User: Lila M

48

votes

14

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21k

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8 follow

RNA-Seq merge QC

updated 5.5 years ago by blueskypie ▴ 70 • written 6.6 years ago by Lila M ★ 1.2k

9

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9

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3.2k

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GATK VC RNA-Seq

5.6 years ago by Lila M ★ 1.2k

20

votes

15

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1.7k

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R convergence points

updated 5.7 years ago by Alex Reynolds 35k • written 5.7 years ago by Lila M ★ 1.2k

2

votes

2

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1.4k

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multiBigwigSummary deepTools score

updated 5.7 years ago by Devon Ryan 104k • written 5.7 years ago by Lila M ★ 1.2k

1

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2

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1.2k

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bigwig annotation quantification RNAPOL

updated 5.7 years ago by venu 7.1k • written 5.7 years ago by Lila M ★ 1.2k

0

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0

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834

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repli-seq ucsc-tables ucsc

5.8 years ago by Lila M ★ 1.2k

4

votes

1

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6.9k

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RNA-Seq DESeq2

updated 5.9 years ago by Lisa Ha ▴ 120 • written 5.9 years ago by Lila M ★ 1.2k

10

votes

7

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3.9k

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BSgenome GRanges

updated 6.3 years ago by Devon Ryan 104k • written 6.3 years ago by Lila M ★ 1.2k

27

votes

33

replies

17k

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RNA-Seq STAR single-end

updated 6.4 years ago by Hussain Ather ▴ 990 • written 6.4 years ago by Lila M ★ 1.2k

5

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12

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5.7k

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fastqc RNA-Seq single-end overrepresented

6.4 years ago by Lila M ★ 1.2k

2

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4

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1.5k

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workshop genome perl python R

6.4 years ago by Lila M ★ 1.2k

2

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4

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2.1k

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RNAseq alignment index STAR

updated 6.4 years ago by arta ▴ 670 • written 6.4 years ago by Lila M ★ 1.2k

4

votes

13

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4.3k

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paired-end single-end sequencing library

updated 6.4 years ago by Devon Ryan 104k • written 6.4 years ago by Lila M ★ 1.2k

2

votes

6

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1.7k

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DEXSeq error DEU RNAseq

6.5 years ago by Lila M ★ 1.2k

6

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4

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2.6k

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DESEq2 Ensembl identifiers annotation

6.5 years ago by Lila M ★ 1.2k

4

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3

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8.0k

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RNA-Seq fastqc cutadapt trimming paired-end

6.5 years ago by Lila M ★ 1.2k

0

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1

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1.4k

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RNA-Seq paired-end adapters quality control

6.5 years ago by Lila M ★ 1.2k

8

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8

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6.8k

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RNA-Seq salmon quantification R error txtimport

6.6 years ago by Lila M ★ 1.2k

3

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2

replies

3.8k

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RNA-Seq Salmon htseq-count DE

updated 6.6 years ago by Kristoffer Vitting-Seerup ★ 4.0k • written 6.6 years ago by Lila M ★ 1.2k

3

votes

3

replies

2.5k

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R biomart annotation data frame

updated 6.6 years ago by Kevin Blighe 87k • written 6.6 years ago by Lila M ★ 1.2k

3

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5

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3.7k

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DEXseq RNA-Seq exon

6.6 years ago by Lila M ★ 1.2k

3

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6

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2.3k

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DESeq RNA RNA-Seq expression

updated 6.7 years ago by Devon Ryan 104k • written 6.7 years ago by Lila M ★ 1.2k

2

votes

11

replies

3.8k

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comparation p-value R

updated 6.7 years ago by theobroma22 ★ 1.2k • written 6.7 years ago by Lila M ★ 1.2k

1

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1

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1.5k

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ngsplot genome ngs.plot.r s.pmbe

updated 6.7 years ago by Alastair Kerr 5.3k • written 7.2 years ago by Lila M ★ 1.2k

5

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3

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4.4k

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RNA-Seq coverage exon

6.7 years ago by Lila M ★ 1.2k

5

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9

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3.3k

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replication origin transcription

6.8 years ago by Lila M ★ 1.2k

6

votes

10

replies

2.9k

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RNA-Seq GATK VC variant calling

updated 6.8 years ago by Samuel Brady ▴ 330 • written 6.8 years ago by Lila M ★ 1.2k

4

votes

7

replies

1.5k

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RNA-Seq enriched mutation

updated 6.8 years ago by Istvan Albert 100k • written 6.8 years ago by Lila M ★ 1.2k

2

votes

2

replies

1.9k

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RNA-Seq pheatmap heatmap vsd fold change

updated 6.8 years ago by Devon Ryan 104k • written 6.8 years ago by Lila M ★ 1.2k

0

votes

2

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1.2k

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DEXseq dexseq_count TCGA

updated 6.9 years ago by Istvan Albert 100k • written 6.9 years ago by Lila M ★ 1.2k

1

vote

4

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3.4k

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RNA-Seq exon bam

updated 6.9 years ago by Kristoffer Vitting-Seerup ★ 4.0k • written 7.0 years ago by Lila M ★ 1.2k

0

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4

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1.2k

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RNA-Seq coverage gene

6.9 years ago by Lila M ★ 1.2k

1

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1

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2.6k

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RNA-Seq exon coverage multicov bedtools

updated 6.9 years ago by Devon Ryan 104k • written 6.9 years ago by Lila M ★ 1.2k

2

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5

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1.6k

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R data frame coverage

updated 7.0 years ago by Rashedul Islam ▴ 470 • written 7.0 years ago by Lila M ★ 1.2k

1

vote

7

replies

3.2k

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ChIP-Seq peaks gene bed

updated 7.1 years ago by ivivek_ngs ★ 5.2k • written 7.1 years ago by Lila M ★ 1.2k

1

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2

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2.8k

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RNA-Seq CpG promoters

7.1 years ago by Lila M ★ 1.2k

3

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18

replies

4.2k

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TATA homer gene

updated 10 months ago by Ram 43k • written 7.1 years ago by Lila M ★ 1.2k

3

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5

replies

1.1k

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cance gene mutation lost database

7.1 years ago by Lila M ★ 1.2k

1

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9

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2.0k

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ID gene name UCSC

7.1 years ago by Lila M ★ 1.2k

9

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7

replies

2.2k

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ChIP-Seq annotation genome ChIPseeker non-coding

updated 7.2 years ago by Guangchuang Yu ★ 2.6k • written 7.2 years ago by Lila M ★ 1.2k

3

votes

2

replies

2.6k

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ChIPseeker pombe TxDB GRanges Metadata

updated 7.2 years ago by ddiez ★ 2.0k • written 7.2 years ago by Lila M ★ 1.2k

10

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11

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1.7k

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ChIP-Seq R if else loop

7.2 years ago by Lila M ★ 1.2k

0

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2

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1.6k

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sequencing strand TSS TES coverage

updated 7.2 years ago by Alex Reynolds 35k • written 7.2 years ago by Lila M ★ 1.2k

5

votes

4

replies

1.9k

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ChIP-Seq bed deepTools coverage edit

7.2 years ago by Lila M ★ 1.2k

2

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7

replies

9.4k

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ChIP-Seq TES annotation

7.2 years ago by Lila M ★ 1.2k

3

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6

replies

1.2k

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gene ChIP-Seq

updated 7.2 years ago by Pierre Lindenbaum 161k • written 7.2 years ago by Lila M ★ 1.2k

3

votes

2

replies

1.6k

views

ChIP-Seq annotation deepTools R ChIPseeker

updated 7.2 years ago by Devon Ryan 104k • written 7.2 years ago by Lila M ★ 1.2k

0

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2

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5.6k

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GO clueGO Cytoscape

7.3 years ago by Lila M ★ 1.2k

0

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4

replies

1.5k

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ChIP-Seq bam bamsignal bioconductor R

updated 7.3 years ago by GenoMax 141k • written 7.3 years ago by Lila M ★ 1.2k

0

votes

4

replies

5.6k

views

R tree

updated 20 months ago by Ram 43k • written 8.5 years ago by Lila M ★ 1.2k