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questions
1
vote
1
reply
2.1k
views
HLA typing analysis
HLA
7.2 years ago by
agata88
▴ 870
0
votes
0
replies
1.2k
views
Different results of bwa mapping for one file and multiple files
bwa
7.2 years ago by
agata88
▴ 870
2
votes
5
replies
4.1k
views
What allele frequency threshold do you recommend?
varscan
updated 7.3 years ago by
Biostar
20 • written 7.4 years ago by
agata88
▴ 870
3
votes
13
replies
5.4k
views
PubMed connection error
pubmed
7.3 years ago by
agata88
▴ 870
0
votes
5
replies
2.3k
views
Blast search for solanum pseudomolecules
blast
7.3 years ago by
agata88
▴ 870
0
votes
1
reply
2.2k
views
Different output from pileup and mpileup commands VarScan
Varscan
mpileup
7.3 years ago by
agata88
▴ 870
1
vote
0
replies
2.9k
views
What is genotype quality scale?
varscan
genotype
quality
7.4 years ago by
agata88
▴ 870
0
votes
2
replies
1.7k
views
Qiime - otu_category_significance- how to interprate the output?
statistics
qiime
7.4 years ago by
agata88
▴ 870
2
votes
8
replies
2.3k
views
usearch version, which one use to get results faster?
usearch
metagenomic
7.4 years ago by
agata88
▴ 870
0
votes
4
replies
1.6k
views
How to get metagenomic healthy reference?
metagenomic
16S
HMP
7.4 years ago by
agata88
▴ 870
0
votes
1
reply
1.3k
views
How can I concatenate clinical data to metagenomic results?
metagenomic
updated 7.5 years ago by
olorze
• 0 • written 7.9 years ago by
agata88
▴ 870
1
vote
2
replies
1.6k
views
What HLA tool for commercial usage?
HLA
updated 7.5 years ago by
Ron
★ 1.2k • written 7.5 years ago by
agata88
▴ 870
1
vote
9
replies
2.2k
views
How to get consensus sequences from vcf file for hetero SNP?
consensus
vcf
updated 7.5 years ago by
Biostar
20 • written 7.6 years ago by
agata88
▴ 870
0
votes
8
replies
2.8k
views
How to interprate variant annotation?
SNP
annotation
annovar
7.6 years ago by
agata88
▴ 870
2
votes
14
replies
2.3k
views
How to map by bwa with 50 mismatches?
bwa
7.6 years ago by
agata88
▴ 870
9
votes
16
replies
1.9k
views
How to calculate probability?
stat
updated 7.6 years ago by
Michael
54k • written 7.6 years ago by
agata88
▴ 870
0
votes
1
reply
1.1k
views
Is it possible to increase number of read size in probe sequencing?
dna
probe
sequencing
updated 7.7 years ago by
WouterDeCoster
47k • written 7.7 years ago by
agata88
▴ 870
0
votes
0
replies
1.1k
views
Illumina metagenomic report include a lot of species, why?
metagenomics
species
illumina
7.7 years ago by
agata88
▴ 870
3
votes
2
replies
2.6k
views
Does annovar print canonical transcripts?
annovar
transcripts
updated 7.7 years ago by
steve
★ 3.5k • written 8.0 years ago by
agata88
▴ 870
2
votes
7
replies
2.8k
views
How to find motif in other genes?
motif
dna
7.7 years ago by
agata88
▴ 870
0
votes
1
reply
1.5k
views
How to check if my starters occur bacteria species?
silva
bacteria
updated 7.7 years ago by
pld
5.1k • written 7.7 years ago by
agata88
▴ 870
4
votes
2
replies
1.3k
views
How to connect to PubMed database?
ncbi
pubmed
updated 7.7 years ago by
Medhat
9.7k • written 7.7 years ago by
agata88
▴ 870
2
votes
3
replies
2.9k
views
tophat output summary
RNA-Seq
tophat
7.7 years ago by
agata88
▴ 870
4
votes
15
replies
2.2k
views
Solanum tuberosum gff file
RNA-Seq
ensembl
HTSeq
7.7 years ago by
agata88
▴ 870
5
votes
11
replies
1.9k
views
Solanum tuberosum reference, where can I download it?
plant
RNA-Seq
7.8 years ago by
agata88
▴ 870
0
votes
0
replies
1.7k
views
PCOA plot for special genus
metagenomics
16S
7.8 years ago by
agata88
▴ 870
2
votes
3
replies
1.5k
views
Where can I find sequences for V3 V4 reagions of borrelia?
metagenomes
sequence
updated 7.9 years ago by
natasha.sernova
★ 4.0k • written 7.9 years ago by
agata88
▴ 870
4
votes
5
replies
3.9k
views
Designing primers for family of genes
primers
updated 7.9 years ago by
Erik Wright
▴ 420 • written 7.9 years ago by
agata88
▴ 870
0
votes
6
replies
1.8k
views
Whole genome plant sequencing
plant
genome
ngs
7.9 years ago by
agata88
▴ 870
0
votes
8
replies
2.8k
views
Trimming of 16S reads
sra
trimming
trimmomatic
16S
metagenome
8.0 years ago by
agata88
▴ 870
1
vote
0
replies
3.0k
views
alpha-diversity beta-diversity rarefaction curves
metagenome
qiime
8.0 years ago by
agata88
▴ 870
2
votes
5
replies
1.7k
views
how to detect repetitive motifs in gene?
gene
repetitive
updated 8.0 years ago by
Antonio R. Franco
★ 5.1k • written 8.0 years ago by
agata88
▴ 870
2
votes
3
replies
1.9k
views
Comparion of results to publicly available databases
metagenomics
16S
updated 8.0 years ago by
Charles Warden
8.2k • written 8.0 years ago by
agata88
▴ 870
4
votes
2
replies
2.2k
views
How to change identity for blast assign taxonomy?
qiime
updated 8.0 years ago by
shani.noam
• 0 • written 8.1 years ago by
agata88
▴ 870
1
vote
4
replies
1.2k
views
How can I find reference composition of bacteria in helathy gut?
metagenomics
8.0 years ago by
agata88
▴ 870
0
votes
4
replies
2.2k
views
How can I label snp that are false positive?
ngs
vcf
multiplex
8.0 years ago by
agata88
▴ 870
2
votes
4
replies
2.7k
views
How to add protein ID transcript ("NP_")?
next-gen
annotation
updated 8.1 years ago by
Pierre Lindenbaum
161k • written 8.1 years ago by
agata88
▴ 870
0
votes
0
replies
3.0k
views
SNPEff, SNPSift errors
SNP
sequencing
variant annotation
8.1 years ago by
agata88
▴ 870
5
votes
8
replies
2.0k
views
Variant annotation tool
annotation
ngs
variants
updated 8.1 years ago by
Zaag
▴ 860 • written 8.1 years ago by
agata88
▴ 870
0
votes
3
replies
1.4k
views
Why do I have displacement in results?
DNA
NGS
mapping
8.1 years ago by
agata88
▴ 870
0
votes
0
replies
1.4k
views
avdbsnp144 not compatible with chromosome coordinates
next-gen-sequencing
updated 21 months ago by
Ram
43k • written 8.4 years ago by
agata88
▴ 870
11
votes
6
replies
3.8k
views
normalization of NGS results
next-gen
normalization
dna-seq
updated 18 months ago by
Ram
43k • written 8.8 years ago by
agata88
▴ 870
92 results • Page
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