Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : questions
1
vote
1
reply
749
views
Exon often targeted by mobile element insertions?
epigenetics biology
updated 17 months ago by 4.1k • written 17 months ago by ★ 3.0k
5
votes
4
replies
1.2k
views
Filter out ALT contigs from CRAM
CRAM
updated 19 months ago by 102k • written 19 months ago by ★ 3.0k
11
votes
6
replies
1.4k
views
Medical genetics server for a developing country
server
updated 20 months ago by ★ 3.5k • written 20 months ago by ★ 3.0k
4
votes
4
replies
4.3k
views
Filtering long indels from VCF
VCF
updated 23 months ago by ▴ 480 • written 3.8 years ago by ★ 3.0k
4
votes
4
replies
1.1k
views
Request for a linkage analysis tutorial
linkage
updated 23 months ago by 152k • written 23 months ago by ★ 3.0k
1
vote
2
replies
1.1k
views
Manta and alignment name collision
SV
2.3 years ago by German.M.Demidov ★ 3.0k
0
votes
2
replies
1.2k
views
GIAB and GRCh38 SV/CNV
benchmarking
2.4 years ago by German.M.Demidov ★ 3.0k
2
votes
3
replies
1.0k
views
Resource for Enhancers for the gene X in different tissues
epigenetics
updated 2.6 years ago by ★ 3.1k • written 2.6 years ago by ★ 3.0k
0
votes
0
replies
627
views
Mouse variation VCF
VCF
2.8 years ago by German.M.Demidov ★ 3.0k
2
votes
2
replies
893
views
CNA calling in mouse tumor-normal WGS
CNV
2.8 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
484
views
COVID GWAS: sample size (for PRS)
gwas
2.8 years ago by German.M.Demidov ★ 3.0k
4
votes
3
replies
1.2k
views
An interpretation of an SV
SV
updated 3.1 years ago by ▴ 30 • written 3.1 years ago by ★ 3.0k
1
vote
0
replies
583
views
Relatedness with KING vs heterogeneous data
relatedness
3.2 years ago by German.M.Demidov ★ 3.0k
1
vote
2
replies
1.1k
views
Inter-chromosome translocations in short read WGS
SV
updated 3.3 years ago by ★ 4.2k • written 3.3 years ago by ★ 3.0k
1
vote
2
replies
853
views
Fast genotyping for PRS calculation
PRS
3.4 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
816
views
Array variant to reference-standard way
genotyping
3.8 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
851
views
KING struggle: Relatedness
king relatedness
3.9 years ago by German.M.Demidov ★ 3.0k
2
votes
3
replies
1.1k
views
Genotyping variants from BAM (human)
genotyping
updated 3.9 years ago by 152k • written 3.9 years ago by ★ 3.0k
2
votes
5
replies
2.0k
views
UMAP and "equal" objects
visualization
updated 4.1 years ago by • 0 • written 4.1 years ago by ★ 3.0k
1
vote
2
replies
1.9k
views
KING relatedness inference working way too long...
large-cohort
4.1 years ago by German.M.Demidov ★ 3.0k
2
votes
2
replies
1.2k
views
Asking for papers: rare variants of potentially moderate impact
human disease genetics
4.3 years ago by German.M.Demidov ★ 3.0k
6
votes
10
replies
1.5k
views
Power of differential expression for a single gene analysis
RNA-Seq
4.3 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
576
views
Horizontal sub-windows for IGV
IGV bam
4.4 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
734
views
Genotyping: array variants from WGS
array WGS
4.5 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
945
views
Deviance in allele frequencies between arrays and WGS
GWAS PRS WGS array
4.5 years ago by German.M.Demidov ★ 3.0k
0
votes
4
replies
1.8k
views
CNAs calling in tumor-normal WGS data
CNA tumor-normal WGS
updated 4.7 years ago by 89k • written 4.7 years ago by ★ 3.0k
0
votes
1
reply
748
views
NGS-based diagnostics: regulatory regions catalogue
non-coding genome medicine
updated 4.8 years ago by 20 • written 4.9 years ago by ★ 3.0k
4
votes
5
replies
1.7k
views
Preparing files to call by Manta
manta sv bam fastq
5.0 years ago by German.M.Demidov ★ 3.0k
4
votes
3
replies
1.2k
views
Strand Specificity of Mutations
snv
5.0 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
862
views
FreeBayes and mosaic variants
snv somatic
5.2 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
663
views
Linkage analysis from 3 VCFs?
linkage vcf WGS
5.2 years ago by German.M.Demidov ★ 3.0k
4
votes
6
replies
1.4k
views
Find covered regions in a set of BAM files
coverage WES
5.2 years ago by German.M.Demidov ★ 3.0k
4
votes
8
replies
1.8k
views
bcftools merge fails: Only fixed-length vectors are supported
bcftools mutli-sample VCF
updated 5.3 years ago by ★ 3.3k • written 5.3 years ago by ★ 3.0k
5
votes
5
replies
1.5k
views
Whole intron deletion?
NGS WES SV
updated 5.3 years ago by 166k • written 5.3 years ago by ★ 3.0k
5
votes
1
reply
928
views
Clinics and Mobile Elements in WES data
MEI WES
updated 5.3 years ago by ▴ 30 • written 5.3 years ago by ★ 3.0k
1
vote
2
replies
1.1k
views
Population Genetics: Identity by State measure
snp SNP
5.4 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
811
views
Cancer association studies and CNAs
Cnv Tumor
5.4 years ago by German.M.Demidov ★ 3.0k
5
votes
5
replies
2.8k
views
SNP array CNV calling for Cancer tissue (.CEL files)
SNP microarray
updated 2.1 years ago by 45k • written 6.3 years ago by ★ 3.0k
5
votes
10
replies
1.5k
views
Clear deletion in arrays - no signal in NGS
cnv
5.6 years ago by German.M.Demidov ★ 3.0k
5
votes
8
replies
3.6k
views
ExomeDepth failure to run
cnv exomedepth
updated 5.6 years ago by ▴ 700 • written 5.6 years ago by ★ 3.0k
2
votes
4
replies
1.5k
views
Snp array intensity
Cnv Microarray
updated 17 months ago by 45k • written 5.6 years ago by ★ 3.0k
1
vote
0
replies
902
views
Reference Allele Bias
snv
5.7 years ago by German.M.Demidov ★ 3.0k
2
votes
6
replies
2.1k
views
Extract allele read counts for heterozygous positions in VCF
vcf
updated 5.8 years ago by ★ 3.7k • written 5.8 years ago by ★ 3.0k
0
votes
8
replies
2.4k
views
Number of Tandem and Interspersed duplications
CNV duplication SV
updated 5.8 years ago by ★ 3.0k • written 5.8 years ago by ★ 3.0k
10
votes
17
replies
5.0k
views
Ploidy Correction In NGS cancer data (human)
CNV ploidy cancer
6.1 years ago by German.M.Demidov ★ 3.0k
0
votes
0
replies
920
views
Pathway Annotation, grouping of sparse data on pathway level
pathway
6.4 years ago by German.M.Demidov ★ 3.0k
3
votes
14
replies
3.4k
views
Paired DMR methylation caller
bisulfite DMR
updated 6.6 years ago by 8.3k • written 6.6 years ago by ★ 3.0k
0
votes
0
replies
1.3k
views
Visualize B-allele frequency on IGV for 2 samples
igv
updated 2.3 years ago by 45k • written 6.7 years ago by ★ 3.0k
0
votes
3
replies
1.4k
views
Enrichment platforms for 1000GP exome data
data WES
6.8 years ago by German.M.Demidov ★ 3.0k
7
votes
19
replies
3.0k
views
Inconsistent Coverage on X chromosome between genders
coverage WES
7.6 years ago by German.M.Demidov ★ 3.0k
53 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6