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121,958 results • Page
172 of 2440
Sort: Rank
Rank
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Votes
Replies
1
vote
3
replies
2.3k
views
R ComplexHeatmap - Adujusting the cell size in heatmap
R
complexheatmap
updated 21 months ago by
jv
★ 1.9k • written 21 months ago by
TC_Chang
▴ 10
1
vote
3
replies
1.1k
views
Histogram in ggplot2
R
ggplot2
updated 21 months ago by
Ram
45k • written 21 months ago by
andre.arrudalima
▴ 80
0
votes
2
replies
2.0k
views
How to run Aracne cytoscape plugin ?
R
rna-seq
cytoscape
updated 21 months ago by
Scooter
▴ 310 • written 5.0 years ago by
prithvi.mastermind
▴ 60
0
votes
20
replies
3.8k
views
How can I obtain the DNA sequences of each CDS for several genbank files?
genbank
DNA
sequence
21 months ago by
Raphaëlle
• 0
5
votes
5
replies
1.4k
views
Example MAF Files
MAF
updated 21 months ago by
Ram
45k • written 21 months ago by
anasjamshed
▴ 140
0
votes
1
reply
938
views
downstream analysis on the output of nf-core/rnaseq pipeline
machine-learning
nf-core
rna-seq
updated 21 months ago by
Ram
45k • written 21 months ago by
r.shiasi3897
▴ 10
0
votes
9
replies
1.9k
views
how to use multiple command in one line with using the output of last command to the next
bedtools
linux
bed
21 months ago by
sata72
• 0
0
votes
1
reply
860
views
Database for immunological pathways
pathways
immunology
pathway
database
updated 21 months ago by
jv
★ 1.9k • written 21 months ago by
manaswwm
▴ 570
1
vote
1
reply
783
views
Variant calling using HaplotypeCaller does not show #FILTER information
Variant-calling
GATK
HaplotypeCaller
WGS
updated 21 months ago by
Ram
45k • written 21 months ago by
QX
▴ 80
5
votes
3
replies
1.2k
views
Single cell visulaisation webtool
visualisation
single-cell
updated 21 months ago by
jared.andrews07
★ 19k • written 21 months ago by
HK
▴ 40
0
votes
1
reply
1.0k
views
Error gmx_mmpbsa: LP pseudo-atom is not supported
MMPBSA
gmx_mmpbsa
updated 6 months ago by
GenoMax
154k • written 21 months ago by
bhavya2269
• 0
2
votes
4
replies
1.6k
views
Is it possible to obtain all bacterial assemblies from RefSeq and GenBank that contain a specific gene?
Genbank
ncbi
assemblies
refseq
bacteria
updated 21 months ago by
Joe
22k • written 21 months ago by
Bhargava
• 0
2
votes
3
replies
1.2k
views
Less number of total Species than Genus in 16S data
microbiome
Species
Genus
ASV
16S
updated 21 months ago by
Philipp Bayer
8.9k • written 21 months ago by
arshad1292
▴ 110
6
votes
4
replies
5.1k
views
Confusing results from FindConservedMarkers in Seurat
10XGenomics
Seurat
21 months ago by
pm2012
▴ 140
0
votes
3
replies
1.6k
views
How to run diamond blastp to get all vs all similarity score between proteins?
protein
blastp
clustering
diamond
21 months ago by
Bioinformatics_begginner
▴ 20
8
votes
2
replies
1.5k
views
Forum:
how to start Bioinformatics?
basics
updated 21 months ago by
Mensur Dlakic
★ 30k • written 21 months ago by
sajibsuvo70
• 0
3
votes
2
replies
1.1k
views
How to query NCBI to extract Virus fasta files using BioPython?
Python
BioPython
NCBI
Virus
updated 21 months ago by
josev.die
▴ 70 • written 21 months ago by
Bioinformatics_begginner
▴ 20
1
vote
2
replies
1.1k
views
dashed PDB file/OXT residues
PDB
OXT
updated 21 months ago by
Ram
45k • written 21 months ago by
catiagouveia
• 0
5
votes
6
replies
6.4k
views
How to download all Gene Ontology (GO) IDs with their associated vocabulary?
gene-ontology
GO
updated 21 months ago by
mjsteinbaugh
• 0 • written 2.7 years ago by
Jimmy
▴ 30
1
vote
1
reply
736
views
ANOVA vs T-test for comparing groups in timepoints?
R
statistics
updated 21 months ago by
bhumm
▴ 200 • written 21 months ago by
Carmanian
• 0
0
votes
2
replies
623
views
How to use protologger in Mac Terminal
Protologue
Genome
updated 21 months ago by
Ram
45k • written 21 months ago by
scholaraspect2008
• 0
0
votes
1
reply
862
views
Explanation of definition lines for Trinity .fasta and .SuperTrans.fasta files
Trinity
fasta
updated 21 months ago by
Ram
45k • written 21 months ago by
Melissa
• 0
0
votes
2
replies
1.1k
views
Correlation methods giving very different results (WGCNA)
WGCNA
bicor
pearson
updated 21 months ago by
Ram
45k • written 21 months ago by
ian.will
▴ 30
5
votes
7
replies
3.6k
views
Individual vs. joint call VCFs
GATK
VCF
WGS
updated 21 months ago by
Brian Bushnell
20k • written 21 months ago by
Sd
• 0
4
votes
3
replies
1.6k
views
Running cellranger on multiple files when R1 and R2 fastqs are in multiple subfolders
singlecell
cellranger
bash
updated 21 months ago by
ATpoint
89k • written 21 months ago by
abbas89
▴ 30
1
vote
2
replies
1.2k
views
Extracting GSEA gene rankings from gseaResult object
R
clusterProfiler
GSEA
21 months ago by
mflab
• 0
0
votes
1
reply
787
views
Errors in running ring-pymol plugin
pymol
RING
updated 21 months ago by
GenoMax
154k • written 21 months ago by
Yu Ning
• 0
0
votes
3
replies
836
views
schic barcode file download
barcode
schic
updated 21 months ago by
GenoMax
154k • written 21 months ago by
1125195245
• 0
4
votes
12
replies
10k
views
Extract fasta sequence from gff3 file
sequence
updated 21 months ago by
aleferna
▴ 10 • written 4.6 years ago by
genomes_and_MGEs
▴ 10
5
votes
5
replies
3.0k
views
Get a reference phylogenetic tree of known taxa from GTDB
phylogenetic-tree
bacteria
gtdb
updated 21 months ago by
Andrzej Zielezinski
11k • written 23 months ago by
Gio
▴ 10
0
votes
0
replies
587
views
Combine MAF, GISTIC, and clinical data using maftools
mutation
TCGAbiolinks
maftools
TCGA
21 months ago by
melissachua90
▴ 70
2
votes
3
replies
1.6k
views
Merge overlapping paired end reads from BAM file.
bbmap
bbtools
bbmerge
21 months ago by
chrisk
• 0
2
votes
3
replies
1.6k
views
Converting a .frq file to a data frame?
R
updated 21 months ago by
Ram
45k • written 22 months ago by
arnold
• 0
0
votes
0
replies
498
views
Script Error using TRAVIS.Core.pl script within TRAVIS transcriptome viral scanner
Transcriptome
virus
Perl
travis
updated 21 months ago by
Ram
45k • written 21 months ago by
cwva
• 0
9
votes
6
replies
2.4k
views
Search a read by its name in a big fastq.gz file
NGS
fastq
updated 21 months ago by
Ram
45k • written 22 months ago by
xiaoleiusc
▴ 140
1
vote
3
replies
907
views
Psuedobulk analysis of single cell RNA-Seq data
SCDC
scRNA-Seq
updated 21 months ago by
Nitin Narwade
★ 1.7k • written 21 months ago by
evocanres
▴ 40
1
vote
3
replies
1.5k
views
Empty genes.bam files in RSEM-STAR workflow
star
rsem
updated 21 months ago by
Istvan Albert
103k • written 2.6 years ago by
evocanres
▴ 40
0
votes
0
replies
500
views
News:
Landscape Genomics course at the EPFL in Lausanne, Switzerland
genomics
Landscape-Genomics
updated 21 months ago by
Ram
45k • written 21 months ago by
Physalia-courses
★ 2.6k
0
votes
1
reply
1.4k
views
PacBio subreads.fastq files?
ncbi
PacBbio
updated 21 months ago by
Ram
45k • written 22 months ago by
majeedaasim
▴ 60
0
votes
0
replies
502
views
Having different % aligned reads in RPF and mRNA for TE analysis
RPF
Ribo-Seq
Translation
TE
RNA-seq
21 months ago by
ev97
▴ 40
3
votes
3
replies
3.5k
views
Log-transformation, coefficient of variation, standard error and mass-spectrometry based proteomics
Log-transformation
mass-spectrometry
updated 21 months ago by
Ram
45k • written 5.6 years ago by
jobbe.goossens
▴ 20
0
votes
1
reply
744
views
GFF3 feature too long in IGV
Gff3
IGV
updated 21 months ago by
Istvan Albert
103k • written 21 months ago by
ajaymaran97
• 0
0
votes
1
reply
1.0k
views
MSA using ggtree msaplot
R
ggtree
updated 21 months ago by
MatthewP
★ 1.4k • written 21 months ago by
andre.arrudalima
▴ 80
2
votes
3
replies
1.0k
views
Collapsing Transcript Count Matrix to Gene Count Matrix
rna-seq
gene
dge
transcripts
updated 21 months ago by
Ram
45k • written 21 months ago by
marionette.kent
• 0
1
vote
5
replies
2.1k
views
GATK GenomicsDBImport too slow
GATK
SNP
VCF
21 months ago by
anikcropscience
▴ 270
14
votes
10
replies
3.0k
views
How to remove center population from seurat cluster
single-cell
21 months ago by
synat.keam
▴ 120
0
votes
3
replies
3.1k
views
PLINK can't find my files?
software-error
plink
windows
SNP
updated 21 months ago by
irene.treccani.work
• 0 • written 8.9 years ago by
stephanie.langevin
• 0
0
votes
2
replies
858
views
Help with Extracting and Analyzing Secondary Alignments in BAM file
samjdk
viral-genome
samtools
secondary-alignment
21 months ago by
kelpotus22
• 0
0
votes
0
replies
546
views
% rRNAs discrepancy between sortMeRNA and read count matrices
rRNA
21 months ago by
jkim
▴ 220
2
votes
5
replies
2.3k
views
Help - how to merge human reference genome and GTF file with a custom sequence.
reference-genome
genome
gtf
updated 21 months ago by
Istvan Albert
103k • written 21 months ago by
Dyno
• 0
121,958 results • Page
172 of 2440
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