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News: International Society of Computational Biology - SCS 2017
genome genomics next-gen-sequencing
updated 11 months ago by 43k • written 7.1 years ago by ▴ 80
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745
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News: Check out precision FDA's Featured Expert Blog from Dr. Charles Eaton
biomarker Dupytrens genetic crowd-sourcing
updated 11 months ago by 43k • written 5.2 years ago by ▴ 60
1
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5.1k
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News: Course: Practical GWAS Using Linux and R
next-gen R SNP
updated 11 months ago by 43k • written 7.0 years ago by ★ 2.5k
1
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0
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923
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News: Advanced R Programming
R
updated 11 months ago by 43k • written 6.1 years ago by ★ 2.5k
1
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0
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1.2k
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News: Hands-on Training on Cloud Computing @ NIH, USA, April 30, 2018
analysis server ngs cloud
updated 11 months ago by 43k • written 6.1 years ago by ▴ 140
1
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1
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1.3k
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News: Ensembl Perl API course, April 2018
course api ensembl perl training
updated 11 months ago by 43k • written 6.3 years ago by 23k
1
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0
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505
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News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
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3
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1.2k
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News: 4th Berlin Summer School in NGS Data Analysis - October 5-9, 2020
NGS RNA-Seq DNA-Seq
updated 10 months ago by 43k • written 4.2 years ago by 11k
1
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0
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437
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News: Good bioinformatics training resources
NGS
updated 10 months ago by 161k • written 10 months ago by ▴ 80
1
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0
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886
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News: Subchallenge 2 of the precisionFDA NCI-CPTAC Mislabeling Challenge
multiomics omics challenge
updated 11 months ago by 43k • written 5.4 years ago by ▴ 40
1
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0
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984
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News: NCBI Webinar: New Variation Services for Normalizing, Remapping, and Annotating Variants
Variation dbsnp API SPDI Clinvar
updated 11 months ago by 43k • written 5.3 years ago by ▴ 70
1
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0
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684
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News: Bioconductor 3.8 Release Schedule
R bioconductor
updated 11 months ago by 43k • written 5.6 years ago by 87k
1
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0
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1000
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News: Phylogenomics course in Berlin
next-gen SNP
updated 11 months ago by 43k • written 6.1 years ago by ★ 2.5k
1
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0
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736
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News: Course: Speciation Genomics in Canada - Quebec City, 2-6 September 2019
snp R next-gen
updated 11 months ago by 43k • written 4.9 years ago by ▴ 40
1
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0
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694
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News: SNAKEMAKE course in Berlin. Last places available
Python
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
1
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0
replies
855
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News: Training in Metagenomics Data Analysis @ NIH,February 10-13,2020
Metagenomics Biomedical next-gen Data-analysis
updated 10 months ago by 43k • written 4.3 years ago by ▴ 140
1
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0
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946
views
News: Paperkast.com - paper discussion and sharing
website
updated 11 months ago by 43k • written 5.7 years ago by ▴ 30
1
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0
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419
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News: Spatial Omics course
Spatial-Omics Multiplexed-Image-Analysis
updated 6 months ago by 43k • written 8 months ago by ★ 2.5k
1
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0
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704
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News: Bioinformatics for Precision Oncology 2020 Program
cancer-biology RNA-Seq cancer
updated 10 months ago by 43k • written 4.2 years ago by ▴ 10
1
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0
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1.1k
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News: DataTech19 submission deadline and keynotes: Jared Lander, Mine Cetinkaya-Rundel, Debbie Bard
R data-science HPC python conference
updated 11 months ago by 43k • written 5.5 years ago by ▴ 20
1
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0
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1.1k
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News: LAST CALL: Advanced Python for Biologists.13-17 November 2017 Berlin
Python-Programming
updated 11 months ago by 43k • written 6.5 years ago by ★ 2.5k
1
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0
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306
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News: Course - Introduction to CRISPR
CRISPR Evolution GenomeEditing
8 months ago by carlopecoraro2 ★ 2.5k
1
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0
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1.2k
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News: Workshop for Comparative genomics with a focus on structural variation
genome structural-variant
updated 11 months ago by 43k • written 5.1 years ago by 9.7k
1
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0
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916
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News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
Assembly training RNA-Seq
updated 11 months ago by 43k • written 5.7 years ago by ▴ 140
1
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0
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412
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News: Online Training - Bioinformatics Pipeline Development with Nextflow (November 15-17, 2023)
nextflow automation pipeline development
7 months ago by David Langenberger 11k
1
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0
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1.1k
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News: Course: Rstats for biologists in Berlin (LAST CALL)
R statistics biologists
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
1
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0
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858
views
News: UniProt: Changes to Proteomes
uniprot proteome
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
1
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4
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2.0k
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News: webserver of TCGA data www.tcgaportal.org
genome RNA-Seq TCGA gene
updated 11 months ago by 43k • written 5.9 years ago by ▴ 40
1
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0
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718
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News: Training - Data visualization in R with ggplot2
R Dataviz ggplot2
updated 10 months ago by 43k • written 3.7 years ago by ★ 2.5k
1
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1
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935
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News: Webinar on Extensive Assessment of Gene Fusion Detection, Prioritization, Annotation and Characterization on 11 March 2020
detection webinar RNA-Seq gene-fusion
updated 10 months ago by 43k • written 4.2 years ago by ▴ 40
1
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0
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1.4k
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News: Advanced Sequencing Technologies & Bioinformatics Analysis Course at CSHL: November 3 - 15, 2020
course sequencing workshop
updated 10 months ago by 43k • written 4.3 years ago by 20k
1
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0
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437
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Spam: Research Training in Next-Generation Sequencing Data Analysis.
RNA-Seq ChIP-Seq
updated 10 months ago by 43k • written 3.7 years ago by 10
1
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0
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1.3k
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News: Population Genomics course online
R SNP next-gen
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
1
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2
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1.7k
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News: Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
scRNAseq webinar rna-seq single-cell
updated 11 months ago by 43k • written 5.0 years ago by ▴ 580
1
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0
replies
132
views
News: Online Live Course: Introduction to Machine Learning in R
Rstats TScourses Rlang Rproject
updated 17 days ago by 43k • written 17 days ago by ▴ 70
1
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1
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1.7k
views
News: Bioinformatics for Beginners @NIH, (Bethesda, MD, USA) Feb 13 - 16, 2018
beginners training
updated 11 months ago by 43k • written 6.5 years ago by ▴ 140
1
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0
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2.8k
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News: Genomic Data Visualization and Interpretation Workshop
Bioconductor ggplot GenVisR RNA-Seq R
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
1
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0
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1.1k
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News: ONLINE COURSE Introduction to R for ecologists and evolutionary biologists (IRFB04) This course will be delivered live
R
updated 10 months ago by 43k • written 3.9 years ago by ▴ 110
1
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0
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1.1k
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News: Crowdsourcing the Advancement of Microbiome Research: precisionFDA & Mosaic Challenges Launched!
next-gen challenge metagenomics
updated 11 months ago by 43k • written 6.2 years ago by ▴ 40
1
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0
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2.3k
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News: Multivariate analysis of ecological communities in R with the VEGAN package (VGNR01)
R
updated 11 months ago by 43k • written 6.1 years ago by ▴ 60
1
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0
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1.2k
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News: There is still time to find "hidden treasure" in the precisionFDA challenge!
next-gen-sequencing
updated 11 months ago by 43k • written 6.7 years ago by ▴ 90
1
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0
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894
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News: 7th Annual Mendelian Data Analysis Workshop - Learn bioinformatic tools for analysis of exome and genome sequence data for rare diseases.
sequence genome next-gen analysis
updated 11 months ago by 43k • written 5.1 years ago by ▴ 10
1
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2
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1.8k
views
News: Course: Applied Statistics and Bioinformatics with R and Bioconductor
Statistics R Metagenomics Bioconductor
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
1
vote
1
reply
2.0k
views
News: Bioinformatics Contest 2017. Results
contest
updated 11 months ago by 43k • written 7.1 years ago by ▴ 70
1
vote
0
replies
318
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News: course - Advanced Python Programming
Python-Programming
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
1
vote
0
replies
1.3k
views
News: First near-complete assembly of the bread wheat genome, *Triticum aestivum* - check data/compute resources used
wheat genome
updated 11 months ago by 43k • written 6.5 years ago by 141k
1
vote
1
reply
199
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 7 weeks ago by 43k • written 7 weeks ago by • 0
1
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0
replies
1.8k
views
News: Data Visualization with Python
next-gen Python
updated 11 months ago by 43k • written 5.9 years ago by ★ 2.5k
1
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0
replies
201
views
News: Online course - Introduction to Machine Learning in R for omics data
R Omics MachineLearning StatisticalLearning
3 months ago by carlopecoraro2 ★ 2.5k
1
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0
replies
1.6k
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News: Machine Learning and Visualization of High-Throughput Biomedical Data
next-gen-sequencing gene
updated 11 months ago by 43k • written 5.9 years ago by ▴ 10
900 results • Page 5 of 18
Recent Votes
How to input margin to UpsetR figure
Comment: How to assign cell types after integration in scRNA
NGS forensics: how to know if data is fabricated
Answer: ChIP-seq datasets: input samples omitted?
Comment: Help understanding how KEGG Ortholog `K00004 ` has 3 ECs associated with it (EC:
A: Deeptools plotHeatmap - Maintain Order of Input BED file
Comment: NGS forensics: how to know if data is fabricated
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Recent Replies
Comment: Downloading full alignments from Pfam by GenoMax 141k
Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
> What does clipped Fastq mean? Probably means that NCBI has already scanned and trimmed adapter sequencers. > both forward and revers…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
You can use the default `adapters.fa` file included in the `resources` folder of [**BBMap suite**][1] (program to use is `bbduk.sh`) or a p…
Comment: How many reads for WGS Sequencing? by GenoMax 141k
Only way to find out is to try. It may work but if it is not going to then you will find that out quick (process would likely crash because…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Also, there is no mention of adapter sequence so which adapter sequence should i use to remove it from some other reads?
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Also, Do you think i can reproduce at least most part of the data from the paper just on my laptop? It has 4 logical processors (Intel(R) C…
Comment: NGS forensics: how to know if data is fabricated by Philipp Bayer 8.3k
While I think this is an interesting case, I've before found cleaned 'raw' data on SRA. It happens: bioinformaticians receive the raw data,…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
1. What does clipped Fastq mean? both forward and reverse reads in the same file? 2. Why would you remove 2000bp contigs? I feel it will gi…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
Well, I downloaded both the reads from-[LINK][1]. Thats all i did. Thats the only thing i need to do, right? I'l try spades. [1]: http…
Comment: How to assign cell types after integration in scRNA by Francesco ▴ 10
Thanks for the fast reply.. however i had only partially understood the answer. Is correct saying that low-representation integration and b…
Answer: Can I run cellassign on samples independently if there is batch effect present? by Francesco ▴ 10
Hi! Whenever you do make independent analysis or aggregate data and analyze them, most cell type assignment tools start from raw counts to …
Comment: gvcf joint calling by zihanss • 0
Thanks for your comment, I get it now.
Answer: ChIP-seq datasets: input samples omitted? by ATpoint 82k
In my hands (and from what I know based on many years here) inputs are almost exclusively used during peak calling to correct for loci-spec…
Comment: How to assign cell types after integration in scRNA by ATpoint 82k
No difference here. After all you typically want a label per cluster/group, so either subset to the control condition to do the assignment,…
Comment: Differential Expression using Isoseq-supplemented reference transcriptome by gaoanwei • 0
I found the question and ASK the GPT4 turbo
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