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<prev • 525 results • page 1 of 18 • next >
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Tool: Annotation of noncoding variants and transcription factor motifs
noncoing tf motifs tool regulatory variants written 6 weeks ago by husensofteng • 20
6
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877
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Tool: RNA Motifs and CLIP-seq database from PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEAR-CLIP, irCLIP,sCLIP, hiCLIP and uvCLIP
clip tool eclip hits-clip par-clip iclip written 5 months ago by lsp03yjh • 740
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204
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7 follow
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Tool: PCAtools: everything Principal Components Analysis
R bioconductor pca eigenvector tool written 12 days ago by Kevin Blighe ♦ 37k • updated 12 days ago by prasundutta87 • 310
3
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1
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276
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1
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Tool: open-cravat: variant annotation tool
tool open-cravat written 9 weeks ago by slcrick • 90
15
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1.3k
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11 follow
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Tool: pathfindR - Pathway Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 11 months ago by egeulgen • 660
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1.1k
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Tool: MUTAFRAME - a web app for mutation effect prediction & visualization
proteomics visualization mutation tool snp written 22 months ago by Ibrahim Tanyalcin • 920
15
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2
answers
811
views
2
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Tool: FlexiDot: highly customizable, ambiguity-aware dotplots
dotplot visualization tool sequence analysis written 9 months ago by toheitka • 230
4
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1.4k
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Tool: MAGERI: a software tool for calling rare variants and detecting circulating tumor DNA from UMI-tagged high-throughput sequencing data
rare variant umi resequencing ctdna tool written 21 months ago by mikhail.shugay ♦ 3.3k • updated 21 days ago by alons • 270
24
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1.5k
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30 follow
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Tool: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and labeling
bioconductor ggplot2 ggrepel tool volcano plot written 5 months ago by Kevin Blighe ♦ 37k
6
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1
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302
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1
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Tool: Graphical User Interface for creating an automated RNA-Sequencing Pipeline via Kallisto and DESeq2
deseq2 kallisto rna-seq tool written 5 weeks ago by Anthony.Knox • 50 • updated 5 weeks ago by Charles Warden ♦ 6.1k
5
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1
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841
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5 follow
1
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Tool: SPLiT-Seq Demultiplexing a bash tool for extraction of barcoded single cells
tool rna-seq sequencing written 5 months ago by paulranum11 • 30 • updated 6 weeks ago by rainwashautumn • 0
9
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5.4k
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Tool: Pyteomics - An Open-Source Python Framework For Mass Spectrometry (Ms) Based Proteomics
proteomics python sequence tool mass-spec written 5.9 years ago by lev.levitsky • 90
8
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1.6k
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Tool: Digital Expression Explorer
geo tool rna-seq written 3.3 years ago by mark.ziemann • 1.1k
29
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2
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2.4k
views
16 follow
2
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Tool: BioVinci: user-friendly software to make plotting easy - PCA, 3D scatter plot, venn diagram, you name it.
gene venn diagram pca tool rna-seq written 9 months ago by Jennifer Pham • 260
3
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0
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265
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Tool: Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Interactions from RNA Interactome Sequencing Data
lncrna interactions rna interactome starbase tool written 11 weeks ago by lsp03yjh • 740
13
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301
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14 follow
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Tool: iStack: an R solution for plotting stacked bars using custom icons
R tool written 9 weeks ago by brettgao2018 • 160
0
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188
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Tool: cnv_facets: somatic Copy Number Variant calling using the facets package
tool cancer somatic command line facets cnv written 9 weeks ago by dariober ♦ 9.9k
19
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1
answer
836
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5 follow
1
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Tool: elPrep 4.0.0, a high-performance drop-in replacement tool for GATK4/Picard/SAMtools for processing SAM/BAM files
bam sam sort markduplicates bqsr tool written 3 months ago by Charlotte.Herzeel • 130
6
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2.8k
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Tool: Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
tool cancer rna-seq clip-seq rbp lncrna written 4.1 years ago by lsp03yjh • 740
11
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2
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3.7k
views
2
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Tool: RNA Modification Database and Epitranscriptome Sequencing Data
tool epitranscriptome rna modification rbp m6a lncrna written 3.3 years ago by lsp03yjh • 740 • updated 10 weeks ago by africainterpol101 • 0
5
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0
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255
views
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Tool: New ultraperformant version of SICER/epic: epic2
chip-seq tool written 11 weeks ago by endrebak852 • 90
0
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174
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Tool: Open Targets Genetics: variant-centric resource for drug target identification and prioritisation
gwas tool snp phenotype gene drug written 12 weeks ago by Denise - Open Targets • 4.7k
22
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2
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1.1k
views
21 follow
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 4 months ago by sonpham • 550
0
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217
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Tool: DASHR 2.0: integrated database of human small non-coding RNA genes and mature products
noncoding rna small rna tool rna-seq ncrna written 3 months ago by pkouxa • 0 • updated 3 months ago by WouterDeCoster ♦ 36k
3
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208
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Tool: Analysis of codon usage in R/Bioconductor using coRdon
R tool codon usage written 3 months ago by anamaria • 30
0
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179
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Tool: CAGm: a repository of germline microsatellite variations in the 1000 genomes project
microsatellites tool 1000 genomes project written 3 months ago by nkinney06 • 30
0
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192
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Tool: VisualMSI: detect and visualize microsatellite instability(MSI) from NGS data
opengene visualization detection msi tool written 3 months ago by chen • 1.8k
2
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239
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Tool: Web-based Interactive Omics VisualizatioN (WIlsON), a nice tool for individual scientists as well as bioinfo core units
next-gen tool chip-seq R rna-seq gene written 3 months ago by mario.looso • 30
28
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0
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7.0k
views
16 follow
0
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Tool: Snakemake--Python-Based Workflow Management
python workflow tool written 5.2 years ago by Sean Davis ♦ 25k • updated 3 months ago by carlopecoraro2 • 840
2
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240
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Tool: DocMind Analyst - A New NGS Data Analysis Software Suite With A Graphical User Interface Specifically Designed For Researchers Without Bioinformatics Background
phylogeny assembly 16s rrna analysis gui tool written 3 months ago by DMA • 20
<prev • 525 results • page 1 of 18 • next >
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