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Showing :
questions
5
votes
2
replies
3.9k
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Identification of functionally relevant regions from ChIP-seq experiments
RNA-seq
TFBS
ChIP-seq
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
Dataminer
★ 2.8k
0
votes
0
replies
2.3k
views
Mutation detection/calling from RNA-seq data
RNA-Seq
Mutation-call
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
Dataminer
★ 2.8k
5
votes
8
replies
2.8k
views
Snps In Protein Domains
snp
genomics
updated 10.1 years ago by
Pablo
★ 1.9k • written 10.1 years ago by
Dataminer
★ 2.8k
11
votes
3
replies
14k
views
Mpileup With A Region File
samtools
variant
chip-seq
mpileup
updated 10.2 years ago by
Devon Ryan
104k • written 10.2 years ago by
Dataminer
★ 2.8k
3
votes
6
replies
5.6k
views
Interpreting Results From Mpileup
samtools
variant-calling
updated 10.3 years ago by
Jordan
★ 1.3k • written 10.3 years ago by
Dataminer
★ 2.8k
21
votes
12
replies
9.6k
views
8 follow
Chip Seq Data Analysis
chip-seq
galaxy
updated 10.3 years ago by
bede.portz
▴ 540 • written 13.1 years ago by
Dataminer
★ 2.8k
2
votes
4
replies
4.5k
views
Genomic Distribution Of Peaks
chip-seq
data
analysis
updated 10.4 years ago by
Biostar
20 • written 12.9 years ago by
Dataminer
★ 2.8k
16
votes
3
replies
3.7k
views
Computing Number Of Nucleotide And Genes On Each Chromosome
chip-seq
ucsc
mysql
updated 10.5 years ago by
Biostar
20 • written 11.1 years ago by
Dataminer
★ 2.8k
40
votes
21
replies
11k
views
12 follow
Nobel Prize And Bioinformatics
updated 10.6 years ago by
Neilfws
49k • written 13.1 years ago by
Dataminer
★ 2.8k
1
vote
0
replies
1.8k
views
Crm Cis Regulatory Modules
functional
genomics
updated 10.6 years ago by
Biostar
20 • written 12.9 years ago by
Dataminer
★ 2.8k
13
votes
9
replies
8.8k
views
Mirna-Gene Network Construction
mirna
mrna
network
updated 10.7 years ago by
Sasha Fokin
▴ 80 • written 12.7 years ago by
Dataminer
★ 2.8k
10
votes
9
replies
6.0k
views
Construction Of Average Gene Profile
chip-seq
python
perl
r
updated 10.8 years ago by
Biostar
20 • written 11.2 years ago by
Dataminer
★ 2.8k
5
votes
3
replies
4.6k
views
Conversion ......... Bed File In Hg18 To Hg19
conversion
genomics
chip-seq
updated 10.8 years ago by
KCC
★ 4.1k • written 10.8 years ago by
Dataminer
★ 2.8k
22
votes
10
replies
4.8k
views
9 follow
Pathway Enrichment & Genes Shared Between The Pathways
enrichment
r
updated 10.9 years ago by
lkmklsmn
▴ 970 • written 11.0 years ago by
Dataminer
★ 2.8k
4
votes
7
replies
2.6k
views
Normalising Tag Count To Rpkm
rna-seq
chip-seq
updated 10.9 years ago by
Michael
54k • written 10.9 years ago by
Dataminer
★ 2.8k
4
votes
5
replies
9.3k
views
How To Generate A Heatmap Of Go Terms/Pathways
enrichment
heatmap
r
python
kegg
go
updated 11.0 years ago by
enunvillafer
▴ 100 • written 11.0 years ago by
Dataminer
★ 2.8k
3
votes
2
replies
4.3k
views
Looking For A Package In R For Gene Set Enrichment
updated 11.0 years ago by
Irsan
★ 7.8k • written 11.0 years ago by
Dataminer
★ 2.8k
5
votes
2
replies
3.3k
views
Identification Of Genes (Computationally) Driving Pathways
rna-seq
pathway
updated 11.0 years ago by
brentp
24k • written 11.0 years ago by
Dataminer
★ 2.8k
5
votes
1
reply
3.7k
views
Ideas For Best Representation Of Differentially Expressed Genes
heatmap
chip-seq
rna-seq
updated 11.0 years ago by
David
▴ 740 • written 11.0 years ago by
Dataminer
★ 2.8k
4
votes
4
replies
2.4k
views
Building & Comparing Gene Networks Based On Expression Values
cytoscape
updated 11.0 years ago by
Heather Vincent
▴ 180 • written 11.0 years ago by
Dataminer
★ 2.8k
1
vote
6
replies
4.8k
views
Computing P-Value Or Qvalue Or Both From Peak File
statistics
chip-seq
updated 11.2 years ago by
KCC
★ 4.1k • written 11.2 years ago by
Dataminer
★ 2.8k
6
votes
4
replies
6.6k
views
Conversion Form Broad Peak Format Of Macs2 To Narrow Peak Format
chip-seq
updated 11.2 years ago by
Sukhi Singh
11k • written 11.2 years ago by
Dataminer
★ 2.8k
3
votes
3
replies
3.9k
views
Is There A Way To Rank The Peaks In The Broad Peak File Produced By Macs2
chip-seq
peak-calling
updated 11.2 years ago by
KCC
★ 4.1k • written 11.2 years ago by
Dataminer
★ 2.8k
1
vote
2
replies
5.0k
views
Cutoff For Broad Peaks For Macs2 Peakcaller
peak-calling
macs
chip-seq
11.3 years ago by
Dataminer
★ 2.8k
21
votes
9
replies
4.5k
views
7 follow
How One Can Computationally Analyse The Functional Impact Of Frameshift Mutations?
snp
mutation
homework
updated 11.3 years ago by
Istvan Albert
100k • written 13.1 years ago by
Dataminer
★ 2.8k
3
votes
8
replies
3.1k
views
Chip Seq Peak Annotation ... .. Missing Genes In Annotation
chip-seq
genomics
updated 11.5 years ago by
Sukhi Singh
11k • written 11.5 years ago by
Dataminer
★ 2.8k
3
votes
7
replies
9.2k
views
Irreproducible Discovery Rate
r
chip-seq
genomics
updated 14 months ago by
Ram
43k • written 11.5 years ago by
Dataminer
★ 2.8k
8
votes
5
replies
1.8k
views
Marking Differentially Expressed Genes
differential
gene
affymetrix
updated 11.8 years ago by
Sean Davis
26k • written 12.4 years ago by
Dataminer
★ 2.8k
4
votes
2
replies
6.1k
views
Micro Rna Expression Database
mirna
database
disease
updated 11.8 years ago by
Larry_Parnell
16k • written 12.4 years ago by
Dataminer
★ 2.8k
5
votes
3
replies
2.9k
views
Converting Coordinates Of Peak File From Hg18 To Hg19
chip-seq
genomics
updated 14 months ago by
Ram
43k • written 11.9 years ago by
Dataminer
★ 2.8k
14
votes
9
replies
7.2k
views
Constructing An Heatmap Of "Distance Of Binding Region Relative To Tss"
chip-seq
next-gen
updated 11.9 years ago by
Leonor Palmeira
3.9k • written 11.9 years ago by
Dataminer
★ 2.8k
5
votes
8
replies
2.2k
views
Visualisation Of Interaction
cytoscape
updated 11.9 years ago by
Russh
★ 1.2k • written 11.9 years ago by
Dataminer
★ 2.8k
4
votes
1
reply
2.1k
views
Overlapping Peaks (Genomic Regions From Chip Seq Expt)
chip-seq
genomics
updated 14 months ago by
Ram
43k • written 11.9 years ago by
Dataminer
★ 2.8k
24
votes
3
replies
12k
views
To Get All Genes Within A Genomic Region
chip-seq
genomics
updated 12.0 years ago by
Paolo
▴ 320 • written 12.0 years ago by
Dataminer
★ 2.8k
4
votes
4
replies
4.4k
views
Pathway Enrichment With Expression Values
pathway-enrichment
updated 10 months ago by
Ram
43k • written 12.0 years ago by
Dataminer
★ 2.8k
2
votes
4
replies
7.1k
views
Rna-Seq Data For Cd34+ Cells Or An Alternative Approach To Compare My Expression Set
rna-seq
updated 12.1 years ago by
Sebastian Boegel
▴ 520 • written 12.1 years ago by
Dataminer
★ 2.8k
3
votes
6
replies
2.8k
views
Visualising Peaks Of Chip Seq Experiments On Different Chromosomes
chip-seq
visualization
updated 12.1 years ago by
Sukhi Singh
11k • written 12.1 years ago by
Dataminer
★ 2.8k
55
votes
13
replies
8.5k
views
7 follow
Rna-Seq Data Analysis & Good Review/Research Article On Same
RNA-seq
updated 14 months ago by
Ram
43k • written 13.1 years ago by
Dataminer
★ 2.8k
6
votes
5
replies
5.8k
views
Detecting Mutation In A Gene From Rna Seq Data
rna
seq
data
analysis
12.1 years ago by
Dataminer
★ 2.8k
8
votes
2
replies
4.8k
views
Motif Annotation
motif
annotation
gene
updated 12.1 years ago by
Charles E. Grant
▴ 240 • written 12.2 years ago by
Dataminer
★ 2.8k
4
votes
4
replies
2.9k
views
Identifying Interaction Between Tfs As Regulators Or/And Targets
chip-seq
transcription
network
binding
updated 12.2 years ago by
Marcin Cieslik
▴ 520 • written 12.2 years ago by
Dataminer
★ 2.8k
7
votes
4
replies
2.7k
views
Identification Of Genomic Regions Where Multiple Tf Binds.
chip-seq
overlap
updated 12.3 years ago by
Hanif Khalak
★ 1.3k • written 12.3 years ago by
Dataminer
★ 2.8k
12
votes
3
replies
3.4k
views
Database For Genes Implicated In Lymphoid And Myeloid Development
database
cancer
genomics
updated 12.7 years ago by
julieN
▴ 250 • written 12.7 years ago by
Dataminer
★ 2.8k
8
votes
8
replies
3.5k
views
Enzymes Responsible For Deposition Of H3K4Me3
database
updated 12.7 years ago by
Casey Bergman
18k • written 12.7 years ago by
Dataminer
★ 2.8k
18
votes
18
replies
4.7k
views
8 follow
Tf And Gene(S) Regulated By Them
transcription
gene
updated 2.3 years ago by
Ram
43k • written 12.8 years ago by
Dataminer
★ 2.8k
7
votes
6
replies
3.5k
views
Construction Of Transcriptional Regulatory Network
gene
network
updated 12.8 years ago by
Casey Bergman
18k • written 12.9 years ago by
Dataminer
★ 2.8k
6
votes
10
replies
7.5k
views
7 follow
Homer ...Software For Motif Discovery And Next Generation Sequencing Analysis
chip-seq
rna
data
updated 12.8 years ago by
Sukhi Singh
11k • written 12.9 years ago by
Dataminer
★ 2.8k
24
votes
13
replies
23k
views
7 follow
Mapping Genes To Pathway
pathway
updated 12.9 years ago by
Robin Haw
▴ 170 • written 12.9 years ago by
Dataminer
★ 2.8k
17
votes
7
replies
8.0k
views
Biological Processes (Go Id) Associated/Linked With Cancer
gene
gene
updated 12.9 years ago by
Khader Shameer
18k • written 12.9 years ago by
Dataminer
★ 2.8k
14
votes
7
replies
4.9k
views
Difference In Genome Builds
genome
updated 13.1 years ago by
Jorge Amigo
14k • written 13.1 years ago by
Dataminer
★ 2.8k
103 results • Page
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