updated 6 days ago by
GenoMax
142k
•
written 6 days ago by
ahmad.sajad4541
•
0
2
votes
2
replies
221
views
0
votes
0
replies
133
views
6 days ago by
marco.barr
▴
100
0
votes
0
replies
324
views
4
votes
2
replies
245
views
updated 5 days ago by
Ram
43k
•
written 7 days ago by
carolofharvest
▴
40
13
votes
14
replies
809
views
updated 2 days ago by
t.montserrat.ayuso
▴
40
•
written 11 days ago by
carolofharvest
▴
40
0
votes
2
replies
254
views
0
votes
0
replies
149
views
1
vote
1
reply
191
views
updated 5 days ago by
Ram
43k
•
written 7 days ago by
adi.gershon1
•
0
3
votes
5
replies
290
views
0
votes
5
replies
372
views
6 follow
updated 7 days ago by
b.contreras.moreira
▴
180
•
written 7 days ago by
JH
•
0
1
vote
3
replies
292
views
0
votes
0
replies
140
views
7 days ago by
Amos Bairoch
▴
120
2
votes
3
replies
295
views
0
votes
0
replies
149
views
0
votes
2
replies
732
views
updated 7 days ago by
clairechung112
•
0
•
written 23 months ago by
amahdi779
•
0
1
vote
3
replies
279
views
updated 7 days ago by
Alex Reynolds
35k
•
written 7 days ago by
SJP
•
0
0
votes
0
replies
136
views
0
votes
1
reply
189
views
1
vote
3
replies
244
views
updated 7 days ago by
jared.andrews07
★
16k
•
written 7 days ago by
yvonneh
▴
10
3
votes
5
replies
341
views
3
votes
8
replies
6.6k
views
7 follow
updated 7 days ago by
Sd
•
0
•
written 5.1 years ago by
Nicolas Rosewick
11k
0
votes
2
replies
208
views
3
votes
8
replies
607
views
updated 3 days ago by
Chris Dean
▴
410
•
written 7 days ago by
sovrappensiero
▴
100
1
vote
2
replies
246
views
3
votes
8
replies
525
views
0
votes
1
reply
521
views
0
votes
1
reply
161
views
updated 7 days ago by
Mensur Dlakic
★
27k
•
written 7 days ago by
Arun Sai Kumar
•
0
1
vote
1
reply
170
views
1
vote
1
reply
178
views
updated 7 days ago by
jared.andrews07
★
16k
•
written 8 days ago by
Oburah
•
0
0
votes
6
replies
316
views
5
votes
5
replies
286
views
updated 7 days ago by
atharvakarkare14
▴
30
•
written 8 days ago by
Begonia_pavonina
▴
150
1
vote
7
replies
460
views
3
votes
3
replies
337
views
0
votes
0
replies
103
views
0
votes
0
replies
109
views
updated 7 days ago by
Ram
43k
•
written 8 days ago by
carlopecoraro2
★
2.5k
0
votes
1
reply
233
views
0
votes
0
replies
157
views
1
vote
1
reply
148
views
updated 7 days ago by
Ram
43k
•
written 8 days ago by
marco.barr
▴
100
0
votes
0
replies
99
views
10
votes
14
replies
662
views
6 follow
updated 2 days ago by
GenoMax
142k
•
written 8 days ago by
nicole.kavanagh
•
0
0
votes
1
reply
284
views
updated 8 days ago by
Scooter
▴
280
•
written 14 days ago by
avocado123
•
0
0
votes
0
replies
103
views
8 days ago by
James
▴
10
0
votes
1
reply
594
views
1
vote
3
replies
249
views
updated 7 days ago by
barslmn
★
2.1k
•
written 8 days ago by
poordumbsillyidiot
•
0
0
votes
1
reply
216
views
0
votes
0
replies
103
views
0
votes
0
replies
129
views
0
votes
7
replies
578
views
0
votes
1
reply
233
views
1
vote
3
replies
323
views
updated 8 days ago by
ATpoint
82k
•
written 9 days ago by
jagdish7921
•
0
Recent Votes
Recent Locations •
All
India, just now
Singapore, just now
Netherlands, just now
France, 1 minute ago
WCIP | Glasgow | UK, 2 minutes ago
The Netherlands, 2 minutes ago
Munich, 3 minutes ago
Recent Awards •
All
Popular Question to
melissachua90
▴
70
Popular Question to
Lila M
★
1.2k
Popular Question to
Amr
▴
160
Commentator to
rpolicastro
13k
Popular Question to
singcell
•
0
Teacher to
Gordon Smyth
★
7.1k
Popular Question to
anithanagaraj93
▴
10
Recent Replies
Comment: UMI-Tools knee-method has great influence on the results of white list
by
Assa Yeroslaviz
★
1.8k
and if I use the command as such:
```
umi_tools extract --extract-method=regex --error-correct-cell \
--bc-pattern2='(?P…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
i.sudbery
19k
No, UMI-tools won't work this out automatically, you'll need to either switch read1 and read2 or use the new `--read2-only` which is curren…
Comment: Correlation Analysis
by
manaswwm
▴
510
If your *gene_corr* data frame contains one gene instead of all genes, then the correlation would be per gene. If your *gene_corr* data fra…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
Assa Yeroslaviz
★
1.8k
I think I might know my problem. The barcodes are in this case on read2 and not on read1. Does umi-tools recognise it automatically, or do …
Comment: Microbial Signal Transduction Database
by
zx8754
11k
Did you try https://mib-jouline-db.asc.ohio-state.edu/#introduction ?
>The database can also be accessed via the API. The same API points …
Answer: CNVKIT - unable to produce scatter and diagram pdfs
by
Anitha
•
0
Thank you for the information.
Comment: LncRNA Nomenclature
by
jain72744
▴
10
My data is based on gene counts and the respective gene IDs are given so I should work with ENSGs?
lncRNA_transcripts <- getBM(attributes …
Answer: DESeq2 error
by
ATpoint
82k
At least one group needs replication. That is the short answer. For a longer answer add details on experimental design.
Comment: When should I use R-MarkDown over R-Script ?
by
ATpoint
82k
Why particular question?
Rmarkdown is a composite of markdown and code. You can nicely separate free text, explanation, comments etc. from…
Comment: LncRNA Nomenclature
by
ATpoint
82k
RNA-seq is typically analyzed on gene rather than transcript level. Are your counts gene or transcript?
Comment: EdgeR - relationship between logFC and coefficients
by
gBioStar5
▴
10
Thanks a lot, this was very helpful. I'll keep that in mind.
Answer: EdgeR - relationship between logFC and coefficients
by
Gordon Smyth
★
7.1k
Results presented by topTags() are on the log2 scale. Coefficients stored internally in the DGELRT object are on the loge scale. If you con…
Answer: Importing a fastq file
by
size_t
▴
120
run command `explorer.exe .` in wsl terminal, and then drag file to folder
Comment: Contig assembly task, errors
by
Philipp Bayer
8.4k
Hi Ricardo! CAP3 is an 'older' overlap assembler from 1999 which is perfectly suited for these kinds of 'small' tasks. I used it last in my…
Comment: absolute path for symbolic links in Snakefile
by
Jesse
▴
770
That's really handy, and much more of a general solution than stripping off the directory names! So yifangt86, if you're on Linux you can …
Traffic: 2419 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6