0
votes
0
replies
21
views
0
votes
1
reply
651
views
1
vote
1
reply
151
views
795
votes
167
replies
142k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
2
votes
6
replies
1.1k
views
0
votes
0
replies
40
views
6 hours ago by
rene.j.erhardt
▴
20
0
votes
6
replies
153
views
10 minutes ago by
Ruqaiya
•
0
1
vote
2
replies
125
views
1 hour ago by
Francesco
▴
10
0
votes
0
replies
71
views
8
votes
8
replies
584
views
0
votes
0
replies
77
views
0
votes
0
replies
72
views
18 hours ago by
Chris
▴
260
0
votes
1
reply
260
views
0
votes
2
replies
270
views
2
votes
3
replies
255
views
updated 19 hours ago by
Arup Ghosh
3.2k
•
written 1 day ago by
chaco001
▴
40
1
vote
3
replies
261
views
updated 12 hours ago by
Mensur Dlakic
★
27k
•
written 1 day ago by
O.rka
▴
710
0
votes
1
reply
161
views
updated 1 day ago by
Gordon Smyth
★
7.0k
•
written 1 day ago by
hagl
▴
10
0
votes
2
replies
194
views
1
vote
1
reply
145
views
updated 1 day ago by
Gordon Smyth
★
7.0k
•
written 1 day ago by
pairedttest
▴
10
3
votes
6
replies
1.9k
views
7 follow
0
votes
0
replies
356
views
4
votes
8
replies
530
views
4
votes
7
replies
588
views
7 follow
updated 1 day ago by
dsull
★
5.9k
•
written 5 days ago by
qudrat.nii
▴
10
19
votes
11
replies
14k
views
10 follow
2
votes
2
replies
259
views
3
votes
0
replies
151
views
updated 1 day ago by
Ram
43k
•
written 2 days ago by
Claire Watson
▴
60
0
votes
2
replies
224
views
updated 1 day ago by
Ram
43k
•
written 2 days ago by
The_PyPanda
▴
10
0
votes
0
replies
156
views
3
votes
3
replies
227
views
1
vote
0
replies
118
views
0
votes
0
replies
129
views
0
votes
0
replies
124
views
0
votes
0
replies
116
views
3
votes
3
replies
247
views
0
votes
0
replies
129
views
0
votes
0
replies
142
views
0
votes
1
reply
178
views
updated 2 days ago by
ATpoint
82k
•
written 2 days ago by
AaronJaime
•
0
0
votes
2
replies
240
views
0
votes
2
replies
273
views
updated 2 days ago by
Ram
43k
•
written 3 days ago by
Assa Yeroslaviz
★
1.8k
1
vote
2
replies
271
views
16 hours ago by
Francesco
▴
10
1
vote
6
replies
376
views
1 day ago by
starswillfade
▴
10
0
votes
0
replies
143
views
0
votes
0
replies
136
views
updated 2 days ago by
Ram
43k
•
written 2 days ago by
carlopecoraro2
★
2.5k
0
votes
0
replies
134
views
2 days ago by
Emily
▴
10
1
vote
0
replies
151
views
0
votes
0
replies
134
views
2 days ago by
synat.keam
▴
100
0
votes
0
replies
166
views
0
votes
1
reply
466
views
updated 2 days ago by
ginellegrenier
•
0
•
written 4 months ago by
Clayton
•
0
3
votes
4
replies
307
views
2 days ago by
QX
•
0
Recent Votes
Recent Locations •
All
Istanbul, Turkey, just now
India, 3 minutes ago
Russia, 4 minutes ago
Canada, 5 minutes ago
Czechia, 17 minutes ago
Perth, Australia, 22 minutes ago
Estonia, 25 minutes ago
Recent Awards •
All
Popular Question to
Raheleh
▴
260
Popular Question to
Aspire
▴
300
Popular Question to
rene.j.erhardt
▴
20
Popular Question to
yueli7
▴
250
Popular Question to
a_bis
▴
40
Popular Question to
anna
▴
20
Recent Replies
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
Also, there is no mention of adapter sequence so which adapter sequence should i use to remove it from some other reads?
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
Also, Do you think i can reproduce at least most part of the data from the paper just on my laptop? It has 4 logical processors (Intel(R) C…
Comment: NGS forensics: how to know if data is fabricated
by
Philipp Bayer
8.3k
While I think this is an interesting case, I've before found cleaned 'raw' data on SRA. It happens: bioinformaticians receive the raw data,…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
1. What does clipped Fastq mean? both forward and reverse reads in the same file?
2. Why would you remove 2000bp contigs? I feel it will gi…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
Well, I downloaded both the reads from-[LINK][1]. Thats all i did. Thats the only thing i need to do, right?
I'l try spades.
[1]: http…
Comment: How to assign cell types after integration in scRNA
by
Francesco
▴
10
Thanks for the fast reply.. however i had only partially understood the answer. Is correct saying that low-representation integration and b…
Answer: Can I run cellassign on samples independently if there is batch effect present?
by
Francesco
▴
10
Hi! Whenever you do make independent analysis or aggregate data and analyze them, most cell type assignment tools start from raw counts to …
Answer: ChIP-seq datasets: input samples omitted?
by
ATpoint
82k
In my hands (and from what I know based on many years here) inputs are almost exclusively used during peak calling to correct for loci-spec…
Comment: How to assign cell types after integration in scRNA
by
ATpoint
82k
No difference here. After all you typically want a label per cluster/group, so either subset to the control condition to do the assignment,…
Comment: Differential Expression using Isoseq-supplemented reference transcriptome
by
gaoanwei
•
0
I found the question and ASK the GPT4 turbo
Answer: Differential Expression using Isoseq-supplemented reference transcriptome
by
gaoanwei
•
0
Your approach seems reasonable and well-informed, though it's perhaps less customary in the field, which could be why you haven't found pap…
Answer: How many reads for WGS Sequencing?
by
Mensur Dlakic
★
27k
It takes 29 seconds to assemble this genome (20 CPUs) with the following statistics:
135 contigs, total 2821177 bp, min 200 bp, max …
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
530
IMO (and unfortunately) there needs to be an effort to develop these algorithms.
Comment: gvcf joint calling
by
Jeremy Leipzig
22k
the samples that are `./.` have no coverage (or not enough to call a genotype) and the `0/0` are homozygous reference
Traffic: 1934 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6