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News: R courses in Berlin
R
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
0
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0
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713
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News: IITM-EBI modelling workshop
ebi iit-madras biomodelling
updated 11 months ago by 43k • written 4.6 years ago by ▴ 10
2
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0
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1.0k
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News: precisionFDA and Georgetown-ICBI are launching the Brain Cancer Predictive Modeling and Biomarker Discovery Challenge!
brain-tumor artificial-intelligence biomarkers
updated 11 months ago by 43k • written 4.6 years ago by ▴ 150
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0
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688
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News: The BioCompute Object (BCO) App-a-thon Submission Period Ends Tomorrow!
app-a-thon biocompute precisionFDA
updated 11 months ago by 43k • written 4.6 years ago by ▴ 150
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1
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1.2k
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News: Course 16S Metabarcoding in Berlin (March 2020)
R Qiime2 Metabarcoding
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
0
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0
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596
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News: The precisionFDA BioCompute Object App-a-thon submission period ends in 1 week!
app-a-thon biocompute precisionFDA
updated 11 months ago by 43k • written 4.6 years ago by ▴ 70
0
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0
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624
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News: Advanced Python course
Genomics Python
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
0
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0
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776
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News: Course - Metabolomics: from study design to data analysis
Metabolomics R Bioconductor
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
2
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0
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861
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News: Course - Landscape Genomics. Berlin
Genomics R
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
3
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0
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1.3k
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News: Nextflow Training Course
Pipeline Workflow NEXTFLOW
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
4
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2
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1.3k
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News: Hands-On Workshop: How to use bisulfite-treated sequencing to study DNA methylation (BS-Seq, Bisulfite-Seq, WGBS)
Workshop methylation bisulfite
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.0k
0
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0
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820
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News: EMBL Conference: In situ Structural Biology - From Cryo-EM to Integrative Modelling
Biophysical-analysis Modelling Structural-Biology
updated 11 months ago by 43k • written 4.6 years ago by ▴ 10
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0
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809
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News: EMBL Conference: From Functional Genomics to Systems Biology
Proteomics Genomic Systems-biology Chromatin
updated 11 months ago by 43k • written 4.6 years ago by ▴ 10
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0
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753
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News: precisionFDA BioCompute App-a-thon October 18th Submission Deadline Reminder!
app-a-thon biocompute precisionFDA
updated 11 months ago by 43k • written 4.6 years ago by ▴ 150
1
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0
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1.2k
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News: Course: GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Assembly Nanopore
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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572
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News: Comparative Genomics course in October - last 2 places left
Illumina Pacbio nanopore next-gen
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
8
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4
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2.0k
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News: supporting vg users on biostars
variation-graph genome vg vgteam
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.4k
0
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0
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1.1k
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News: 9th Programming for Evolutionary Biology Course - March 2-18 2020 in Berlin, Germany
NGS evolution workshop
updated 11 months ago by 43k • written 4.7 years ago by 11k
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0
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841
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News: EMBL PhD programme applications open
phd embl
updated 11 months ago by 43k • written 4.7 years ago by 23k
3
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0
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713
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News: Testing and feedback of upcoming salmon release
salmon RNA-Seq
updated 11 months ago by 43k • written 4.7 years ago by 6.6k
0
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0
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712
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News: Statistics using R
R
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
1
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0
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873
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News: Free Ensembl browser and REST API workshops: Hinxton, Cambridge, UK, 15/16 October 2019
training-course Ensembl workshop
updated 11 months ago by 43k • written 4.7 years ago by ▴ 330
0
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0
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880
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News: Programming with Bash and Python
Unix Bash Programming Python
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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766
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News: Training in Rosetta for Molecular Modeling and Design @NIH
Molecular-Design Modeling RNA-Seq Biomedical
updated 11 months ago by 43k • written 4.7 years ago by ▴ 140
1
vote
0
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751
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News: Cellosaurus release 32 is available
knowledgebase database cell-line
updated 11 months ago by 43k • written 4.7 years ago by ▴ 120
0
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0
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829
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News: FINAL CALL - 'Introduction to NGS Data Analysis' course in Munich, October 23 - 25
NGS RNA-Seq Workshop DNA-Seq
updated 11 months ago by 43k • written 4.7 years ago by 11k
0
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0
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971
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News: R Package design and development and reproducible data science for biologists - FREE ACCOMMODATION
R
updated 11 months ago by 43k • written 4.7 years ago by ▴ 110
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0
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668
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News: Comparative Genomics Workshop . registration deadline
assembly Pacbio
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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766
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News: Interested in learning more about CRISPR Genome Editing?
Genome-Editing CRISPR
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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768
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News: Training in Creating Plots, Graphs and Maps using R @ NIH
Biomedical next-gen Data-analysis
updated 11 months ago by 43k • written 4.7 years ago by ▴ 140
0
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0
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772
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News: EMBO | EMBL Symposium: The Four-Dimensional Genome
microscopy genome DNA genomics
updated 11 months ago by 43k • written 4.7 years ago by ▴ 10
2
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0
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944
views
News: R/Bioconductor for Mass Spectrometry and Proteomics course in Berlin
R Proteomics Bioconductor
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
2
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0
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648
views
News: Introduction to RMarkdown
R
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.5k
0
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0
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700
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News: Coding In The Cloud For Biomedical Researchers - Hands-On Training - Live Cast
next-gen-sequencing rna-seq ChIP-Seq
updated 11 months ago by 43k • written 4.8 years ago by ▴ 140
0
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0
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863
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News: Training in Bioinformatics for Beginners @NIH
omics biomedical
updated 11 months ago by 43k • written 4.8 years ago by ▴ 140
0
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0
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841
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News: EMBL Conference: Expanding the Druggable Proteome with Chemical Biology
pharmacology proteome chemical-biology genetics
updated 11 months ago by 43k • written 4.8 years ago by ▴ 10
0
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0
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763
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News: EMBO | EMBL Symposium: The Organism and its Environment
genotype organisms biological chemical phenotype
updated 11 months ago by 43k • written 4.8 years ago by ▴ 10
0
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0
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762
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News: CFP Special Collection: Parallel Computing in Evolutionary Bioinformatics, SAGE Journal, JCR 2.203 (Q2)
CFP
updated 11 months ago by 43k • written 4.8 years ago by • 0
0
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0
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1.4k
views
News: Webinar: Mapping the single-cell atlas of the bone marrow microenvironment
webinar RNA-Seq next-gen single-cell
updated 11 months ago by 43k • written 4.8 years ago by ▴ 450
3
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1
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955
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News: Do you want to learn how to analyze your genomic data using R and Bioconductor?
Genomics R Bioconductor
updated 11 months ago by 43k • written 4.8 years ago by ★ 2.5k
0
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0
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639
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News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
RNA-Seq sequencing
updated 11 months ago by 43k • written 4.8 years ago by ▴ 140
0
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0
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821
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News: Bioinformatic Analysis of Next Generation Sequencing Data @NIH
RNA-Seq epigenomics ChIP-Seq
updated 11 months ago by 43k • written 4.8 years ago by ▴ 140
0
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0
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652
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News: Webinar: Gen3 Data Exploration
sequence data-science gene
updated 11 months ago by 43k • written 4.8 years ago by ▴ 10
2
votes
0
replies
852
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News: Bioinformatic courses in Canada (Quebec City) this September
Unix Genomics GWAS R Python
updated 11 months ago by 43k • written 4.8 years ago by ★ 2.5k
0
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0
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611
views
News: Interested Phylogenetic comparative methods?
R SNP next-gen
updated 11 months ago by 43k • written 4.8 years ago by ★ 2.5k
0
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0
replies
728
views
News: BIRCH Release 3.50
transcriptomics linux osx genomics
updated 11 months ago by 43k • written 4.8 years ago by ▴ 460
5
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2
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932
views
News: The precisionFDA BioCompute Object App-a-thon has been extended to October 18!
BioCompute challenge
updated 11 months ago by 43k • written 4.8 years ago by ▴ 70
2
votes
0
replies
1.1k
views
News: Metagenomics and Metabarcoding Course @ Edinburgh Genomics
metagenomics metabarcoding course workshop
updated 11 months ago by 43k • written 4.8 years ago by ▴ 40
0
votes
0
replies
1.0k
views
News: RNA-seq Data Analysis Workshop @ Edinburgh Genomics
Linux R RNA-Seq course
updated 11 months ago by 43k • written 4.8 years ago by ▴ 40
0
votes
0
replies
845
views
News: Training in Statistical Analysis using R @NIH,September 4-6,2019
Analysis Statistical r-platform
updated 11 months ago by 43k • written 4.9 years ago by ▴ 140
731 results • Page 8 of 15
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Answer: ChatGPT optimized for bioinformatics questions
Comment: ChatGPT optimized for bioinformatics questions
C: How can I perform Differential expression analysis with just one control and one
C: How can I perform Differential expression analysis with just one control and one
C: How can I perform Differential expression analysis with just one control and one
How can I perform Differential expression analysis with just one control and one cancer sample?
Comment: scRNAseq Differential expression analysis
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Recent Replies
Comment: how to treat the replicates while performing WGCNA by mavy ▴ 10
Thank you so much for your response . Really appreciate it. I will try the way you mentioned and will get back if I have any query
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU by hophuquy0944 • 0
i have the same error, i used high performance computer, here is my code to set memory. srun --nodes=1 --ntasks=1 --cpus-per-task=24 -…
Comment: Overlapping Ranges within Granges object by Alex Reynolds 35k
Yes, `bedmap` will perform operations on one or two BED files.
Comment: B allele frequency (BAF) by aidangcruickshank ▴ 10
Apologies for resurrecting this post, but any idea what that functions "regions" paramater takes? Would it be a GRanges object? The documen…
Comment: How to handle duplicated genes in TCGA data? by Ngrin • 0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2 by swbarnes2 14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Comment: GG Sankey plot by LauferVA 4.2k
@bk11 i changed this comment to an answer. if you disagree please let me know. thanks for sharing your knowledge. VAL
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation by hannes.bongartz • 0
Thanks for the input. Unfortunately, that didn't help either. I appreciate any other tips. Thank you
Answer: GG Sankey plot by bk11 ★ 2.5k
You need to change your data table into a 'long' format. You can do something like this- GOs_childs_recursive <- GOs_childs_recursive …
Answer: Trimming tool by ntsopoul ▴ 60
I use Trim Galore which automatically recognizes adaptors. https://github.com/FelixKrueger/TrimGalore Here is the script I am using for…
Answer: Trimming tool by GenoMax 142k
There are plenty. `bbduk.sh` from BBMap suite (https://jgi.doe.gov/data-and-tools/software-tools/bbtools/bb-tools-user-guide/bbduk-guide/ )…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation by bk11 ★ 2.5k
Please check out [in this link.][1] [1]: https://github.com/jokergoo/ComplexHeatmap/issues/349
Comment: Reconstruction of locus, order contigs by dthorbur ★ 2.0k
[Here](https://www.biostars.org/p/9544689/) is a forum post that may answer your question.
Comment: how to treat the replicates while performing WGCNA by andres.firrincieli 3.6k
> 1) I do not want to merge the MEs rather I asked about replicates, as > some replicates of same sample are showing different behavior for…
Comment: How to systematically check if a bam file is truncated by alanh ▴ 170
For more details about what `samtools quickcheck` actually checks for, add a few `-v`'s to the command line. $ samtools quickcheck -…
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