6 days ago by
ashaneev07
▴
20
2
votes
5
replies
487
views
0
votes
1
reply
172
views
0
votes
1
reply
753
views
3
votes
2
replies
299
views
0
votes
0
replies
123
views
updated 5 days ago by
dariober
14k
•
written 7 days ago by
rene.j.erhardt
▴
20
1
vote
3
replies
306
views
1
vote
3
replies
396
views
updated 6 days ago by
Mensur Dlakic
★
27k
•
written 8 days ago by
O.rka
▴
710
4
votes
2
replies
305
views
0
votes
3
replies
403
views
4 days ago by
Assa Yeroslaviz
★
1.8k
1
vote
7
replies
521
views
updated 5 days ago by
bk11
★
2.4k
•
written 9 days ago by
starswillfade
▴
10
2
votes
5
replies
387
views
1
vote
3
replies
395
views
5
votes
5
replies
565
views
updated 1 day ago by
Mbofire
•
0
•
written 10 days ago by
Ming Tommy Tang
★
3.9k
1
vote
1
reply
171
views
4 days ago by
heelpPlease
•
0
5
votes
4
replies
371
views
2
votes
4
replies
290
views
updated 4 days ago by
Ram
43k
•
written 12 days ago by
michelafrancesconi9
▴
20
1
vote
8
replies
474
views
4 days ago by
marco.barr
▴
90
0
votes
10
replies
520
views
2
votes
11
replies
913
views
updated 6 days ago by
jkbonfield
★
1.2k
•
written 17 days ago by
me
•
0
1
vote
6
replies
332
views
1
vote
0
replies
186
views
2 days ago by
carlopecoraro2
★
2.5k
1
vote
2
replies
277
views
0
votes
3
replies
337
views
4
votes
15
replies
1.6k
views
updated 1 day ago by
Gordon Smyth
★
7.1k
•
written 4 months ago by
raplayer
▴
10
1
vote
4
replies
1.1k
views
29
votes
28
replies
34k
views
11 follow
updated 2 days ago by
thomas.heigl.ibk
•
0
•
written 12.8 years ago by
Bioscientist
★
1.7k
2
votes
4
replies
2.6k
views
2
votes
5
replies
929
views
4
votes
9
replies
2.1k
views
6 follow
0
votes
1
reply
542
views
updated 2 days ago by
clairechung112
•
0
•
written 2.2 years ago by
Bogdan
★
1.4k
4
votes
9
replies
2.1k
views
5 days ago by
anna
▴
20
16
votes
12
replies
7.3k
views
10 follow
2
votes
2
replies
1.8k
views
updated 1 day ago by
e.r.zakiev
▴
210
•
written 3.8 years ago by
n.anuragsharma
▴
40
1
vote
14
replies
2.3k
views
updated 2 days ago by
GenoMax
142k
•
written 4.5 years ago by
Swimming bird
▴
20
1
vote
6
replies
2.8k
views
updated 5 days ago by
dimpleadiwal050896
•
0
•
written 4.9 years ago by
ggman
▴
90
40
votes
10
replies
42k
views
8 follow
updated 5 days ago by
cwwong13
▴
40
•
written 6.7 years ago by
lessismore
★
1.3k
2
votes
2
replies
2.6k
views
Recent Locations •
All
Iran, 6 minutes ago
Europe, 13 minutes ago
Israel, 15 minutes ago
South Korea, 19 minutes ago
India, 24 minutes ago
Germany, 27 minutes ago
China, 28 minutes ago
Recent Awards •
All
Popular Question to
Yoosef
▴
60
Popular Question to
Zhenyu Zhang
★
1.2k
Popular Question to
psm
▴
130
Popular Question to
Medhat
9.7k
Autobiographer to
Mathew
▴
30
Commentator to
dsull
★
6.0k
Scholar to
BioinfGuru
★
1.7k
Recent Replies
Comment: The GDC Legacy Archive is retiring soon.
by
Zhenyu Zhang
★
1.2k
If you are talking about methylation idat files, they were all migrated from legacy to the data portal.
If you are talking about other pl…
Comment: How to access TCGA samples that were treated with a specific drug?
by
Zhenyu Zhang
★
1.2k
These TCGA samples were taken 10 ~ 20 years ago, and there is no way they have been treated by the modern immunotherapy.
Are you sure tha…
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1))
It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴
10
Hi Mathew,
The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴
30
Hi,
I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴
30
Hi,
You asked three questions so I will attempt to help the best I can
**What should be the optimal GC score cutoff**
It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Traffic: 1439 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6