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121,958 results • Page
171 of 2440
Sort: Rank
Rank
Views
Votes
Replies
2
votes
10
replies
2.5k
views
HGVS Nomenclature of Multiple Indels found in Cis
Nomenclature
HGVS
updated 16 months ago by
Ram
45k • written 21 months ago by
LauferVA
4.8k
0
votes
0
replies
577
views
Significance of Dashes (-) as COG category in EGGNOG-Mapper
undefined
EGGNOG-mapper
category
COG
21 months ago by
kirankumareripogu
▴ 10
3
votes
8
replies
2.2k
views
bwa-mem reproducibility
bam
alignment
bwa-mem
bwa
21 months ago by
scsc185
▴ 80
2
votes
5
replies
1.8k
views
Multiallelic variants when merging VCF's with GLnexus
GLnexus
multiallelic-variants
vcf
updated 21 months ago by
Jeremy Leipzig
23k • written 21 months ago by
Michal Frenkel
▴ 30
0
votes
0
replies
1.0k
views
Does gene raw read count mean and dispersion preserve batch effects if I used raw counts from different batches to calculate them?
sample
size
ssizeRNA
updated 21 months ago by
GenoMax
154k • written 21 months ago by
aldas02027
• 0
0
votes
1
reply
761
views
Merging Sample in vcf file having SNPs info
VCF
updated 21 months ago by
wping
• 0 • written 3.5 years ago by
amar.kant20422
• 0
0
votes
3
replies
949
views
.str to .bed /.bim/.fam file conversion
structure
updated 21 months ago by
Ankit
▴ 520 • written 21 months ago by
avnim
▴ 10
7
votes
3
replies
1.4k
views
Forum:
Binning the rare biosphere
metagenomics
soil
assembly
techniques
binning
updated 21 months ago by
Mensur Dlakic
★ 30k • written 21 months ago by
Konstantin
▴ 40
0
votes
1
reply
717
views
SPADes Tool
Assembler
MRSA
SPADes
updated 21 months ago by
Ram
45k • written 21 months ago by
hafizshaheerahmad006
• 0
2
votes
2
replies
1.2k
views
News:
Unix and Shell Scripting for Bioinformatics course
Bash
Unix
Shell-Scripting
21 months ago by
Physalia-courses
★ 2.6k
0
votes
1
reply
906
views
Obtain satellite DNA monomer from dot plot
repeats
satellites
dot-plot
updated 21 months ago by
shelkmike
★ 1.8k • written 21 months ago by
kirillkirilenko
▴ 40
5
votes
5
replies
1.4k
views
Normalization and Genome-Wide Comparisons with Chipseq
chip-seq
Chipseq
Normalization
updated 21 months ago by
Ankit
▴ 520 • written 21 months ago by
zbeddingfield3
▴ 10
0
votes
6
replies
1.7k
views
Relatedness and GWAS False Signals
regenie
gwas
updated 21 months ago by
LauferVA
4.8k • written 21 months ago by
another_bioinformatician
• 0
0
votes
3
replies
1.2k
views
deeptools computeMatrix gtf file : if name not in self.exons[self.labelIdx]: IndexError: IndexError: list index out of range
metagene
gtf
computeMatrix
deeptools
updated 21 months ago by
Trivas
★ 1.9k • written 21 months ago by
Iam
• 0
6
votes
6
replies
1.7k
views
extract the original sequence from multiple sequence alignment (MSA)
MSA
alignment
21 months ago by
Ann
▴ 40
0
votes
1
reply
735
views
what is the best way to build my design model with DESeq2
design-model
DESeq2
single-cell
updated 21 months ago by
LauferVA
4.8k • written 21 months ago by
paria
▴ 110
0
votes
0
replies
524
views
Error in calculating inter-individual divergence / spread
microbiome
Bioconductor
21 months ago by
benkosta
• 0
0
votes
12
replies
4.7k
views
Differential gene expression analysis with no replicates using edgeR
edgeR
RNA-seq
DEG
updated 21 months ago by
Sajad
▴ 90 • written 2.8 years ago by
Apex92
▴ 320
0
votes
4
replies
1.3k
views
bcl2fastq problems with the yield
bcl2fastq
demultiplexing
illumina
updated 21 months ago by
swbarnes2
15k • written 21 months ago by
Margo
• 0
2
votes
3
replies
1.8k
views
ERROR running Cuffmerge in reference based RNA-SEQ analysis?
cuffmerge
RNA-Seq
Cufflinks
updated 21 months ago by
Amin
• 0 • written 3.4 years ago by
Meeran
▴ 10
0
votes
0
replies
595
views
News:
Bayesian Data Analysis in R course
R
Bayesian-Statistics
updated 21 months ago by
Ram
45k • written 21 months ago by
Physalia-courses
★ 2.6k
2
votes
1
reply
1.1k
views
Condition specific marker detection and problem with the distribution of cells from different samples
scRNAseq
21 months ago by
Sara
▴ 280
0
votes
1
reply
1.0k
views
Enrichment dotplot color
KEGG
R
GO
Enrichment
dotplot
updated 21 months ago by
rpolicastro
13k • written 21 months ago by
Grace
• 0
3
votes
4
replies
2.0k
views
Getting gene counts from transcript counts using R package 'tximport'
tximport
RNA-seq
updated 21 months ago by
Ram
45k • written 21 months ago by
arsala521
▴ 60
4
votes
9
replies
3.0k
views
bcl2fastq troubleshooting all reads dumped to "Undetermined"
demultiplex
illumina
sequencing
updated 21 months ago by
GenoMax
154k • written 21 months ago by
MaxF
▴ 120
0
votes
0
replies
579
views
Error: Require Genotypes in VCF file in order to output IMPUTE format.
vcftools
VCF
updated 21 months ago by
Ram
45k • written 21 months ago by
Warrenkb
• 0
0
votes
2
replies
1.5k
views
how to get sequences by location when pyfaidx.Fasta(read_long_names=True) creates keys from FastaRecord (dmel r6 genome build)?
selene_sdk
pyfaidx
fasta
python
flybase
updated 21 months ago by
Wayne
★ 2.1k • written 21 months ago by
mk
▴ 310
0
votes
0
replies
604
views
News:
Practical Hands-On Introduction to R course
R
Tidyverse
Data-Analysis
updated 21 months ago by
Ram
45k • written 21 months ago by
Physalia-courses
★ 2.6k
6
votes
5
replies
1.7k
views
merging replicates
ChIP-seq
updated 21 months ago by
ATpoint
89k • written 21 months ago by
sk_24
▴ 10
0
votes
0
replies
557
views
cellchat Error in if (dim(prob)[3] <= 25) { : argument is of length zero
R
cellchat
updated 21 months ago by
Ram
45k • written 21 months ago by
yueli7
▴ 250
0
votes
0
replies
843
views
Job:
PhD position at CiMUS (Santiago de Compostela, Spain)
transcriptomics
PhD
RNA-seq
Single-Cell
updated 21 months ago by
Ram
45k • written 21 months ago by
ev97
▴ 40
2
votes
2
replies
2.2k
views
Annotate variants with ensembl rest api
Ensembl
updated 21 months ago by
Ben Moore
★ 2.4k • written 21 months ago by
Andrews
▴ 10
8
votes
7
replies
4.3k
views
How to query 1000 genomes project VCF files for specific regions without downloading whole chromosomes first?
r
ensembl
dataslicer
vcf
1000genomes
updated 21 months ago by
Jeremy Leipzig
23k • written 22 months ago by
kilojarek
▴ 10
1
vote
1
reply
1.4k
views
IGV RNAseq- Splice junction
RNA-Seq
igv
updated 21 months ago by
xiaoleiusc
▴ 140 • written 4.6 years ago by
vinishavvenugopal
▴ 30
0
votes
1
reply
539
views
Finding non transcribe regions for Gonorrhoea
non-transcribe-regions
updated 21 months ago by
Ram
45k • written 21 months ago by
Nham
• 0
0
votes
5
replies
1.4k
views
FeatureCounts Invalid Parameter Error
featureCounts
updated 21 months ago by
Ram
45k • written 21 months ago by
Jamie
• 0
0
votes
0
replies
465
views
Segementation fault when running rifdock
RIFDOCK
21 months ago by
anneday1998
• 0
4
votes
15
replies
3.6k
views
how to test for differential expression in samples where a global increase in gene expression is expected
edgeR
DESeq
Differential-Expression
RNA-Seq
updated 17 months ago by
Gordon Smyth
★ 8.3k • written 21 months ago by
raplayer
▴ 10
1
vote
2
replies
1.4k
views
Pair ended short reads assemble to multiple references with a plasmid also inside
assembly
synthetic
illumina
alignment
21 months ago by
sglass
▴ 30
1
vote
9
replies
7.2k
views
Unable to install bioconda and bowtie
bioconda
conda
updated 21 months ago by
rpolicastro
13k • written 3.0 years ago by
n.anuragsharma
▴ 40
2
votes
2
replies
1.3k
views
How to compute Hudson's/Bhatia's FST in R OR with vcf?
fst
R
vcf
bhatia
hudson
21 months ago by
S
▴ 10
0
votes
3
replies
1.2k
views
extracting instruments for mendelian randomization analysis
genomics
gwas
R
mendelian-randomisation
updated 21 months ago by
Ram
45k • written 21 months ago by
bottle07
• 0
16
votes
3
replies
5.7k
views
Tutorial:
Methylation Analysis Tutorial in R_part2
cancer
methylation
RNA-Seq
R
updated 4.6 years ago by
zhuanggj706
• 0 • written 5.0 years ago by
Hamid Ghaedi
3.3k
1
vote
6
replies
1.5k
views
High levels of duplication in ATAC gDNA control?
atac-seq
deduplication
21 months ago by
a_bis
▴ 40
2
votes
3
replies
2.7k
views
How to put spaces between bars in ggplot2 barplot
r
ggplot2
updated 21 months ago by
rpolicastro
13k • written 21 months ago by
andre.arrudalima
▴ 80
4
votes
3
replies
2.2k
views
Convert bed file from hg19 to GRCH38
hg19
grch38
snp
Vcf
bed
updated 21 months ago by
bk11
★ 3.1k • written 21 months ago by
giulia.cosenza
▴ 20
0
votes
0
replies
499
views
WGCNA on TCGA case-control
TCGA-PRAD
wgcna
TCGA
21 months ago by
Maliha
▴ 30
0
votes
2
replies
781
views
Seeking Individual-Level Genotype Data for Linkage Disequilibrium Analysis Beyond 1000 Genomes Project
Open-Data
Genomics
Genotype-Data
Linkage-Disequilibrium
21 months ago by
Fernando
• 0
3
votes
4
replies
1.0k
views
Discrepancy between the downloaded clinvar, dbNSFP and website
dbnsfp
clinvar
updated 21 months ago by
Ram
45k • written 21 months ago by
MAPK2
▴ 50
0
votes
0
replies
565
views
microarray data analysis in R
microarray
updated 21 months ago by
Ram
45k • written 21 months ago by
bioinformbeginner
• 0
121,958 results • Page
171 of 2440
Recent Votes
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• 0
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Try to switch to percentage view of this graph. Stacked bar charts with different heights can sometimes be misleading.
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Biochemical changes
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Sorry about that. It's when I align the paired reads together like the left and righ, they should align with common sequence at some ends, …
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Just adding some detail here that may help draw some connections with other posts, I did a bunch of sleuthing with selectively trimming dif…
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It's a little unclear what you mean by "I was able to use wgsim, but when I tried aligning the paired-reads, it's not aligning together."
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