User: Lila M

4

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3

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2.9k

views

samtofasq picard validatesamfile

updated 7 days ago by Pierre Lindenbaum 161k • written 7 days ago by Lila M ★ 1.2k

3

votes

12

replies

599

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ucsc getfasta fasta

6 weeks ago by Lila M ★ 1.2k

0

votes

4

replies

322

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exon UCSC coding

updated 7 weeks ago by Pierre Lindenbaum 161k • written 7 weeks ago by Lila M ★ 1.2k

1

vote

3

replies

399

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bedtools bed intersect

8 weeks ago by Lila M ★ 1.2k

0

votes

1

reply

251

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RNA-seq fusion-genes

updated 3 months ago by Yogi ▴ 70 • written 3 months ago by Lila M ★ 1.2k

1

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13

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1.5k

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mutation name gene variant

11 months ago by Lila M ★ 1.2k

7

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8

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1.4k

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amplicon fna primers

updated 17 months ago by Juan MONROY-NIETO ▴ 30 • written 17 months ago by Lila M ★ 1.2k

3

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4

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945

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insertion grep dyplr

2.5 years ago by Lila M ★ 1.2k

0

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0

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614

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chipseeker peakannotation

2.7 years ago by Lila M ★ 1.2k

7

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15

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2.2k

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mapping coverage DNA genomic

updated 2.7 years ago by ATpoint 82k • written 2.7 years ago by Lila M ★ 1.2k

9

votes

13

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3.7k

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bbduk error

updated 2.9 years ago by h.mon 35k • written 2.9 years ago by Lila M ★ 1.2k

3

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3

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2.5k

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nanopore

updated 14 months ago by Ram 43k • written 2.9 years ago by Lila M ★ 1.2k

0

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3

replies

774

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bfast mapping index

updated 2.9 years ago by JC 13k • written 2.9 years ago by Lila M ★ 1.2k

0

votes

3

replies

696

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map colourspace bowtie

updated 2.9 years ago by GenoMax 142k • written 2.9 years ago by Lila M ★ 1.2k

7

votes

3

replies

4.2k

views

fastq bowtie2

updated 2.9 years ago by ATpoint 82k • written 2.9 years ago by Lila M ★ 1.2k

2

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4

replies

916

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coordinates homology sequences blast

3.0 years ago by Lila M ★ 1.2k

0

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8

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1.4k

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homology regions genomic

updated 21 months ago by Ram 43k • written 3.0 years ago by Lila M ★ 1.2k

0

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0

replies

630

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plot profile metagene

3.1 years ago by Lila M ★ 1.2k

1

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8

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1.5k

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bedtools transcribed peaks not_trasncribed

updated 3.1 years ago by ATpoint 82k • written 3.1 years ago by Lila M ★ 1.2k

0

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2

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1.4k

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homer peaks tss

3.1 years ago by Lila M ★ 1.2k

0

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1

reply

1.0k

views

RNAseq cancer

updated 14 months ago by Ram 43k • written 3.1 years ago by Lila M ★ 1.2k

1

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0

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557

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RNA-Seq correlation mutation

3.2 years ago by Lila M ★ 1.2k

0

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4

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590

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RNA-Seq DESeq expression gene

3.2 years ago by Lila M ★ 1.2k

4

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2

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5.8k

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RNA-Seq HTSeq DEXSeq

updated 3.2 years ago by Biostar 20 • written 7.0 years ago by Lila M ★ 1.2k

1

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18

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1.3k

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RNA-Seq software error R expression

updated 3.3 years ago by rpolicastro 13k • written 3.3 years ago by Lila M ★ 1.2k

4

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2

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878

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R RNA-Seq DESeq expersion

updated 3.3 years ago by rpolicastro 13k • written 3.3 years ago by Lila M ★ 1.2k

0

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2

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707

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correlation interdependence gene distance

3.4 years ago by Lila M ★ 1.2k

3

votes

2

replies

994

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ChIP-Seq peak distance genome

updated 3.5 years ago by Alex Reynolds 35k • written 3.5 years ago by Lila M ★ 1.2k

4

votes

5

replies

1.7k

views

expresion statistic R

updated 3.6 years ago by Biostar 20 • written 7.2 years ago by Lila M ★ 1.2k

15

votes

15

replies

6.1k

views

deeptools computeMatrix bigwig coverage

updated 3.0 years ago by bli • 0 • written 5.3 years ago by Lila M ★ 1.2k

6

votes

8

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4.7k

views

R ggplot2 smooth plot ChIP-Seq

updated 4.3 years ago by Biostar 20 • written 7.4 years ago by Lila M ★ 1.2k

0

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0

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1.1k

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metagenomic confunding multivariate Maaslin

4.5 years ago by Lila M ★ 1.2k

0

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7

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1.2k

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resamplig unbalanced samples

4.6 years ago by Lila M ★ 1.2k

0

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0

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1.3k

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abundance microbiome boxplot ZIBR

4.7 years ago by Lila M ★ 1.2k

0

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3

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934

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aCGH microarray

4.8 years ago by Lila M ★ 1.2k

0

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1

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824

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longitudinal data summary plot

4.8 years ago by Lila M ★ 1.2k

0

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0

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760

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Bracken metagenomics microbiome Dirichlet model

4.8 years ago by Lila M ★ 1.2k

0

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3

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1.4k

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OTUs metagenomic microbiome

updated 4.8 years ago by antonioggsousa 3.2k • written 4.8 years ago by Lila M ★ 1.2k

2

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3

replies

835

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methylation colorectal public data data

updated 4.9 years ago by jared.andrews07 ★ 16k • written 4.9 years ago by Lila M ★ 1.2k

17

votes

18

replies

2.9k

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R coalesce harmonization data cleaning

updated 4.9 years ago by Friederike 8.9k • written 4.9 years ago by Lila M ★ 1.2k

5

votes

4

replies

1.2k

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coverage differences tss

updated 5.0 years ago by Biostar 20 • written 5.2 years ago by Lila M ★ 1.2k

3

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3

replies

1.1k

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affy microarray loess normalization

5.0 years ago by Lila M ★ 1.2k

2

votes

1

reply

1.1k

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reliscan ratio repliseq

updated 5.0 years ago by Biostar 20 • written 5.9 years ago by Lila M ★ 1.2k

12

votes

7

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3.8k

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bedtools genomecov mouse

updated 5.1 years ago by ATpoint 82k • written 5.1 years ago by Lila M ★ 1.2k

0

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0

replies

1.1k

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ID reference GEO gene ID

5.1 years ago by Lila M ★ 1.2k

2

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2

replies

1.9k

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DEXseq RNAseq Ensamble gencode DEU

updated 5.1 years ago by vida.t • 0 • written 5.3 years ago by Lila M ★ 1.2k

6

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4

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2.4k

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coverage readdepth interesct

5.3 years ago by Lila M ★ 1.2k

2

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3

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1.4k

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ggplot TSS coverage ratio

5.3 years ago by Lila M ★ 1.2k

0

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0

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1.0k

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wig GROseq TSSprofile deepTools

5.3 years ago by Lila M ★ 1.2k

16

votes

13

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2.8k

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RNA-Seq HTSeq replication correlation

updated 5.3 years ago by Nicolas Rosewick 11k • written 5.3 years ago by Lila M ★ 1.2k