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462 results • Page 3 of 10
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253
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News: course Reproducible Analysis With R
R Reproducibility analysis Data
6 months ago by carlopecoraro2 ★ 2.3k
0
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0
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277
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News: Virtual Genome Assembly workshop
Genome Workshop assembly Virtual
6 months ago by singh.vijender ▴ 70
10
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4
replies
626
views
News: Good morning
good morning
updated 6 months ago by 97k • written 6 months ago by 84k
6
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7
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2.8k
views
News: New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
DiffBind ChIP-seq deepTools visualization ATAC-seq
6 months ago by Rory Stark ★ 1.7k
0
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0
replies
292
views
News: Sex Chromosome Evolution course
course Genomics
updated 3 months ago by 38k • written 6 months ago by ★ 2.3k
0
votes
0
replies
246
views
News: Online training - Data visualization in R with ggplot2
Visualization ggplot2 R Data
7 months ago by carlopecoraro2 ★ 2.3k
1
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0
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311
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News: Searching for people who can share experience (give free webinars/discuss) on multimodal single cell data
ATAC-seq CITE-seq scRNA-seq
7 months ago by Alexander ▴ 70
0
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0
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269
views
News: Online training - Introduction to Deep Learning for biologists
Python DeepLearning bigdata MachineLearning
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
replies
410
views
News: 2023 EMBL Courses and Conferences
EMBL EMBLMalaria EESImaging
7 months ago by EMBL Events • 0
0
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0
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275
views
News: Online training -Getting the most out of R
R Science analysis Data
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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276
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News: Online training - Cancer Genomics in R
Cancer Genomics R
updated 3 months ago by 38k • written 7 months ago by ★ 2.3k
0
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0
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263
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News: Online training - DNA methylation in plants and animals
OxfordNanopore DNAMethylation BSseq longreads PacBio
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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289
views
News: 3rd edition of the Analysis of RNA sequencing data with R/Bioconductor course.
RNAseq Bioconductor R
8 months ago by carlopecoraro2 ★ 2.3k
4
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1
reply
2.1k
views
News: 2014 ISCB Wikipedia Article Competition announcement
ISCB competition Wikipedia
written 8.6 years ago by ★ 2.0k
1
vote
2
replies
567
views
News: Online training - Introduction to Nextflow
Bionfirmatics Pipeline Workflow Netflow
7 months ago by carlopecoraro2 ★ 2.3k
4
votes
1
reply
396
views
News: Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop ngs data-analysis
updated 8 months ago by 38k • written 8 months ago by 9.9k
0
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0
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367
views
News: Final Call! Tomorrow (7/8) is the Deadline for Phase 1 submissions of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 8 months ago by ▴ 10
0
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0
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310
views
News: Automate your NGS data analyses and create reproducible/scalable pipelines with NextFlow
pipeline Nextflow automation
8 months ago by David Langenberger 9.9k
0
votes
1
reply
722
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News: Hands-On RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq Transcriptomics NGS Workshop
8 months ago by David Langenberger 9.9k
0
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3
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980
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News: Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 9 months ago by ▴ 10
0
votes
0
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284
views
News: EBI Competency Hub Supporting competency-based training and professional development.
ebi carreer
9 months ago by Pierre Lindenbaum 153k
0
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0
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273
views
News: Introduction to Statistics in R for biologists
tydeverse R Statistics
9 months ago by carlopecoraro2 ★ 2.3k
1
vote
0
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279
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News: Data analysis with the Tidyverse in July (18th-21st).
Visualization R Tidyverse data-analysis
updated 8 months ago by 38k • written 9 months ago by ★ 2.3k
1
vote
0
replies
263
views
News: Use your standard DNA variant caller for SNP calling in Bisulfite-Seq data
bisulfite BS-Seq methylation
9 months ago by David Langenberger 9.9k
0
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0
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319
views
News: online training - Data Visualization with Python
Python Data-Visualization
updated 8 months ago by 38k • written 9 months ago by ★ 2.3k
0
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0
replies
350
views
News: Cellosaurus release 42 is available
line cell biocuration knowledgebase database
9 months ago by Amos Bairoch ▴ 110
0
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0
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278
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News: Online course- Reproducibility in Bioinformatics - 11-13 July
Docker Reproducibility
updated 3 months ago by 38k • written 9 months ago by ★ 2.3k
0
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0
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321
views
News: Online statistics courses
R statistics
9 months ago by carlopecoraro2 ★ 2.3k
0
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1
reply
374
views
News: API for accessing SARS-COV-2 genomic data
rpackage sars genomics api covid
updated 9 months ago by 127k • written 9 months ago by • 0
2
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0
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359
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News: UniProt: Annotation of biologically relevant ligands using ChEBI
binding protein site metal uniprot chebi
9 months ago by Elisabeth Gasteiger ★ 2.2k
3
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0
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393
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News: Tutorial on SemiBin (metagenonomics binning tool). June 14 - online
metagenomics binning
updated 10 months ago by 127k • written 10 months ago by ▴ 60
0
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0
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260
views
News: Nanopore direct RNA Sequencing - online course
Sequencing direct Nanopore RNA
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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246
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News: ONLINE COURSE - LINEAR MIXED MODELS IN R - September 26th-30th
Models Mixed R
10 months ago by carlopecoraro2 ★ 2.3k
7
votes
1
reply
457
views
News: NGSymposium - Conference in Computational Biology, 23-24.09
ML statistics conference ngschool
10 months ago by kzkedzierska ▴ 290
0
votes
0
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302
views
News: ONLINE course "Population genomic inference from low-coverage whole-genome sequencing data"
lcWGS Genomics Population
10 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
301
views
News: Online course - Metabarcoding in microbial Ecology
Qiime2 Metabarcoding Microbial-Ecology
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
3
votes
1
reply
388
views
News: Free web seminars related to small non-coding RNA bioinformatics
smallRNA microRNA
updated 3 months ago by 38k • written 10 months ago by ▴ 60
0
votes
0
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300
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News: ONLINE COURSE - RADseq data analysis using Stacks
Phylogenomics Population RADseq Genomics Stacks
10 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
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283
views
News: Online course - Developing R/Bioconductor packages for genomics
Bioconductor R
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
1
vote
0
replies
411
views
News: Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge is now live!
oncopanel indel-calling
updated 3 months ago by 38k • written 10 months ago by ▴ 10
0
votes
2
replies
565
views
News: ClusteredNR NCBI BLAST database provides faster searches and more informative BLAST results
NCBI BLAST
10 months ago by PeterC_NCBI ▴ 210
0
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0
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214
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News: NCBI poster at Bio-IT World on the new cloud BLAST tool, ElasticBLAST
NCBI BLAST ElasticBLAST
11 months ago by PeterC_NCBI ▴ 210
1
vote
0
replies
283
views
News: DATA ANALYSIS WITH THE TIDYVERSE in July (18th-21st).
tidyverse data R analysis
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
380
views
News: Introduction to Nextflow course
Nextflow
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
325
views
News: Online Course - A Practical Introduction to NGS Data Analysis (May 16-18, 2022)
NGS RNA DNA Workshop
11 months ago by David Langenberger 9.9k
6
votes
0
replies
362
views
News: NGSchool2022: Machine Learning in Computational Biology
summer machine learning school ngschool ML statistics
11 months ago by kzkedzierska ▴ 290
0
votes
1
reply
334
views
News: Introduction to Deep Learning course
DeepLearning MachineLearning bigdata
updated 11 months ago by 21k • written 11 months ago by ★ 2.3k
3
votes
3
replies
739
views
News: Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow NGS pipeline
11 months ago by David Langenberger 9.9k
0
votes
0
replies
871
views
News: Pre-Register for the NCTR Indel Calling from Oncopanel Sequencing Data Challenge with FDA’s National Center for Toxicological Research (NCTR) and pre…
oncopanel indel-calling
updated 3 months ago by 38k • written 11 months ago by ▴ 10
0
votes
0
replies
263
views
News: Virtual Genome Assembly Workshop : May 16-19, 2022
assembly Genome Workshop
11 months ago by singh.vijender ▴ 70
462 results • Page 3 of 10
Recent Votes
A: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
smoothing or binning bigWig file
List of Ongoing and Planned Long Read Sequencing studies?
Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum?
Answer: Read lengths greater than insert length
A: Changing Output From Gene ID to Symbol When Running findMarkers from Scran
Answer: BLAST Database error: No alias or index file found for nucleotide database
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Recent Replies
Comment: split fasta file to train deep learning model by shenwei356 7.9k
Excluding sequences containing any letter not belonging to the 20 [amino acids letters](https://github.com/shenwei356/bio/blob/master/seq/a…
Comment: split fasta file to train deep learning model by pinheirofabiano ▴ 10
@shenwei356, thank you very much for your help, perfect! But now I realized that some fasta sequences contain the letter "B", which is ou…
Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI by Mensur Dlakic ★ 23k
I think it depends on the speed of your local disks and the memory amount. On a single node, breaking up the database doesn't sound like a …
Comment: Sample size for population genetics by Jeremy Leipzig 21k
Other populations just make the model harder to generalize, not easier.
Comment: Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum? by Vincent Laufer ★ 2.5k
i think there is some of that - my most upvoted comment of all time was a dismissive comment i made while extremely tired. for context i ha…
Comment: Molecular biologist / clinical pharmacologist (f/m/d) by Jeremy ▴ 770
Is this job on site in Vienna or remote?
Comment: smoothing or binning bigWig file by rls_08 ▴ 40
if you use bigwigCompare , that would not create a sliding window, but instead, it will output the mean for each bin, according to the -bin…
Comment: Sample size for population genetics by zimmer.schweiz • 0
Thank you so much for your answer. For common polygenic diseases, would it make sense to increase the number of populations sampled, in ord…
Answer: Sample size for population genetics by Jeremy Leipzig 21k
For a rare penetrant monogenic disease? A few cases. For a common polygenic disease or trait? 500k-10M
Answer: using GRanges metadata to constrain overlap searches between objects by seidel 11k
Rather than do all overlaps all the time for all samples, why not restrict the data by sample when you can. The code below works about 4 ti…
Comment: How to get gene from PSIBLAST resuts by Tom • 0
Hello, thank you for your answer, I have a question, Why the information from the GFF file and from the feature table is different? I see …
Comment: SNP ID (rsID) to Chr no. and Position by Jewahir • 0
Yeah, thank you for that!!
Comment: 1000 genomes hg38 with dbSNP rsid by Ram 38k
It should be pretty straightforward. Just to save you some pain, run these on the 1000g VCF once you download it: 1. `vt decompose -s` to …
Comment: 1000 genomes hg38 with dbSNP rsid by Vince ▴ 150
Yeah, I had some hope that I wouldn't need to mess with doing this ...
Answer: counting the unmapped reads by chemkhi.ali13 • 0
> Hi all, > > I have a sam file, my supervisor asked me to count the number of > unmapped reads, which command I should use? > > sam…
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