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<prev • 507 results • page 1 of 17 • next >
21
votes
2
answers
643
views
20 follow
2
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 21 days ago by sonpham • 550 • updated 1 day ago by Jennifer Pham • 230
11
votes
0
answers
633
views
9 follow
0
answers
Tool: [Crushing the bureaucracy in bioinformatics] Introducing Skymap-JupyterHub: accessing and utilizing reprocessed expression/ allelic read count profiles from >400,000 sequencing runs made simple
chip-seq snp rna-seq tool written 9 weeks ago by btsui • 270
2
votes
0
answers
210
views
0
answers
Tool: CLIP-seq database contains PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEAR-CLIP, irCLIP,sCLIP and uvCLIP
clip tool eclip hits-clip par-clip iclip written 4 weeks ago by lsp03yjh • 580
4
votes
0
answers
82
views
0
answers
Tool: Workflow for structural variants from long read sequencing data
nanopore structural variation snakemake pacbio tool written 7 days ago by WouterDeCoster ♦ 32k
1
vote
0
answers
1.8k
views
0
answers
Tool: TCGA & METABRIC Breast Cancer Subtype Survival Curve
gene tool rna-seq written 16 months ago by xushutan • 40
17
votes
1
answer
2.4k
views
1
answer
Tool: SeqKit: a cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
fasta fastq seqkit tool written 2.0 years ago by shenwei356 ♦ 4.1k • updated 11 days ago by bio_d • 0
27
votes
3
answers
1.3k
views
14 follow
3
answers
Tool: BioVinci: user-friendly software to make plotting easy - PCA, 3D scatter plot, venn diagram, you name it.
gene venn diagram pca tool rna-seq written 5 months ago by Jennifer Pham • 230
18
votes
16
answers
11k
views
14 follow
16
answers
Tool: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Binding Proteins From TCGA 32 Cancer Types and CLIP-seq data
tool cancer tcga rna-binding proteins mirna lncrna written 4.7 years ago by lsp03yjh • 580
15
votes
0
answers
323
views
20 follow
0
answers
Tool: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and labeling
bioconductor ggplot2 ggrepel tool volcano plot written 6 weeks ago by Kevin Blighe ♦ 30k
5
votes
1
answer
1.4k
views
1
answer
Tool: Giant Virus Finder - discover giant virus sequences in metagenomes
tools written 2.6 years ago by Csaba Kerepesi • 320 • updated 27 days ago by RamRS ♦ 18k
5
votes
0
answers
1.3k
views
0
answers
Tool: WINDOWS command line tool for sequence assembly
tools windows sequence assembly written 2.6 years ago by BioApps • 720 • updated 27 days ago by RamRS ♦ 18k
22
votes
0
answers
3.8k
views
0
answers
Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 2.2 years ago by t.kuilman • 690
5
votes
1
answer
242
views
5 follow
1
answer
Tool: SPLiT-Seq Demultiplexing a bash tool for extraction of barcoded single cells
tool rna-seq sequencing written 29 days ago by paulranum11 • 10 • updated 29 days ago by RamRS ♦ 18k
0
votes
0
answers
237
views
0
answers
Tool: UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands
tool database carbohydrate glycan lectins curated written 5 months ago by francois.bonnardel • 0
9
votes
0
answers
1.5k
views
0
answers
Tool: BioPandas - Working with molecular structures in pandas DataFrames
protein structure protein data bank pdb file tool written 2.9 years ago by se.raschka • 140 • updated 4 weeks ago by db4 • 0
7
votes
0
answers
1.2k
views
0
answers
Tool: metaViC: Virus metagenomics pipeline for unknown host or in absence of a host genome
assembly ngs metagenomics tool written 2.2 years ago by Sej Modha ♦ 3.7k • updated 4 weeks ago by fernandoavila3428 • 0
1
vote
0
answers
102
views
0
answers
Tool: tv(Table Viewer) for delimited file in terminal
viewer software tool written 5 weeks ago by codechenx • 20
11
votes
0
answers
774
views
7 follow
0
answers
Tool: Open Targets batch search, your list of human genes matched to our disease associations
bioinformatics disease drug tool open targets written 16 months ago by Denise - Open Targets • 4.7k
14
votes
0
answers
2.2k
views
9 follow
0
answers
Tool: Introducing FilterByTile: Remove Low-Quality Reads Without Adding Bias
quality filtering filterbytile bbmap tool illumina written 22 months ago by Brian Bushnell ♦ 16k • updated 6 weeks ago by AllisonAnne • 0
1
vote
0
answers
176
views
0
answers
Tool: pytfmpval: Efficient, accurate p-value computation for position weight matrices
pwm tool p-value python chip-seq motifs written 7 weeks ago by jared.andrews07 • 1.3k
0
votes
0
answers
151
views
0
answers
Tool: Interrogate & visualise transcriptomics data, at scale, without support of a bioinformatician
transcriptomics expression data tool written 7 weeks ago by craig.smith • 0
23
votes
0
answers
4.5k
views
0
answers
Tool: ggtree: phylogenetic tree visualization and annotation
phylogeny ggtree visualization tool written 2.3 years ago by Guangchuang Yu • 2.0k • updated 8 weeks ago by abdul.suboor123 • 0
4
votes
0
answers
735
views
6 follow
0
answers
Tool: KeggExp: a web server for visualizing KEGG pathways maps when analyzing expression profile data
expression profile data pathway visualization tool written 4 months ago by liux.bio • 280
1
vote
0
answers
164
views
0
answers
Tool: Interactive global map of human genome assemblies that use long read sequencing (PacBio) data.
wgs assembly tool human pacbio written 9 weeks ago by tjduncan • 190
3
votes
0
answers
224
views
0
answers
Tool: Genotify: Fast, lightweight gene lookup and summarization
gene annotation data mining tool data integration written 9 weeks ago by jared.andrews07 • 1.3k
3
votes
0
answers
181
views
0
answers
Tool: shinyChromosome: an R/Shiny application for interactive creation of non-circular plots of whole genome
tool genome shiny plot R app written 10 weeks ago by Andrewoods • 90
4
votes
0
answers
269
views
6 follow
0
answers
Tool: repaq: compress Illumina FASTQ to be as small as 1/4 of the gzip format.
compress repaq fastq tool written 10 weeks ago by chen • 1.7k
8
votes
0
answers
238
views
0
answers
Tool: Varstation - High precision on genetic analysis
next-gen tool germline acmg exome pipelines written 10 weeks ago by karla.ferraz • 30
13
votes
1
answer
2.5k
views
1
answer
Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.3 years ago by Guangchuang Yu • 2.0k
17
votes
0
answers
9.3k
views
16 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 22 months ago by Abdul Rafay Khan • 880 • updated 11 weeks ago by kate.j.mckenzie • 0
<prev • 507 results • page 1 of 17 • next >
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