updated 29 days ago by
Pierre Lindenbaum
161k
•
written 4 weeks ago by
fred.s.kremer
▴
110
2
votes
2
replies
267
views
2
votes
10
replies
822
views
2
votes
5
replies
1.6k
views
updated 24 days ago by
andorjkiss
▴
40
•
written 15 months ago by
javanokendo
▴
60
2
votes
4
replies
316
views
9 days ago by
kirill.zaslavsky
•
0
2
votes
3
replies
1.1k
views
2
votes
7
replies
814
views
updated 7 days ago by
joe
▴
510
•
written 8 days ago by
quentinperriere
•
0
2
votes
2
replies
259
views
2
votes
4
replies
303
views
2
votes
5
replies
669
views
2
votes
0
replies
204
views
2
votes
2
replies
1.6k
views
2
votes
9
replies
818
views
2
votes
0
replies
1.8k
views
updated 9 days ago by
Ram
43k
•
written 3.4 years ago by
chatterjee.arumoy
▴
50
2
votes
18
replies
1.6k
views
2
votes
3
replies
254
views
2
votes
4
replies
259
views
2
votes
5
replies
683
views
1
vote
0
replies
149
views
1
vote
4
replies
389
views
updated 12 days ago by
BioinfGuru
★
1.7k
•
written 14 days ago by
Morteza
•
0
1
vote
0
replies
539
views
1
vote
1
reply
2.7k
views
1
vote
1
reply
175
views
1
vote
2
replies
208
views
1
vote
1
reply
413
views
updated 5 days ago by
Gordon Smyth
★
7.0k
•
written 7 days ago by
Chris
▴
260
1
vote
2
replies
287
views
9 days ago by
bp22
▴
80
1
vote
2
replies
1.7k
views
1
vote
3
replies
6.1k
views
1
vote
4
replies
2.8k
views
updated 8 days ago by
Ram
43k
•
written 5.1 years ago by
grant.hovhannisyan
★
2.6k
1
vote
5
replies
260
views
updated 3 days ago by
Ram
43k
•
written 3 days ago by
marco.barr
▴
80
1
vote
3
replies
255
views
updated 24 days ago by
dariober
14k
•
written 24 days ago by
leranwangcs
▴
120
1
vote
2
replies
315
views
updated 10 days ago by
Istvan Albert
100k
•
written 12 days ago by
Jiang
•
0
1
vote
1
reply
179
views
1
vote
4
replies
812
views
1
vote
1
reply
225
views
updated 8 days ago by
Ram
43k
•
written 8 days ago by
jammydodger123456
▴
40
1
vote
1
reply
462
views
updated 17 days ago by
chrchang523
10k
•
written 17 days ago by
dsbusiness135
▴
10
1
vote
3
replies
205
views
1
vote
6
replies
1.6k
views
updated 10 days ago by
Ram
43k
•
written 3.8 years ago by
amirmehrgou
▴
10
1
vote
1
reply
400
views
1
vote
0
replies
368
views
1
vote
2
replies
922
views
1
vote
0
replies
155
views
1
vote
1
reply
163
views
1
vote
3
replies
350
views
updated 24 days ago by
Pierre Lindenbaum
161k
•
written 25 days ago by
Max
•
0
1
vote
2
replies
821
views
1
vote
0
replies
1.1k
views
updated 17 days ago by
Ram
43k
•
written 3.5 years ago by
tushard1987
▴
10
1
vote
4
replies
280
views
updated 24 days ago by
BioinfGuru
★
1.7k
•
written 25 days ago by
Netanel
•
0
1
vote
3
replies
347
views
updated 9 days ago by
ATpoint
82k
•
written 12 days ago by
naveedhasan2000
•
0
1
vote
2
replies
808
views
1
vote
1
reply
247
views
1
vote
2
replies
1.0k
views
updated 23 days ago by
Ram
43k
•
written 2.4 years ago by
adnan.lahuf
•
0
Recent Votes
Recent Locations •
All
United Kingdom, just now
Spain. Universidad de Córdoba, 1 minute ago
France, 1 minute ago
United States, 2 minutes ago
Germany, 4 minutes ago
Estonia, 4 minutes ago
Germany, 4 minutes ago
Recent Awards •
All
Popular Question to
sapuizait
▴
10
Popular Question to
zdiazmar
▴
30
Popular Question to
hkarakurt
▴
180
Student to
John Torcivia
▴
70
Popular Question to
bioinfo
▴
150
Recent Replies
Comment: CDS vs cDNA vs transcript for mapping RNA-Seq reads
by
Antonio R. Franco
★
5.1k
You cannot do it with Kallisto either. In fact, the indexation will fail in attempting to index a genome file
Comment: PCA plot
by
ATpoint
82k
What is your question? Add details and clarity. Ask a precise question and please avoid opening more questions on the same underlying issue…
Comment: genome assembly records not present in assembly_summary.txt
by
Joe
21k
If you have the accession numbers can you not use something like `eutils`?
Comment: what is the purpose of indexing the reference genome (Kallisto)
by
ATpoint
82k
For question 1: For question 1: Purpose of indexing a genome/transcriptome/book/anything: https://www.biostars.org/p/212594/
For question …
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
Pierre Lindenbaum
161k
> Next, I tried using bedtools window
but in your original post you said
> tried finding the intersection of these bed files using bedto…
Comment: How to trim transcripts using information from NCBI contamination screen report
by
Lada
▴
30
Thank you very much! I tried it out! This is a handy tool useful for many different applications, and in regards to my problem - although …
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
J
•
0
Thank you for replying Pierre.
I first added a third column to the SNP bed file, so that I would get a range of 1 for each SNP
awk 'B…
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
Pierre Lindenbaum
161k
> using bcftools
Show us what you tried
Answer: gvcf joint calling
by
Jeremy Leipzig
22k
> Hi, guys, there is a question about the genomic gVCF file. I wonder
> that since gVCF contains the non-var block records, why after merge…
Comment: Missing protein (VEGF-A) in String db
by
shalespringer
•
0
Thank you for replying here; this helped me figure out why MAPK10 was missing from my results. It was also marked as a pseudogene in the En…
Comment: How to convert plink files to Hapmap Format
by
Sofia
•
0
These are the first lines of the output: (Please is it normal to have NA in the P value column ?)
CHR …
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
•
0
So I used the barcodes that I created (combos of positions 1-10 and 11-20) and I obtained similar alignment stats as the paper I pulled the…
Comment: How to convert plink files to Hapmap Format
by
Sofia
•
0
Thank you so much, it actually worked!
Answer: Rare Disease Variant Pathway Analysis
by
LauferVA
4.2k
Hi @efc1e545 ,
First a caveat. the information we most need in order to help guide you to a successful conclusion is not provided in thi…
Answer: Sequence read length shorter than flow cell specification
by
swbarnes2
14k
The company probably had you share your run with someone who needed the extra bases.
So you get the extra bases free. Just use them unle…
Traffic: 2900 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6