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<prev • 548 results • page 1 of 19 • next >
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Tool: MUTAFRAME - a web app for mutation effect prediction & visualization
proteomics visualization mutation tool snp written 2.2 years ago by Ibrahim Tanyalcin • 950
3
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149
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Tool: Single cell rnaseq analysis pipeline available
chromium10x scrna seurat scrnaseq tool written 11 days ago by Mamta • 440
8
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1
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653
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5 follow
1
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Tool: New ultraperformant version of SICER/epic: epic2
chip-seq tool written 6 months ago by endrebak852 • 100 • updated 13 days ago by Coralie • 0
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76
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Tool: Porter 5: fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes
protein secondary structure machine learning tool written 20 days ago by Mirko • 10
21
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2
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1.1k
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5 follow
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Tool: elPrep 4.0.0, a high-performance drop-in replacement tool for GATK4/Picard/SAMtools for processing SAM/BAM files
bam sam sort markduplicates bqsr tool written 8 months ago by Charlotte.Herzeel • 140
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3.2k
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34 follow
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Tool: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and labeling
bioconductor ggplot2 ggrepel tool volcano plot written 9 months ago by Kevin Blighe ♦ 44k
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3.2k
views
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Tool: GenVisR: Genomic Visualizations in R
genomic visualization genvisr rna-seq tool written 3.0 years ago by Obi Griffith ♦ 17k • updated 23 days ago by abio • 0
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114
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Tool: Circle-Map: Sensitive detection of circular DNA at single-nucleotide resolution using guided realignment of partially aligned reads
ecdna circdna tool eccdna written 24 days ago by IP • 550
6
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1.4k
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Tool: RNA Motifs and CLIP database from PAR-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEAR-CLIP, irCLIP,sCLIP, hiCLIP and uvCLIP
clip tool eclip hits-clip par-clip iclip written 9 months ago by lsp03yjh • 750
2
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256
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Tool: Using NGS replicates for variant calling
variant calling ngs sequencing tool somatic mutation written 3 months ago by swkim • 20 • updated 29 days ago by stephannie.baker8 • 0
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2
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3.9k
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2
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Tool: RNA Modification Database and Epitranscriptome Sequencing Data
tool epitranscriptome m5c m1a rna modification m6a written 3.7 years ago by lsp03yjh • 750
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1
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287
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1
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Tool: Shell script to automate trimmomatic for multiple samples
trimmomatic tool shell bash written 6 weeks ago by Vijay Lakhujani ♦ 4.2k
0
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132
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Tool: Mr_Demuxy: A Demultixper for Combinatorially Multiplexed Next Generation Reads
metagenomics tool dual-index demultiplexing written 5 weeks ago by Cornel • 30
0
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150
views
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Tool: Statistical Plotting GUI app - Minimal/no coding required by user
gui heatmap plotting julia tool no-coding written 6 weeks ago by srgk26ster • 10
13
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1
answer
416
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1
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Tool: CBioInfCpp.h as a C++ lib containing some functions for bioinformatics
c++ tool written 10 weeks ago by chernouhov • 10
0
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100
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Tool: MiStImm: an agent-based simulation tool to study the self-nonself discrimination of the adaptive immune response
immune system simulation tool written 7 weeks ago by Csaba Kerepesi • 330
3
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274
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Tool: SIMON says: Powerful, flexible, open-source and easy to use automated machine learning knowledge discovery platform
systems biology automl machine learning big data tool written 7 weeks ago by LogIN • 20
1
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158
views
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Tool: AllMine, a flexible pipeline for allele mining
wgs pipeline snp rna-seq tool written 8 weeks ago by thomasbersez • 20
0
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191
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Tool: TAMA: long read RNA sequencing (Iso-Seq and Nanopore) processing tools
isoseq tool tama pacbio iso-seq nanopore written 8 weeks ago by genomerik • 30
2
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220
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Tool: chromoMap- R package for Interactive visualization and Annotation of chromosomes or regions of any living organism.
genome R visualization tool annotation written 9 weeks ago by lakshayanand15 • 20
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1
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1.6k
views
5 follow
1
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Tool: Arriba: Fast and accurate gene fusion detection from RNA-Seq data
variant calling tool cancer fusion rna-seq gene written 16 months ago by uhrigs • 80
0
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150
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Tool: linkageMapper, for viewing loci sequence differences across strains of one organism.
assembly sequence tool snp written 10 weeks ago by gabriel_scf • 0
0
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195
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Tool: Multiple Sequence Alignment in the Browser with custom monospace fonts
sequence alignment msa tool written 10 weeks ago by Ibrahim Tanyalcin • 950
1
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211
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Tool: Cellosaurus STR similarity search tool
cell line str profile tool written 10 weeks ago by Amos Bairoch • 20
3
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186
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Tool: Hera-T: an efficient and accurate algorithm for single-cell transcript quantification
scrna-seq single-cell tool rna-seq written 11 weeks ago by Jennifer Pham • 290
4
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0
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446
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6 follow
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Tool: Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Interactions from RNA Interactome Sequencing Data
lncrna mirna rna interactome tool interactome written 6 months ago by lsp03yjh • 750
2
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310
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Tool: Good medical & biological literature search engine
publication literature tool literatue search written 3 months ago by Matthew • 20
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216
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Tool: RUPEE protein structure search
protein structure protein structure search tool written 3 months ago by rayoub • 110
64
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1
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9.9k
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41 follow
1
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Tool: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remove duplicates.
clumpify pigz tool compression bbmap storage written 2.6 years ago by Brian Bushnell ♦ 16k • updated 3 months ago by snishtala03 • 10
0
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231
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Tool: VCF to FHIR Converter
tool sequencing written 3 months ago by bdolin • 90
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