updated 13 days ago by
Ram
43k
•
written 3.8 years ago by
amirmehrgou
▴
10
1
vote
6
replies
1.6k
views
1
vote
4
replies
2.8k
views
updated 11 days ago by
Ram
43k
•
written 5.1 years ago by
grant.hovhannisyan
★
2.6k
1
vote
1
reply
176
views
1
vote
2
replies
336
views
updated 25 days ago by
jkbonfield
★
1.2k
•
written 6 weeks ago by
geocarvalho
▴
360
1
vote
3
replies
2.5k
views
updated 6 days ago by
chrchang523
10k
•
written 6.1 years ago by
Ginevra
▴
10
1
vote
1
reply
466
views
updated 20 days ago by
chrchang523
10k
•
written 20 days ago by
dsbusiness135
▴
10
1
vote
1
reply
827
views
1
vote
2
replies
811
views
1
vote
2
replies
276
views
1
vote
8
replies
3.4k
views
1
vote
3
replies
269
views
5 days ago by
Art1ess
•
0
1
vote
1
reply
197
views
1
vote
0
replies
161
views
1
vote
1
reply
183
views
1
vote
4
replies
348
views
23 days ago by
diqixiaoyaoer
▴
10
1
vote
2
replies
1.7k
views
1
vote
3
replies
355
views
updated 27 days ago by
Pierre Lindenbaum
161k
•
written 28 days ago by
Max
•
0
1
vote
2
replies
241
views
updated 6 days ago by
Gordon Smyth
★
7.0k
•
written 20 days ago by
Netanel
•
0
1
vote
3
replies
261
views
updated 26 days ago by
dariober
14k
•
written 27 days ago by
leranwangcs
▴
120
1
vote
1
reply
250
views
1
vote
0
replies
136
views
1
vote
1
reply
186
views
1
vote
1
reply
411
views
1
vote
3
replies
219
views
1
vote
0
replies
368
views
1
vote
2
replies
928
views
1
vote
1
reply
228
views
1
vote
0
replies
146
views
1
vote
0
replies
162
views
1
vote
4
replies
398
views
updated 15 days ago by
BioinfGuru
★
1.7k
•
written 16 days ago by
Morteza
•
0
1
vote
0
replies
676
views
updated 12 days ago by
Ram
43k
•
written 5.2 years ago by
Sebastian Hesse
▴
340
1
vote
3
replies
1.8k
views
1
vote
1
reply
175
views
1
vote
2
replies
825
views
1
vote
5
replies
346
views
updated 17 days ago by
jkbonfield
★
1.2k
•
written 25 days ago by
sansan_96
▴
80
1
vote
2
replies
209
views
0
votes
0
replies
152
views
0
votes
0
replies
1.8k
views
updated 11 days ago by
Ram
43k
•
written 7.2 years ago by
vakul.mohanty
▴
270
0
votes
0
replies
156
views
0
votes
0
replies
199
views
0
votes
1
reply
754
views
0
votes
5
replies
2.1k
views
0
votes
0
replies
111
views
25 days ago by
Shicheng Guo
★
9.4k
0
votes
0
replies
110
views
0
votes
0
replies
194
views
0
votes
0
replies
159
views
0
votes
0
replies
734
views
0
votes
2
replies
224
views
0
votes
0
replies
98
views
Recent Votes
Recent Locations •
All
USA, 2 minutes ago
South Korea, 8 minutes ago
Sydney, Australia., 10 minutes ago
South Korea, 13 minutes ago
Palau, 16 minutes ago
United States, 18 minutes ago
Perth, Australia, 23 minutes ago
Recent Awards •
All
Teacher to
Jeremy Leipzig
22k
Popular Question to
AshleeThomson
▴
80
Popular Question to
michael.flower.14
▴
180
Popular Question to
Nitin Narwade
★
1.6k
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
rj.rezwan
•
0
Popular Question to
husensofteng
▴
410
Recent Replies
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
540
Working on it - it's actually a bit difficult. Low coverage of ribosomal proteins. Low coverage of housekeeping genes ...I'm trying to find…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
540
I'm a bit against pubpeer - have you ever posted there?
My gripe with them is that the posts are heavily moderated and EDITED to the point…
Comment: NGS forensics: how to know if data is fabricated
by
Philipp Bayer
8.4k
Thanks Mensur! I'd add that in 9 out of 10 cases, you won't receive a reply to a request for raw data. That's just how scientists are, does…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
I had downloaded the two files in a similar manner actually.
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
ok, i'll try to use fastp. I have only used trimmomatic and cutadapt till now and they dont identify on its own. Except the graph in fastqc…
Comment: How many reads for WGS Sequencing?
by
Ruqaiya
•
0
got it! even if i'm doing the assembly for paired end with both the files do i have set the threshold to 1000bp ?
Comment: NGS forensics: how to know if data is fabricated
by
Philipp Bayer
8.4k
i've been in our org trying to push such a detector, our use-case is much more limited: I want to make simulated eDNA libraries as real as …
Answer: Differential Expression using Isoseq-supplemented reference transcriptome
by
Gordon Smyth
★
7.0k
> What is the best method to test for differential abundance at the isoform level? Salmon returns TPM values instead of the counts which Li…
Answer: Finding batch and outlayers
by
Tigran
•
0
![enter image description here][1]
[1]: /media/images/aa60b9ef-b08c-4093-9f0d-fb656a5c
Comment: NGS forensics: how to know if data is fabricated
by
benformatics
3.9k
Can you post an IGV screenshot of what this looks like?
Comment: NGS forensics: how to know if data is fabricated
by
benformatics
3.9k
Yeah some of the Illumina machines pre-trim adapters (not sure if this is still the standard). I've also definitely also seen quality-trimm…
Comment: PDB related issue
by
noodle
▴
540
You can typically find much more useful info in the cif file, for example what you've found is called '_atom_site.pdbx_PDB_ins_code ' and d…
Comment: PDB related issue
by
Mensur Dlakic
★
27k
The best way to find out is to read the original paper. My guess is that the residue has been crystallized in alternative conformations, wh…
Answer: NGS forensics: how to know if data is fabricated
by
Mensur Dlakic
★
27k
I share the opinion by @philippbayer I have seen enough questionable things in life and in science to keep me permanently jaded, but there…
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★
27k
I downloaded the data in two files from the link you provided. With this command:
megahit -1 ERR072246_1.fastq.gz -2 ERR072246_2.fastq…
Traffic: 2733 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6