0
votes
0
replies
10
views
0
votes
0
replies
19
views
0
votes
0
replies
12
views
2
votes
5
replies
94
views
updated 34 minutes ago by
Philipp Bayer
8.5k
•
written 4 hours ago by
林明德
•
0
0
votes
4
replies
2.2k
views
0
votes
0
replies
26
views
3 hours ago by
ntsopoul
▴
60
0
votes
0
replies
32
views
0
votes
0
replies
33
views
0
votes
1
reply
58
views
4 hours ago by
Arton
•
0
0
votes
0
replies
31
views
0
votes
4
replies
81
views
795
votes
167
replies
143k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
1
reply
84
views
0
votes
1
reply
85
views
updated 5 hours ago by
GenoMax
142k
•
written 7 hours ago by
cedric.blais
•
0
0
votes
2
replies
367
views
0
votes
1
reply
82
views
1
vote
4
replies
346
views
1
vote
3
replies
308
views
0
votes
1
reply
140
views
1
vote
2
replies
109
views
0
votes
0
replies
56
views
1
vote
2
replies
142
views
1
vote
0
replies
57
views
12 hours ago by
J.
▴
10
0
votes
0
replies
69
views
0
votes
1
reply
84
views
updated 6 hours ago by
Ram
43k
•
written 12 hours ago by
kilcdincer
▴
10
0
votes
3
replies
129
views
0
votes
0
replies
60
views
0
votes
1
reply
106
views
0
votes
1
reply
90
views
0
votes
1
reply
108
views
0
votes
3
replies
132
views
3
votes
2
replies
221
views
11 hours ago by
analyst
▴
50
0
votes
0
replies
58
views
0
votes
1
reply
374
views
updated 17 hours ago by
aw7
▴
280
•
written 24 days ago by
abhishekghadge
•
0
1
vote
1
reply
170
views
0
votes
0
replies
70
views
1
vote
0
replies
68
views
2
votes
3
replies
210
views
3
votes
2
replies
139
views
updated 19 hours ago by
ATpoint
82k
•
written 19 hours ago by
jennyp0706
•
0
0
votes
1
reply
130
views
updated 20 hours ago by
Philipp Bayer
8.5k
•
written 1 day ago by
samRayne
•
0
0
votes
1
reply
214
views
2
votes
13
replies
2.8k
views
6 follow
updated 22 hours ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
0
votes
1
reply
167
views
0
votes
1
reply
211
views
updated 1 day ago by
Zhenyu Zhang
★
1.2k
•
written 3 days ago by
jain72744
▴
10
2
votes
5
replies
519
views
1
vote
2
replies
302
views
updated 12 hours ago by
Ram
43k
•
written 1 day ago by
t.fortunato.asquini
•
0
2
votes
1
reply
233
views
updated 1 day ago by
pjb39
▴
210
•
written 3 days ago by
beantkapoor16
▴
10
0
votes
2
replies
185
views
updated 19 hours ago by
colindaven
6.4k
•
written 1 day ago by
ramendra.sarma
•
0
0
votes
0
replies
99
views
Recent Votes
Recent Locations •
All
Australia, 1 minute ago
Singapore, 2 minutes ago
United States, 2 minutes ago
United States, 2 minutes ago
France, 8 minutes ago
Singapore, 8 minutes ago
Australia, 14 minutes ago
Recent Awards •
All
Autobiographer to
Jeol
▴
20
Popular Question to
Pegasus
▴
100
Popular Question to
RNAseqer
▴
270
Scholar to
kalavattam
▴
190
Commentator to
Santosh Anand
5.7k
Popular Question to
lagartija
▴
160
Recent Replies
Comment: What does the 'E%' represent in BUSCO results?
by
Philipp Bayer
8.5k
No worries! I found the commit with the maths too: https://gitlab.com/ezlab/busco/-/blame/master/src/busco/busco_tools/hmmer.py?page=2#L135…
Comment: What does the 'E%' represent in BUSCO results?
by
林明德
•
0
Thank you for your answer! It really helped me resolve a doubt!
Answer: What does the 'E%' represent in BUSCO results?
by
Philipp Bayer
8.5k
Ah your edit solved this. 50 BUSCOs contain internal stop codons, indicating they might be erroneous gene models, or the genes themselves a…
Answer: MGLTools does not work in windows 11
by
Ashfaq
•
0
In my case, I did not see iGPU. There is only one option, Intel UHD Graphics.
What I need to do?
Comment: What does the 'E%' represent in BUSCO results?
by
Philipp Bayer
8.5k
funny enough i tried the same thing (i've used BUSCO heaps times but never saw the E:! even the manual lists 'C:89.0%[S:85.8%,D:3.2%],F:6.9…
Comment: What does the 'E%' represent in BUSCO results?
by
GenoMax
142k
According to ChatGPT:
In BUSCO, the "E" category represents "End" or "Endof" gene fragments. These are orthologous groups for which the ge…
Answer: Filtering based on alternate allelic balance
by
Arton
•
0
I found the answer when using bcftools. Is there is a way to do this with FilterVcf?
bcftools filter --include '(FMT/AD[0:1])/(FMT/A…
Comment: Help with IGV abbreviation
by
GenoMax
142k
Those are SAM format fields. Check section 1.4 here: https://samtools.github.io/hts-specs/SAMv1.pdf
> 1:2114:12111:13792
That is part of …
Answer: Help with IGV abbreviation
by
Mathew
▴
130
Hi, here is a breakdown of each part that you asked about:
**flag 99**: This indicates various properties of the read alignment. In this c…
Comment: Kraken2 database
by
Mathew
▴
130
I don't see any databases with just pathogenic bacteria genomes from just a quick search, I would imagine that using the Standard-16 databa…
Comment: Galaxy StringTie error
by
Mathew
▴
130
I am not sure if this is true for Galaxy, but when I code in Python, SyntaxWarning: invalid escape sequence '' occurs when you want to add …
Comment: Can diamond prepdb be used to make a taxonomically aware database?
by
GenoMax
142k
Should be possible: https://www.biostars.org/p/430366/
Are you using an older version of `diamond`? Latest versions of `diamond` can use N…
Traffic: 1682 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6