updated 3 hours ago by
Mathew
▴
60
•
written 22 hours ago by
Christopher
•
0
0
votes
1
reply
118
views
2
votes
2
replies
56
views
2
votes
2
replies
101
views
2
votes
1
reply
122
views
updated 13 hours ago by
Pierre Lindenbaum
161k
•
written 18 hours ago by
melissachua90
▴
70
9
votes
7
replies
7.1k
views
updated 13 hours ago by
Ruqaiya
•
0
•
written 5.7 years ago by
xiaozhongzhiping
▴
20
795
votes
167
replies
143k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
1
reply
107
views
updated 5 hours ago by
fracarb8
★
1.6k
•
written 14 hours ago by
beginner123
•
0
6
votes
4
replies
12k
views
0
votes
0
replies
60
views
15 hours ago by
analyst
▴
50
0
votes
1
reply
94
views
updated 13 hours ago by
Pierre Lindenbaum
161k
•
written 16 hours ago by
analyst
▴
50
0
votes
4
replies
214
views
0
votes
10
replies
337
views
1
vote
3
replies
165
views
3
votes
3
replies
169
views
1
vote
2
replies
162
views
0
votes
1
reply
123
views
0
votes
0
replies
87
views
1 day ago by
beantkapoor16
•
0
0
votes
0
replies
90
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
naomiboldon
•
0
1
vote
3
replies
192
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
Omics data mining
▴
260
9
votes
6
replies
12k
views
updated 8.8 years ago by
Ashutosh Pandey
12k
•
written 8.8 years ago by
biolab
★
1.4k
1
vote
7
replies
501
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 4 days ago by
schmince
•
0
0
votes
5
replies
216
views
1 day ago by
SilhouetteQ
•
0
0
votes
1
reply
113
views
updated 1 day ago by
GenoMax
142k
•
written 1 day ago by
maria.soler
•
0
0
votes
2
replies
198
views
15 hours ago by
carolofharvest
▴
40
0
votes
1
reply
153
views
2
votes
12
replies
2.7k
views
6 follow
updated 3 days ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
0
votes
0
replies
95
views
0
votes
1
reply
127
views
0
votes
0
replies
90
views
updated 1 day ago by
zx8754
11k
•
written 1 day ago by
Lambodarswain316
•
0
0
votes
1
reply
140
views
0
votes
0
replies
88
views
0
votes
1
reply
149
views
0
votes
2
replies
159
views
0
votes
0
replies
93
views
1 day ago by
jain72744
▴
10
6
votes
2
replies
161
views
updated 1 day ago by
Gordon Smyth
★
7.1k
•
written 1 day ago by
gBioStar5
▴
10
2
votes
5
replies
320
views
3
votes
1
reply
134
views
0
votes
0
replies
100
views
0
votes
0
replies
112
views
0
votes
0
replies
108
views
2 days ago by
RT
▴
10
0
votes
0
replies
108
views
2
votes
0
replies
110
views
2 days ago by
carlopecoraro2
★
2.5k
0
votes
8
replies
358
views
2 days ago by
marco.barr
▴
100
0
votes
1
reply
328
views
0
votes
2
replies
185
views
updated 1 day ago by
Ram
43k
•
written 2 days ago by
sainavyav22
•
0
3
votes
4
replies
262
views
0
votes
0
replies
137
views
0
votes
3
replies
526
views
0
votes
3
replies
213
views
0
votes
3
replies
263
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
Matthew
•
0
Recent Votes
Recent Locations •
All
Moscow, 1 minute ago
Mexico, 1 minute ago
United States, 8 minutes ago
United States, 9 minutes ago
Australia, 16 minutes ago
France, 17 minutes ago
United States, 22 minutes ago
Recent Awards •
All
Popular Question to
Kai_Qi
▴
130
Popular Question to
pramach1
▴
40
Popular Question to
vytarasov
▴
180
Teacher to
Carlo Yague
8.7k
Popular Question to
beginner123
•
0
Popular Question to
melissachua90
▴
70
Popular Question to
octpus616
▴
100
Recent Replies
Comment: Longest transcript variant per gene
by
Mathew
▴
60
Hi, why not write code to extract the longest variant?
I copied these two in a txt file called "input.txt", and made three dummy variants …
Comment: Longest transcript variant per gene
by
GenoMax
142k
https://www.biostars.org/p/107759/<br>
https://www.biostars.org/p/403649/
<!-- this is it -->
Answer: Kraken2 database
by
Mathew
▴
60
Sorry, what analysis are you trying to perform with these databases?
Based on your question, it appears you are using Kraken2 and Bracken.…
Comment: error in fun(x((i)), ...) : only defined on a data frame with all numeric alike
by
Mathew
▴
60
I looked up a publication using CIBERSORT to see how they got the package, and indeed they acquired it through official website application…
Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
by
fracarb8
★
1.6k
If you are using R, you should check the liana R implementation (https://github.com/saezlab/liana).
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
•
0
Thank you Pierre, I am going to take some time to get my head around this and report back if it works.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
•
0
Thanks for the crosspost! Just trying to get things figured out.
Answer: error in fun(x((i)), ...) : only defined on a data frame with all numeric alike
by
ATpoint
82k
To the best of my knowledge, CIBERSORT is and has always and only been available via the official website application from Stanford. Whatev…
Comment: BioLabDonkey - new Mac program for molecular biologists
by
vytarasov
▴
180
Update of BioLabDonkey - Version 5.6
- In silico PCR function is added.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
cross posted: https://stackoverflow.com/questions/78462732/
> Please mind that posting the same question to multiple sites can be perceive…
Comment: java.nio.bufferunderflowexception haplotypecaller error for bqsr reads
by
Pierre Lindenbaum
161k
command is missing, version is missing.
Answer: Failed to open VCF file
by
Pierre Lindenbaum
161k
> Error: Failed to open vcf file Fixing: No such file or directory
one of your file is missing, obviously.
Check files exist using `[…
Comment: Align paired and unpaired reads simultaneously using Bowtie2?
by
Ruqaiya
•
0
I have forward reads that didn't require any trimming except for adapter sequence. but the reverse read file required trimming so i trimmed…
Comment: Trimmomatic: What is the difference between paired and unpaired output files in
by
Ruqaiya
•
0
can we not mention unpaired ? i have a reverse read file that needs a lot of trimming but forward file is usable. I don't understand how to…
Comment: Genome Assembly task + Protein Translation, assignment advice on a question
by
rackbersingh
•
0
It is an indeed an old assignment question, I am doing revision and practicing answering questions for an upcoming test and just wanted to …
Traffic: 1067 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6