0
votes
2
replies
263
views
0
votes
5
replies
370
views
updated 8 days ago by
GenoMax
142k
•
written 9 days ago by
Bertalan_Takacs
▴
90
0
votes
0
replies
148
views
updated 9 days ago by
Ram
43k
•
written 9 days ago by
glaciya2018
•
0
0
votes
0
replies
311
views
0
votes
1
reply
171
views
updated 9 days ago by
Sofia
•
0
•
written 9 days ago by
mawigoj318
•
0
0
votes
0
replies
149
views
9 days ago by
salias
•
0
0
votes
5
replies
366
views
updated 6 days ago by
Istvan Albert
100k
•
written 9 days ago by
sehriban.buyukkilic
▴
10
0
votes
0
replies
128
views
updated 9 days ago by
Ram
43k
•
written 9 days ago by
newuser2024
•
0
1
vote
2
replies
247
views
8 days ago by
ahmad.sajad4541
•
0
0
votes
0
replies
119
views
0
votes
1
reply
168
views
updated 9 days ago by
Mensur Dlakic
★
27k
•
written 10 days ago by
benguyarenbeyaz98
•
0
2
votes
2
replies
297
views
updated 9 days ago by
Ram
43k
•
written 10 days ago by
v.berriosfarias
▴
140
2
votes
9
replies
880
views
0
votes
11
replies
603
views
0
votes
1
reply
181
views
updated 10 days ago by
bk11
★
2.4k
•
written 10 days ago by
alphaflylizard
•
0
0
votes
0
replies
106
views
10 days ago by
ohtang7
▴
40
0
votes
1
reply
181
views
0
votes
5
replies
362
views
0
votes
0
replies
102
views
0
votes
0
replies
110
views
1
vote
3
replies
256
views
1
vote
3
replies
296
views
9 days ago by
Art1ess
•
0
0
votes
1
reply
178
views
updated 10 days ago by
bk11
★
2.4k
•
written 10 days ago by
Susmita Mandal
▴
110
1
vote
1
reply
188
views
0
votes
0
replies
98
views
0
votes
1
reply
154
views
updated 11 days ago by
Ram
43k
•
written 11 days ago by
Cameron.walker9900
•
0
0
votes
8
replies
378
views
0
votes
0
replies
115
views
updated 11 days ago by
Ram
43k
•
written 11 days ago by
maxime.policarpo
▴
200
0
votes
0
replies
102
views
0
votes
0
replies
106
views
0
votes
0
replies
212
views
1
vote
3
replies
2.5k
views
updated 11 days ago by
chrchang523
10k
•
written 6.2 years ago by
Ginevra
▴
10
1
vote
8
replies
461
views
3 days ago by
marco.barr
▴
90
0
votes
1
reply
148
views
0
votes
10
replies
501
views
0
votes
1
reply
138
views
0
votes
0
replies
95
views
11 days ago by
manaswwm
▴
510
0
votes
0
replies
84
views
0
votes
0
replies
90
views
2
votes
4
replies
325
views
0
votes
0
replies
91
views
11 days ago by
Gerard
•
0
0
votes
1
reply
172
views
0
votes
0
replies
82
views
11 days ago by
kl
▴
10
0
votes
0
replies
103
views
11 days ago by
Enrique
•
0
0
votes
0
replies
82
views
11 days ago by
sativus
▴
20
0
votes
0
replies
87
views
0
votes
0
replies
141
views
updated 11 days ago by
Carlo Yague
8.7k
•
written 11 days ago by
Atul K.
•
0
2
votes
5
replies
485
views
0
votes
0
replies
145
views
updated 12 days ago by
Ram
43k
•
written 12 days ago by
sainavyav22
•
0
0
votes
0
replies
150
views
Recent Votes
Recent Locations •
All
United States, just now
Canada, 1 minute ago
United States, 2 minutes ago
United States, 2 minutes ago
United States, 8 minutes ago
United States, 13 minutes ago
Russia, 28 minutes ago
Recent Awards •
All
Popular Question to
SHN
▴
40
Popular Question to
Rob
▴
170
Popular Question to
curious
▴
750
Popular Question to
M.
▴
30
Student to
carolofharvest
▴
30
Commentator to
e.r.zakiev
▴
210
Recent Replies
Answer: Easy way to find out which allele is minor allele from bed file?
by
chrchang523
10k
This question does not make sense. If you care about allele-order "information [being] lost in downstream applications", REF/ALT is the ob…
Answer: visualize GSEA
by
bk11
★
2.4k
I have made some edits in your code basically changing the position of text and commented out the line `data$text_pos <- ifelse(data$NES > …
Comment: Differential Expression Analysis using DESeq2 in R
by
swbarnes2
14k
Pictures of code are useless. You were told to paste the code and use the 0101 button. Can you explain why you decided not to do that?
If…
Comment: Differential Expression Analysis using DESeq2 in R
by
Erina
•
0
![Here is the code I am using for the analysis][1]
[1]: /media/images/8a511904-6ae8-47f5-b647-ee15b02b
Answer: Clarification regarding SAM flags "mate reverse strand" (flag 16/0x10) and "read
by
swbarnes2
14k
In paired end sequencing, every read has a mate, and the flags all together tell you not only what is up with the read you are looking at, …
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
by
Mbofire
•
0
I need assistance don't know what to do next after signing up
Comment: Easy way to find out which allele is minor allele from bed file?
by
curious
▴
750
According to the link:
"When *generating* such filesets, PLINK 1.x defaults to swapping the alleles whenever A1's frequency is above (not …
Comment: TaxID mapping file
by
GenoMax
142k
nodesDB file should have been installed if you had used "Install" script for `blobtools` according to : https://blobtools.readme.io/docs/ta…
Comment: Parametric or non-parametric tests for qPCR significance testing between treatme
by
e.r.zakiev
▴
210
obviously if the values are really sampled from a (quasi) normally-distributed values, then n doesn't matter, he could use t-test even with…
Comment: Converting CRAM to FastQ
by
GenoMax
142k
You can use any reference that you like at this point. Since you are planning to use GATK, you can get their version from the resource bund…
Comment: Converting CRAM to FastQ
by
Maverick
▴
10
![enter image description here][1]I was able to get my fastq files. I can see that my reference files are cached in a hts-ref directory but…
Comment: Differential Expression Analysis using DESeq2 in R
by
swbarnes2
14k
Okay, that shows us the problem, but not what we need to solve it.
But, for instance, are you sure that period after the sample name shou…
Comment: Easy way to find out which allele is minor allele from bed file?
by
bk11
★
2.4k
In the case of MAF = 0.5, I think A1 is still the minor allele. You can check the discussion in this [link][1].
[1]: https://groups.goo…
Comment: Easy way to find out which allele is minor allele from bed file?
by
curious
▴
750
Yes, but I think the problem is what to do when MAF = 0.5
Traffic: 1568 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6