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News: Getting started with R
R
updated 11 months ago by 43k • written 5.1 years ago by ★ 2.5k
0
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1
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550
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News: Courses in January - still a few seats available
R-Shiny Genomics Unix R
updated 15 months ago by 43k • written 16 months ago by ★ 2.5k
0
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1
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1.4k
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News: Webinar on Leukocyte immunobiology by Dr. Mario Deng, Professor of Medicine, UCLA on 9 Aug 2017, 8am PST
UCLA transcriptome-analysis RNA-Seq Strand-NGS
updated 11 months ago by 43k • written 6.8 years ago by ▴ 70
1
vote
1
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3.2k
views
News: Course: STATISTICS FOR BIOLOGISTS USING R. 18-22 September (Berlin)
statistics R
updated 12 months ago by 43k • written 7.3 years ago by ★ 2.5k
4
votes
1
reply
2.2k
views
News: 2014 ISCB Wikipedia Article Competition announcement
ISCB competition Wikipedia
written 9.8 years ago by ★ 2.0k
1
vote
1
reply
211
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 8 weeks ago by 43k • written 8 weeks ago by • 0
6
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1
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2.9k
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News: "Oxford University Press to Publish NAR Genomics and Bioinformatics"
journal
updated 11 months ago by 43k • written 5.0 years ago by 161k
0
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1
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2.4k
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News: Hands-on training in Bioinformatics and Biomedical Data Science
NGS training
updated 11 months ago by 43k • written 5.6 years ago by ▴ 10
1
vote
1
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2.6k
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News: Benefits of DNA Testing - Xcode Life sciences provides preventive healthcare solution
personal-genomics genetic-testing
updated 16 months ago by 43k • written 9.0 years ago by • 0
1
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1
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1.7k
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News: 2nd Berlin Summer School in NGS Data Analysis 2018
DNA-Seq Workshop NGS RNA-Seq
updated 11 months ago by 43k • written 6.1 years ago by 11k
0
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1
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850
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News: FINAL CALL: Online Course - A Practical Introduction to NGS Data Analysis - October 23-25, 2023
DNA-seq Workshop RNA-seq
7 months ago by David Langenberger 11k
2
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1
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470
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News: Successful NCBI NIAID Codeathon on VCF Files in SARS-CoV-2 Genomics
NCBI Codeathon
updated 7 months ago by 10k • written 7 months ago by ▴ 410
1
vote
1
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1.3k
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News: New International MScProgram: Data Science and Information Technologies (DSIT) from the University of Athens [New Application Deadline 6 Aug 18]
studies data-science
updated 11 months ago by 43k • written 5.8 years ago by ★ 1.3k
3
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1
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6.8k
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News: LinkedOmics - a web portal for TCGA/CPTAC data
TCGA cptac cancer
updated 11 months ago by 43k • written 6.4 years ago by 142k
4
votes
1
reply
2.3k
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News: ENCODE Users' Meeting
encode ucsc conference functional-genomics ensembl
updated 21 months ago by 43k • written 8.9 years ago by 23k
0
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1
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624
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News: API for accessing SARS-COV-2 genomic data
rpackage sars genomics api covid
updated 23 months ago by 142k • written 23 months ago by • 0
0
votes
1
reply
1.6k
views
News: Course: RADseq data analysis in Berlin (4-8/12/17). LAST CALL
STACKs RADseq
updated 11 months ago by 43k • written 6.5 years ago by ★ 2.5k
0
votes
1
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195
views
News: Online NGS Training Program
next-gen-sequencing RNA-Seq ChIP-Seq
updated 11 months ago by 43k • written 4.8 years ago by • 0
5
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1
reply
1.1k
views
News: New biostar-tools metaport for FreeBSD
freebsd software
2.6 years ago by bacon4000 ▴ 80
2
votes
1
reply
880
views
News: Gene set enrichment and pathway analysis in HT data
next-gen-sequencing RNA-Seq
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
1
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1
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1.7k
views
News: Igb Service Interruption - Backup Site Address
genome-browser RNA-seq
updated 14 months ago by 43k • written 10.5 years ago by ★ 2.4k
1
vote
1
reply
2.4k
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News: Bioinformatics for Cancer Genomics Workshop
Cancer-Genomics
updated 21 months ago by 43k • written 8.3 years ago by ▴ 30
0
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1
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1.0k
views
News: Help GIAB manually curate benchmark SVs!
giab
updated 11 months ago by 43k • written 6.0 years ago by 161k
1
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1
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1.2k
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News: Codondex $100,000 Bio Hunt Awards
RNA-Seq sequencing gene
updated 13 months ago by 43k • written 7.5 years ago by • 0
0
votes
1
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792
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News: Advanced R Programming Course
R
updated 11 months ago by 43k • written 6.0 years ago by ★ 2.5k
11
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1
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2.9k
views
News: NGS Data Analysis Workshop for Beginners in Munich (full)
RNA-Seq training NGS workshop
updated 22 months ago by 43k • written 7.8 years ago by 11k
0
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1
reply
1.1k
views
News: Google Summer of Code 2020 announced for mentor organisations
internship GSoC
updated 11 months ago by 43k • written 4.4 years ago by 23k
5
votes
1
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2.6k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
programming course R
updated 14 months ago by 43k • written 9.5 years ago by ★ 1.7k
0
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1
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1.2k
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News: FINAL CALL - Workshop - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (November 8-10, 2023 in Berlin)
workshop RNA-Seq scRNA-Seq single-cell
6 months ago by David Langenberger 11k
5
votes
1
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2.3k
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News: New version of the GATB library
minia next-gen gatb dsk
updated 2.3 years ago by 43k • written 9.3 years ago by ▴ 730
0
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1
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1.1k
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News: New Alexa skill provides voice-based access to Protein Data Bank data
protein-structure pdb
updated 11 months ago by 43k • written 6.5 years ago by • 0
8
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1
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2.7k
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News: An Interesting Article On Bioinformatics Education With Some Press For Biostar
meta biostars
updated 14 months ago by 43k • written 10.8 years ago by 11k
2
votes
1
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2.0k
views
News: New NPG journal "Human Genome Variation"
journal SNP variation
updated 14 months ago by 43k • written 9.5 years ago by 161k
0
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1
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1.3k
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News: 5th Berlin Summer School in NGS Data Analysis 2021 (October 4-8)
DNA-Seq Workshop RNA-Seq NGS
updated 15 months ago by 43k • written 3.2 years ago by 11k
7
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1
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3.1k
views
News: A Multi-Split Mapping Algorithm For Circular Rna, Splicing, Trans-Splicing, And Fusion Detection
ngs mapping
updated 14 months ago by 43k • written 10.2 years ago by 11k
0
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1
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1.6k
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News: :: FINALL CALL :: RNA-Seq Data Analysis Workshop for Beginners - Registraion to be closed
NGS RNA-Seq Training
updated 11 months ago by 43k • written 4.4 years ago by 11k
0
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1
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1.5k
views
News: How Are Virtual Clinical Trials Changing the Clinical Trial Landscape? Learn More October 21, 2016
clinical-trials
updated 13 months ago by 43k • written 7.6 years ago by ▴ 60
3
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1
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1.2k
views
News: UniProt: Change of FT and CC section in UniProtKB text format
uniprot protein
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
0
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1
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973
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News: ::LAST CALL:: RNA-Seq Data Analysis Workshop, February 28 - March 3, 2022 in Berlin
RNAseq Transcriptomics RNA
2.2 years ago by David Langenberger 11k
0
votes
1
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964
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News: FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS RNA-Seq Workshop
3 months ago by David Langenberger 11k
0
votes
1
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1.1k
views
News: :: LAST CALL :: Online Course - A Practical Introduction to NGS Data Analysis (March 1 - 3, 2021)
DNA-Seq Workshop RNA-Seq
updated 15 months ago by 43k • written 3.3 years ago by 11k
2
votes
1
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2.1k
views
News: Igb 8 Webinar Starts At 1 Pm Eastern
visualization genome-browser bam rna-seq
updated 14 months ago by 43k • written 10.5 years ago by ★ 2.4k
1
vote
1
reply
676
views
News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
13 months ago by jared.andrews07 ★ 16k
16
votes
1
reply
5.0k
views
News: Samtools/htslib/bcftools 1-3 released
htslib samtools bcftools
updated 13 months ago by 43k • written 8.4 years ago by 104k
1
vote
1
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728
views
News: Online Course - A Practical Introduction to NGS Data Analysis (September 15-17, 2021)
workshop DNAseq RNAseq
updated 2.8 years ago by ▴ 580 • written 2.8 years ago by 11k
0
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1
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3.2k
views
News: Call For Book Chapters: Big Data Analytics in Genomics (Springer USA)
Book-Chapter CFP
updated 20 months ago by 43k • written 8.5 years ago by ▴ 10
0
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1
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2.4k
views
News: Nature Index: Novogene is teaming up with laboratories worldwide for life sciences and human health research
NGS Nature Sequencing
updated 16 months ago by 43k • written 2.1 years ago by ▴ 420
3
votes
1
reply
2.3k
views
News: NCBI : New API Keys for the E-utilities
pubmed eutils ncbi api
updated 11 months ago by 43k • written 6.5 years ago by 161k
1
vote
1
reply
1.9k
views
News: 'Spring School 2013 - Epigenetics Of Civilization Diseases', May 27Th - 31St 2013, In Leipzig, Germany
epigenetics
updated 14 months ago by 43k • written 11.4 years ago by 11k
3
votes
1
reply
2.5k
views
News: Variathon V0.1 - 2013 - Comparing Existing Or New Pipelines For Variant Calling In Terms Of Accuracy And Efficiency
ngs conference
updated 14 months ago by 43k • written 11.2 years ago by 161k
1,000 results • Page 7 of 20
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Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
Answer: Association study using SNP data
.lgen file has 3+ different alleles
Force PLINK2 to neglect chrX as the sex chromosome
Answer: Force PLINK2 to neglect chrX as the sex chromosome
LD-prune variants while maintaining a list of SNPs
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Comment: Gene Specific coverage from WGS data by 1769mkc ★ 1.2k
"Also if is there any other quick way to find gene specific coverage" can you give some example so that its bit more clear what do you mean…
Answer: Tissue-specific DEG analysis with DEseq2 by ATpoint 82k
I assume that all data are from the same experiment, without batch effects and can thus be quantitiatively compared: Many ways to do thi…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio by snajafy • 0
I am facing the same problem and I don't know how to solve the problem,....
Comment: install.packages("imudata") by zx8754 11k
[How should I deal with "package 'xxx' is not available (for R version x.y.z)" warning?](https://stackoverflow.com/q/25721884/680068)
Answer: install.packages("imudata") by ATpoint 82k
Welcome to this community. Please learn the most important lesson right away which is reading answers and learning from it. Users gave you …
Comment: install.packages("imudata") by marco.barr ▴ 90
You can install from github directly. Many R packages are not present in the CRAN repository or in Bioconductor( from Biocmanager). Also re…
Comment: install package by snajafy • 0
Hi, Thanks for your answer, I do it, but I get this error: ERROR: compilation failed for package 'gmwm' removing 'C:/Users/najafi/AppData/…
Comment: Quetion regarding WGCNA by andres.firrincieli 3.6k
There is something wrong with your data but without any context I can't really answer to your question. I would like to see a PCA plot of …
Comment: error to run rnammer by antonio.spl • 0
please could you tell me what was the solution, I am having the same problem, I only get empty files.
Comment: install package by snajafy • 0
Hi, Thanks for your answer, I do it, but I get this error: ERROR: compilation failed for package 'gmwm' * removing 'C:/Users/najafi/AppData…
Answer: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t by swbarnes2 14k
Any chance the numerical columns were imported as factors?
Comment: ERROR When Using Ensembl Plants Biomart Wget API by Dora ▴ 10
Thank you very much, that works perfectly :) ! Maybe someone needs to use a plant dataset as an example (instead of human dataset ) in the …
Comment: Truncated Bam Error by guanghao • 0
I also have this problem, but it doesn't work even I remove the Xms32g. The result bam is still malformed.
Answer: DMRcate ranges liftover hg19 to hg38 by aaron.stevens • 0
Hey, I believe they are mapped to hg19 and this is potentially a bigger problem than people realise, I nearly made this mistake and I would…
Comment: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB by brandon • 0
This worked beautifully using 'requests.get()' in python, thank you so much!
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