use It?
biotech
startup
updated 8 weeks ago by
Ram
45k • written 8 weeks ago by
Novoo
▴ 10
0
votes
0
replies
439
views
Job:
Research Fellow in Cancer Evolution (Deadline 30 Apr 2025)
Cancer-Phylogenetics
Chromosomal-Instability
updated 8 weeks ago by
Ram
45k • written 8 weeks ago by
Bingxin
• 0
2
votes
10
replies
1.6k
views
Proper preprocessing for ML after limma, quantile normalization and log2 transformation: Is standardization still necessary?
featureselection
microarray
preprocessing
updated 8 weeks ago by
Mensur Dlakic
★ 29k • written 8 weeks ago by
Sib
▴ 70
0
votes
0
replies
367
views
How to get gene count and transcript count from Stringtie
Stringtie
updated 8 weeks ago by
GenoMax
152k • written 8 weeks ago by
Abieskawa
• 0
1
vote
1
reply
579
views
Any recommendation for calculating Fu and Li's D using RStudio?
PopGenome
updated 8 weeks ago by
Michael
55k • written 8 weeks ago by
Chatchapon
• 0
1
vote
4
replies
782
views
Running out of disc space with wsl2
Memory
WSL2
capacity
Disc
updated 8 weeks ago by
Mensur Dlakic
★ 29k • written 8 weeks ago by
vladimir_vinarsky
• 0
0
votes
2
replies
562
views
Filtering vcf file for variants - including non-selected variants
bedtools
calling
variant
bcftools
8 weeks ago by
andrebolerbarros
• 0
0
votes
4
replies
790
views
UCSC's NCBI RefSeq Track tables: header differences
ucsc-genome-browswer
refseq
ncbi
8 weeks ago by
Synanth
• 0
3
votes
2
replies
1.6k
views
How do you do differential splicing using edgeR command diffSpliceDGE?
differential-splicing
diffSpliceDGE
edger
updated 8 weeks ago by
Gordon Smyth
★ 8.2k • written 3.4 years ago by
Assa Yeroslaviz
★ 1.9k
0
votes
0
replies
427
views
sequenced noise elimination in searching for snp
snp
sequencing
virus
8 weeks ago by
gagi1993
• 0
0
votes
1
reply
536
views
Issue with Agilent 2100 BioAnalyzer HS DNA Assay Trace
library-preparation
DNA
bioanalyzer
updated 8 weeks ago by
GenoMax
152k • written 8 weeks ago by
Beatrice
• 0
1
vote
2
replies
1.1k
views
QIAseq 16S/ITS Screening Panel Primers?
16s
primers
metagenomics
ITS
updated 8 weeks ago by
GenoMax
152k • written 3.3 years ago by
Isaac
• 0
3
votes
2
replies
757
views
Analysing gene CNV from TCGA using TCGAbiolinks
TCGA
8 weeks ago by
Matt
• 0
1
vote
3
replies
721
views
How to use LOEUF plugin in VEP?
LOEUF
VEP
updated 8 weeks ago by
GenoMax
152k • written 9 weeks ago by
Sd
• 0
0
votes
0
replies
623
views
Trouble with CIBERSORTx: All P-values > 0.05, Low Correlation, High RMSE – What Could Be Going Wrong?
R
CIBERSORTx
CIBERSORT
script
updated 8 weeks ago by
GenoMax
152k • written 8 weeks ago by
Pumla
• 0
0
votes
1
reply
525
views
How can I identify genes with the MSTRG notation?
R
stringtie
RNA-Seq
updated 8 weeks ago by
GenoMax
152k • written 8 weeks ago by
pinheirofabiano
▴ 130
0
votes
0
replies
2.0k
views
dittoHeapmap didn't work in my data set(error code :Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds)
dittoseq
scRNAseq
updated 8 weeks ago by
ATpoint
88k • written 8 weeks ago by
kayah
▴ 20
1
vote
3
replies
692
views
Visualise duplications and inversions
inversions
duplications
updated 8 weeks ago by
cmdcolin
★ 4.2k • written 8 weeks ago by
priya.bmg
▴ 70
1
vote
3
replies
668
views
Exon-level counts via featureCounts
diffSpliceDGE
exon
RNASeq
featureCounts
edgeR
updated 8 weeks ago by
rfran010
★ 1.5k • written 8 weeks ago by
n_navy
▴ 10
0
votes
5
replies
777
views
Picard : Bait_interval and Target_interval
Picard
Bed
read-depth
coverage
updated 8 weeks ago by
Ram
45k • written 8 weeks ago by
AIMAR
▴ 20
3
votes
2
replies
603
views
Does vg giraffe output secondary and supplimentary alignments?
vg
giraffe
8 weeks ago by
lushjia
• 0
0
votes
0
replies
446
views
Question about Calculation of Dietary index in the NHANES Database
index
DI-GM
Dietary
NHANES
9 weeks ago by
城玮
• 0
1
vote
1
reply
574
views
Detection SNPs and Indels Bacteria
SNPs
updated 9 weeks ago by
Istvan Albert
102k • written 9 weeks ago by
Eltercertopico
• 0
1
vote
4
replies
702
views
protease candidates for my protein of interest
cleaving-site
proteases
protein
9 weeks ago by
Fatemeh
▴ 40
1
vote
3
replies
646
views
Different number of fragments after doublets removal in each run
ArchR
8 weeks ago by
Bioinformatics_16
• 0
1
vote
2
replies
570
views
Seeking Guidance on Next Steps for DNA Methylation Biomarker Screening in Cancer Prognosis
early-cancer-screening
TCGA
Epigenomics
DNA-Methylation
cancer-prognosis
8 weeks ago by
Riley J
• 0
0
votes
1
reply
542
views
Help with Panel of Normal (PON)
somatic-mutation
PoN
updated 9 weeks ago by
Ram
45k • written 9 weeks ago by
TJ
• 0
9
votes
5
replies
1.0k
views
6 follow
Why don't I see people calculating FPKM from normalized read counts?
normalization
RNA-seq
updated 8 weeks ago by
kalavattam
▴ 350 • written 9 weeks ago by
shelkmike
★ 1.6k
1
vote
9
replies
1.2k
views
Error during running wf-bacterial-genome (nextflow run epi2me-labs/wf-bacterial-genomes).
EPI2ME
MEDAKA
updated 8 weeks ago by
GenoMax
152k • written 9 weeks ago by
Anurag
• 0
0
votes
0
replies
423
views
freebayes with pools of different number of individuals
freebayes
poolseq
9 weeks ago by
Jeanlain
• 0
0
votes
3
replies
611
views
Insight into Trimmomatic
Trimmomatic
Trimming
Reads
updated 9 weeks ago by
GenoMax
152k • written 9 weeks ago by
jh5ym
• 0
1
vote
3
replies
715
views
Trouble when uploading FASTQ files on NCBI
rnaseq
ncbi
8 weeks ago by
Gerard
▴ 20
121,401 results • Page
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Created a better alternative to clunky gene databases, with functions that are consolidated from various gene databases. It's your one-stop shop for gene info!
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Hi, I ultimately decided not to use Maker, but I think it works as you described. Perhaps this protocol might help: https://gist.github.com…
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