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0
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2
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Comment: Comment: Problem when generating hg38 genome indexes using STAR
3.9 years ago by Sara ▴ 280
0
votes
2
replies
2.1k
views
Comment: Comment: Problem when generating hg38 genome indexes using STAR
3.9 years ago by Sara ▴ 280
0
votes
6
replies
2.1k
views
Problem when generating hg38 genome indexes using STAR
STAR
updated 3.9 years ago by 90k • written 3.9 years ago by ▴ 280
0
votes
1
reply
3.3k
views
Comment: Comment: error when indexing transcroptome using salmon
3.9 years ago by Sara ▴ 280
0
votes
1
reply
3.3k
views
Comment: Comment: error when indexing transcroptome using salmon
3.9 years ago by Sara ▴ 280
0
votes
1
reply
3.3k
views
Comment: Comment: error when indexing transcroptome using salmon
3.9 years ago by Sara ▴ 280
3
votes
8
replies
3.3k
views
error when indexing transcroptome using salmon
Transcriptome salmon
updated 3.9 years ago by 7.2k • written 3.9 years ago by ▴ 280
0
votes
0
replies
628
views
detect the alternative contigs from the RNAseq data
alternative contigs
4.0 years ago by Sara ▴ 280
0
votes
1
reply
1.8k
views
Comment: Comment: obtaining unique identifier for a sample from fastq files
4.1 years ago by Sara ▴ 280
0
votes
4
replies
1.8k
views
obtaining unique identifier for a sample from fastq files
fastq
4.1 years ago by Sara ▴ 280
1
vote
1
reply
839
views
extract specific information from fastq and sam files
sequencing
updated 4.1 years ago by 154k • written 4.1 years ago by ▴ 280
4
votes
2
replies
1.5k
views
DNA to peptide translation and adding to csv file
translation
updated 4.1 years ago by 166k • written 4.1 years ago by ▴ 280
3
votes
3
replies
1.1k
views
best tool for the pipeline wrapper
pipeline
updated 4.2 years ago by 103k • written 4.2 years ago by ▴ 280
0
votes
0
replies
4.4k
views
Comment: Comment: collapsing pacbio reads into a single sequence
4.3 years ago by Sara ▴ 280
0
votes
1
reply
4.4k
views
Comment: Comment: collapsing pacbio reads into a single sequence
4.3 years ago by Sara ▴ 280
2
votes
5
replies
4.4k
views
collapsing pacbio reads into a single sequence
pacbio
4.3 years ago by Sara ▴ 280
2
votes
2
replies
1.2k
views
Available annotation file for the PacBio Iso-seq data
sequencing
updated 4.4 years ago by 154k • written 5.8 years ago by ▴ 280
3
votes
3
replies
1.9k
views
quick way of contamination identification from fastq file
alignment
updated 4.4 years ago by ★ 1.4k • written 4.4 years ago by ▴ 280
0
votes
1
reply
1.9k
views
Comment: Comment: problem with SNPs and Indels detectiong useng WGS data
4.6 years ago by Sara ▴ 280
1
vote
4
replies
1.9k
views
problem with SNPs and Indels detectiong useng WGS data
WGS
updated 4.6 years ago by 45k • written 4.6 years ago by ▴ 280
0
votes
0
replies
908
views
Comment: Comment: low alignment rate of methyl-seq data
4.7 years ago by Sara ▴ 280
1
vote
2
replies
908
views
low alignment rate of methyl-seq data
alignment
4.7 years ago by Sara ▴ 280
0
votes
0
replies
710
views
methylseq data analysis using bismark and low alignment rate
next-gen
4.8 years ago by Sara ▴ 280
4
votes
6
replies
3.0k
views
UMI and the reason of high duplicate rate
rna-seq
updated 5.1 years ago by 15k • written 5.1 years ago by ▴ 280
0
votes
2
replies
3.0k
views
Comment: A: UMI and the reason of high duplicate rate
5.1 years ago by Sara ▴ 280
1
vote
1
reply
1.1k
views
compare expression for 1 gene between more than 2 samples
RNA-Seq
updated 5.1 years ago by • 0 • written 5.1 years ago by ▴ 280
5
votes
2
replies
7.3k
views
CIBERSORT input file format
RNA-Seq CIBERSORT
updated 5.2 years ago by ▴ 30 • written 5.6 years ago by ▴ 280
2
votes
2
replies
1.5k
views
correct order for pathway analysis
gene
5.2 years ago by Sara ▴ 280
1
vote
1
reply
1.8k
views
a lot of missing variants when using DRAGEN for variant calling
next-gen
5.2 years ago by Sara ▴ 280
0
votes
1
reply
2.2k
views
comparing 2 VCF files
SNP
5.2 years ago by Sara ▴ 280
0
votes
2
replies
1.1k
views
building container in singularity
software error
5.3 years ago by Sara ▴ 280
3
votes
4
replies
3.5k
views
VCF evaluation using RTG.jar vcfeval
SNP
updated 5.3 years ago by ★ 1.7k • written 5.3 years ago by ▴ 280
1
vote
2
replies
1.2k
views
missing file in rtg-tools
SNP
5.3 years ago by Sara ▴ 280
0
votes
2
replies
2.5k
views
difference between DRAGEN and GATK
genome
5.3 years ago by Sara ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: how can I find the download link for a famous dataset
5.4 years ago by Sara ▴ 280
0
votes
1
reply
1.5k
views
Comment: C: how can I find the download link for a famous dataset
5.4 years ago by Sara ▴ 280
1
vote
4
replies
1.5k
views
how can I find the download link for a famous dataset
sequencing
5.4 years ago by Sara ▴ 280
0
votes
2
replies
1.1k
views
identifying the command for creating VCF file
SNP
updated 5.4 years ago by ★ 3.3k • written 5.4 years ago by ▴ 280
1
vote
0
replies
688
views
evaluate the quality of VCF files for CNVs
sequencing genome
updated 5.4 years ago by 166k • written 5.4 years ago by ▴ 280
0
votes
3
replies
2.6k
views
read count normalization for spike
RNA-Seq
updated 5.5 years ago by 20 • written 8.7 years ago by ▴ 280
1
vote
1
reply
1.8k
views
correct order of cut off and normalization in RNAseq data
RNA-Seq
updated 5.5 years ago by 90k • written 5.5 years ago by ▴ 280
0
votes
2
replies
784
views
legal issues about running the analysis on the cloud
next-gen
updated 5.7 years ago by 105k • written 5.7 years ago by ▴ 280
0
votes
2
replies
1.5k
views
tool for the new protocol of WES for CNV detection
next-gen
updated 5.7 years ago by ★ 3.0k • written 5.7 years ago by ▴ 280
3
votes
2
replies
1.2k
views
uploading the files to the cloud
RNA-Seq
updated 5.7 years ago by 35k • written 5.7 years ago by ▴ 280
0
votes
5
replies
1.3k
views
location of integrated vector in the genome in CRISPR experiment
genome
updated 5.7 years ago by 16k • written 5.7 years ago by ▴ 280
0
votes
0
replies
1.3k
views
Comment: C: location of integrated vector in the genome in CRISPR experiment
5.7 years ago by Sara ▴ 280
0
votes
0
replies
1.3k
views
Comment: C: location of integrated vector in the genome in CRISPR experiment
5.7 years ago by Sara ▴ 280
0
votes
1
reply
752
views
INDELs frequency at the on-target site in CRISPR experiment
genome
5.7 years ago by Sara ▴ 280
3
votes
3
replies
3.1k
views
create consensus sequence from bam file
alignment
5.8 years ago by Sara ▴ 280
0
votes
1
reply
3.1k
views
Comment: A: create consensus sequence from bam file
5.8 years ago by Sara ▴ 280
147 results • Page 2 of 3
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