0
votes
1
reply
763
views
8
votes
10
replies
746
views
0
votes
0
replies
737
views
0
votes
0
replies
736
views
2
votes
5
replies
710
views
2
votes
5
replies
683
views
1
vote
0
replies
678
views
updated 15 days ago by
Ram
43k
•
written 5.2 years ago by
Sebastian Hesse
▴
340
0
votes
1
reply
662
views
updated 29 days ago by
Ram
43k
•
written 13 months ago by
wlei091226
•
0
1
vote
1
reply
662
views
updated 15 days ago by
Ram
43k
•
written 4.4 years ago by
s.lima.diogenes
▴
10
0
votes
1
reply
659
views
2
votes
6
replies
652
views
0
votes
0
replies
652
views
2
votes
2
replies
634
views
0
votes
3
replies
631
views
0
votes
2
replies
628
views
0
votes
6
replies
619
views
0
votes
4
replies
618
views
0
votes
9
replies
612
views
1
vote
1
reply
600
views
updated 20 days ago by
Ram
43k
•
written 3.3 years ago by
ramin.k2013
•
0
0
votes
0
replies
597
views
4
votes
9
replies
590
views
updated 28 days ago by
Ram
43k
•
written 29 days ago by
dalibenam64
•
0
4
votes
7
replies
581
views
0
votes
2
replies
581
views
0
votes
6
replies
577
views
0
votes
2
replies
566
views
0
votes
5
replies
565
views
0
votes
0
replies
565
views
0
votes
11
replies
560
views
0
votes
2
replies
558
views
0
votes
1
reply
554
views
1
vote
0
replies
545
views
1
vote
1
reply
543
views
0
votes
4
replies
543
views
14 days ago by
feather-W
•
0
0
votes
1
reply
533
views
0
votes
2
replies
520
views
0
votes
1
reply
519
views
2
votes
5
replies
515
views
0
votes
5
replies
507
views
25 days ago by
marongiu.luigi
▴
710
3
votes
3
replies
496
views
0
votes
1
reply
490
views
updated 6 days ago by
ginellegrenier
•
0
•
written 4 months ago by
Clayton
•
0
1
vote
1
reply
486
views
updated 29 days ago by
Ram
43k
•
written 9 months ago by
josh.mannheimer
•
0
0
votes
6
replies
482
views
22 days ago by
marongiu.luigi
▴
710
0
votes
0
replies
480
views
updated 20 days ago by
Ram
43k
•
written 2.1 years ago by
ramin.k2013
•
0
0
votes
10
replies
478
views
2
votes
5
replies
478
views
1
vote
1
reply
475
views
updated 23 days ago by
chrchang523
10k
•
written 23 days ago by
dsbusiness135
▴
10
1
vote
1
reply
467
views
0
votes
1
reply
462
views
updated 29 days ago by
Ram
43k
•
written 10 months ago by
rene.j.erhardt
▴
20
0
votes
6
replies
456
views
0
votes
0
replies
450
views
Recent Locations •
All
Marseille, just now
Norway, just now
United States, 1 minute ago
India, 1 minute ago
UK, 2 minutes ago
Bologna, 3 minutes ago
France - Institut du Thorax, 5 minutes ago
Recent Awards •
All
Popular Question to
massa.kassa.sc3na
▴
600
Teacher to
shenwei356
8.5k
Popular Question to
Apex92
▴
280
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
Jeol
▴
20
Popular Question to
lefthandgergo
▴
10
Popular Question to
mgranada3
▴
30
Recent Replies
Comment: RNAseq one control two conditions, shared and exclusive genes
by
Mohamed Abderrahmane
▴
20
In your table RawCounts, keep only the columns corresponding to condition 1 and the control. Edit the table sampleTable to align with your …
Comment: Problem with data downloaded from Short Reads Archive (SRA)
by
Begonia_pavonina
▴
150
Thank you @atpoint, I did already investigate with cutadapt (part of the pipeline) and with the author of DADA2. And it seems that the "Bio…
Comment: Discrepancy in read counts from fastq
by
GenoMax
142k
Try `reformat.sh` from BBMap suite and its sampling parameters. You may get a third answer. Programs do some approximations so it is probab…
Comment: Problem with data downloaded from Short Reads Archive (SRA)
by
ATpoint
82k
One cannot help you with this. The error is from R, yet you show not a single line of R code.
Comment: Bacterial plasmid analysis
by
Daria
▴
10
I am the colleague! My tool groups together plasmids based on two genetic distances: containment (how much of the smaller plasmid's sequenc…
Comment: Subsetting and merging back Seurat Object brings different results
by
Bine
▴
60
Noone has an idea? Thank you!
Answer: Bacterial plasmid analysis
by
shenwei356
8.5k
My colleague has an unpublished tool for plasmid analysis (clustering), and it has really good results. You might have a try.
https://githu…
Comment: Odd alignment question/finding
by
ATpoint
82k
bwa mem is not fully deterministic, see from the developer: https://www.biostars.org/p/238628/#238817
Comment: How to perform single cell multimodal integration using Seurat for Geo datasets
by
ATpoint
82k
It's funny that you ask because the paper that these data were used for is called `Integrated analysis of multimodal single-cell data` from…
Comment: Odd alignment question/finding
by
liorglic
★
1.4k
I can't come up with an explanation, but two things you can try for debugging are: 1) look at the fastp stats - do they add up and make sen…
Answer: Bacterial plasmid analysis
by
Mensur Dlakic
★
27k
If you put all your sequences in separate files but in the same directory, this program will build a cladogram based on average nucleotide …
Comment: POSSUM not working due to incompatible pssm file
by
rianna.collins
•
0
Thank you so much. I'm new to this and didn't realise there was a code option.
Answer: Is there a way to increase the automatic label text size in Cytoscape?
by
Scooter
▴
280
Greetings,
Are you saying that you can't use the size setting in the style tab? That should certainly work, as should the label size se…
Comment: Basic stats in hierfstat
by
mdav
•
0
Hi Zoe, did you find an answer for this? I am also getting the same error.
Comment: GATK won't produce figures while analyzing covariates to generate 'recal_plots.p
by
GenoMax
142k
Your cluster may be missing libraries etc to create the PDF plots (this looks like a cluster job submission) on your cluster. Did you check…
Traffic: 2401 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6