updated just now by
Gordon Smyth
★
7.1k
•
written 1 day ago by
SHN
▴
40
2
votes
3
replies
187
views
3
votes
2
replies
80
views
1 hour ago by
lorena9132
▴
10
0
votes
1
reply
82
views
updated 1 hour ago by
Mathew
▴
20
•
written 9 hours ago by
drajangirija
•
0
0
votes
0
replies
31
views
2
votes
3
replies
707
views
updated 7 hours ago by
vjanve
•
0
•
written 7 months ago by
mateomejias
•
0
795
votes
167
replies
142k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
2
replies
119
views
0
votes
4
replies
201
views
updated 11 hours ago by
Mensur Dlakic
★
27k
•
written 19 hours ago by
Ruqaiya
•
0
0
votes
0
replies
52
views
0
votes
0
replies
55
views
0
votes
1
reply
98
views
1
vote
1
reply
995
views
updated 22 hours ago by
lcordeiro
▴
40
•
written 14 months ago by
Zhenyu Zhang
★
1.2k
0
votes
1
reply
204
views
updated 23 hours ago by
chrchang523
10k
•
written 4 days ago by
8armed
•
0
0
votes
5
replies
255
views
updated 23 hours ago by
chrchang523
10k
•
written 1 day ago by
curious
▴
750
0
votes
0
replies
81
views
updated 17 hours ago by
Ram
43k
•
written 1 day ago by
deepak180001
•
0
0
votes
1
reply
127
views
0
votes
1
reply
124
views
0
votes
1
reply
120
views
0
votes
6
replies
316
views
0
votes
1
reply
118
views
updated 1 day ago by
swbarnes2
14k
•
written 1 day ago by
kalavattam
▴
190
0
votes
1
reply
111
views
0
votes
0
replies
86
views
0
votes
0
replies
83
views
1 day ago by
Javier
•
0
0
votes
1
reply
137
views
updated 16 hours ago by
Thanujay S
•
0
•
written 1 day ago by
yahn
•
0
0
votes
0
replies
80
views
0
votes
0
replies
81
views
0
votes
2
replies
142
views
updated 1 day ago by
GenoMax
142k
•
written 1 day ago by
ahmad.sajad4541
•
0
0
votes
0
replies
77
views
1 day ago by
marco.barr
▴
90
0
votes
0
replies
159
views
2
votes
2
replies
165
views
updated 4 hours ago by
Ram
43k
•
written 1 day ago by
carolofharvest
▴
30
9
votes
9
replies
494
views
updated 4 hours ago by
Ram
43k
•
written 5 days ago by
carolofharvest
▴
30
0
votes
2
replies
172
views
0
votes
0
replies
93
views
1
vote
1
reply
122
views
updated 4 hours ago by
Ram
43k
•
written 1 day ago by
adi.gershon1
•
0
3
votes
5
replies
215
views
0
votes
5
replies
277
views
6 follow
updated 1 day ago by
b.contreras.moreira
▴
180
•
written 2 days ago by
JH
•
0
1
vote
3
replies
230
views
0
votes
0
replies
94
views
1 day ago by
Amos Bairoch
▴
120
2
votes
3
replies
230
views
0
votes
0
replies
112
views
0
votes
2
replies
696
views
updated 1 day ago by
clairechung112
•
0
•
written 23 months ago by
amahdi779
•
0
1
vote
3
replies
216
views
updated 1 day ago by
Alex Reynolds
35k
•
written 2 days ago by
SJP
•
0
0
votes
0
replies
105
views
0
votes
1
reply
155
views
1
vote
3
replies
204
views
updated 2 days ago by
jared.andrews07
★
16k
•
written 2 days ago by
yvonneh
▴
10
3
votes
5
replies
270
views
3
votes
8
replies
6.5k
views
7 follow
updated 2 days ago by
Sd
•
0
•
written 5.1 years ago by
Nicolas Rosewick
11k
0
votes
2
replies
167
views
0
votes
1
reply
193
views
updated 1 day ago by
Chris Dean
▴
390
•
written 2 days ago by
sovrappensiero
▴
90
1
vote
2
replies
217
views
Recent Locations •
All
Cambridge, MA, 15 minutes ago
Australia, 17 minutes ago
Russia, 18 minutes ago
Russia, 23 minutes ago
United States, 24 minutes ago
Whitefish, MT, 25 minutes ago
UCLA, 26 minutes ago
Recent Awards •
All
Autobiographer to
Mathew
▴
20
Commentator to
dsull
★
6.0k
Scholar to
BioinfGuru
★
1.7k
Popular Question to
drajangirija
•
0
Popular Question to
Thanujay S
•
0
Popular Question to
SHN
▴
40
Popular Question to
Rob
▴
170
Recent Replies
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1))
It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴
10
Hi Mathew,
The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴
20
Hi,
I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴
20
Hi,
You asked three questions so I will attempt to help the best I can
**What should be the optimal GC score cutoff**
It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
•
0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
•
0
I tried the 2nd option only.
I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Traffic: 1337 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6