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121,958 results • Page
169 of 2440
Sort: Rank
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Votes
Replies
0
votes
2
replies
1.2k
views
Problems with fastq-dump --split-files returns only one file for paired-end sample
sratoolkit
fastq-dump
split-spot
21 months ago by
Wren
• 0
0
votes
0
replies
586
views
If the names of miRNAs are the same for different species, are they the same sequence?
miRNA
21 months ago by
Apprentice
▴ 190
0
votes
0
replies
544
views
Capture periodicity and uniformity in a feature
fragments
dna
Fragmentomics
21 months ago by
Paulo
• 0
2
votes
0
replies
2.5k
views
How to evaluate the MMseqs2 Clusters?
MMSeq
FASTA
Clustering
Protein
MMseqs2
21 months ago by
Bioinformatics_begginner
▴ 20
1
vote
8
replies
2.9k
views
counts of cite-seq-count vs. cellrenager varies tremendously
citeseq-count
cellranger
cite-seq
scRNA-seq
updated 21 months ago by
ATpoint
89k • written 2.2 years ago by
Assa Yeroslaviz
★ 1.9k
0
votes
6
replies
1.6k
views
Error: Segmentation Fault in BCL2FASTQ
bcl2fastq
21 months ago by
Luna
• 0
0
votes
1
reply
730
views
HiC-Pro allValidPairs to bam
HiC-Pro
updated 21 months ago by
Ram
45k • written 21 months ago by
Diego
▴ 110
2
votes
4
replies
3.7k
views
How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objects in R?
scrna-seq
seurat
signac
21 months ago by
mohammedtoufiq91
▴ 270
0
votes
3
replies
1.1k
views
mirdeep2 mapper.pl generates empty arf folder while .fa folder has data
mapper.pl
mirdeep2
updated 21 months ago by
Ram
45k • written 21 months ago by
gkarere
• 0
1
vote
2
replies
1.0k
views
16S amplicon sequencing input data (spreadsheet): barcode vs. linker primer seqs?
barcode
amplicon
16s
21 months ago by
sovrappensiero
▴ 100
13
votes
8
replies
4.9k
views
6 follow
Identifying long stretches of Ns
genome
R
updated 21 months ago by
André
• 0 • written 7.9 years ago by
anshupa.vssut
▴ 50
2
votes
5
replies
1.4k
views
Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
chromnames
updated 21 months ago by
Ram
45k • written 21 months ago by
gernophil
▴ 130
0
votes
1
reply
1.1k
views
Get Cluster PF % and Cluster Density from Interop module using python
Interop
python
21 months ago by
kspata
▴ 90
8
votes
4
replies
2.4k
views
Plot genes along scaffolds and sort scaffolds according to their length
R
plot
genes
scaffold
updated 20 months ago by
n.s.j.vandervelden
▴ 90 • written 5.1 years ago by
Chvatil
▴ 140
0
votes
2
replies
886
views
Annotate BED file
bed
annotation
updated 21 months ago by
Ram
45k • written 21 months ago by
Andrea
▴ 10
0
votes
0
replies
644
views
How to match identifier to identifier in order to make a relationship in neo4j?
R
neo4j
pathway
21 months ago by
prithvi.mastermind
▴ 60
0
votes
2
replies
1.4k
views
Multi-mapped reads in Ribo-Seq data, discard or keep?
STAR
ribo-seq
multi-mapped
rna-seq
TE
written 22 months ago by
Carmen
• 0
0
votes
3
replies
1.5k
views
Gemoma error with gff file
gemoma
annotation
21 months ago by
gubrins
▴ 350
1
vote
3
replies
1.3k
views
Kallisto-Bustools Output prpblems
Bustools
Kallisto
updated 21 months ago by
dsull
★ 7.7k • written 21 months ago by
myoui3122010
▴ 30
0
votes
2
replies
937
views
sample data for plant RNA seq analysis
RNA-seq
plant
updated 21 months ago by
jv
★ 1.9k • written 21 months ago by
javadkarimi10
• 0
0
votes
2
replies
855
views
How to obtain members of superfamily (CDD)
Superfamily
Blast
CDD
21 months ago by
tt
• 0
4
votes
4
replies
4.6k
views
Tools to plot gene arrow diagram
gene-arrow-diagram
BGC
updated 20 months ago by
n.s.j.vandervelden
▴ 90 • written 3.0 years ago by
m.koohi.m
▴ 120
11
votes
4
replies
3.6k
views
Construct a gene arrow map to show the gene features
gene map
Coordinates
Annotation
updated 20 months ago by
n.s.j.vandervelden
▴ 90 • written 8.5 years ago by
utkarsh.sood
▴ 40
0
votes
3
replies
3.0k
views
Gene cluster visualization
gene cluster visualization
antiSMASH
updated 20 months ago by
n.s.j.vandervelden
▴ 90 • written 6.8 years ago by
Bhushan Dhamale
• 0
1
vote
1
reply
724
views
Extract cis and trans mutations from bam file
Mutations
BAM
VCF
SNPS
updated 21 months ago by
GenoMax
154k • written 21 months ago by
RD
▴ 30
8
votes
8
replies
3.8k
views
Problem with Mamba
snakemake
mamba
conda
updated 21 months ago by
gernophil
▴ 130 • written 21 months ago by
Begonia_pavonina
▴ 210
5
votes
4
replies
7.0k
views
How to obtain distinct/uniqe rows from GenomicRanges object
R
GenomicRanges
bioconductor
updated 21 months ago by
Ram
45k • written 6.3 years ago by
gundalav
▴ 380
1
vote
1
reply
712
views
RNA-Seq and ATAC-Seq quality check
ATAC-Seq
RNA-Seq
updated 21 months ago by
bk11
★ 3.1k • written 21 months ago by
qudrat.nii
▴ 40
4
votes
14
replies
2.5k
views
remove white space in fastq file
fastq
updated 21 months ago by
GenoMax
154k • written 21 months ago by
gkarere
• 0
0
votes
0
replies
544
views
Multiple sequence alignment: amino acid similarity
blast
alignment
21 months ago by
dec986
▴ 380
2
votes
3
replies
1.5k
views
Why Does the Same Compound Have Different CIDs in PubChem?
PubChem
updated 21 months ago by
GenoMax
154k • written 21 months ago by
Elka
▴ 10
0
votes
0
replies
1.1k
views
Tool:
What do you think about Tfinder? a tool to find individual motifs in DNA sequence. Help us ameliorate
Motifs
Transcription-factor
updated 21 months ago by
Ram
45k • written 21 months ago by
Naima
• 0
0
votes
4
replies
1.6k
views
There are several lines in Manhattan plot.
fungi
plink
SNP
Manhattan-plot
GWAS
updated 21 months ago by
bk11
★ 3.1k • written 21 months ago by
kgwkk2
• 0
0
votes
1
reply
734
views
double @HD header for bam
bam
updated 21 months ago by
Ram
45k • written 21 months ago by
ZheFrench
▴ 590
0
votes
3
replies
919
views
Comparison of bed files and output matrix
bedtools
bed
COOC
diagram
updated 21 months ago by
GenoMax
154k • written 21 months ago by
1934822857
• 0
1
vote
1
reply
893
views
Strange RNA-Seq Results When Adding Covariates
covariates
RNA-Seq
DESeq2
updated 21 months ago by
Ram
45k • written 21 months ago by
robert.flynn.21
▴ 10
0
votes
3
replies
1.2k
views
STAR SjdbOverHang specification
STAR
21 months ago by
CTLong
▴ 140
0
votes
2
replies
809
views
Alignment with AS below threshold in bam file
bam
bwa
alignment
mem
21 months ago by
Goldberry
• 0
0
votes
2
replies
935
views
ATCC cell line source
cell-line
NGS
ATCC
21 months ago by
octpus616
▴ 120
0
votes
0
replies
500
views
Generating a Scores Plot From RNA-Seq Data
Sequencing
Plotting
RNA-Seq
RNA
21 months ago by
robert.flynn.21
▴ 10
0
votes
0
replies
512
views
Extracting Clusters from a Dendrogram (RNA Seq Data)
RNA-Seq
dendrogram
HOX
clusters
genes
21 months ago by
robert.flynn.21
▴ 10
2
votes
5
replies
1.5k
views
Calling variants from a diploid assembly mapped on a haploid reference, tool suggestion?
SNP
phased
diploid
updated 21 months ago by
GenoMax
154k • written 21 months ago by
Axzd
▴ 80
0
votes
0
replies
463
views
How to normalize for Correlation network with two different parameters
Correlation
Normalization
21 months ago by
Mary
• 0
3
votes
12
replies
7.2k
views
10 follow
How to analyze Infinium Mouse Methylation BeadChip array data?
Methylation
Experience
Illumina
Mouse
updated 17 months ago by
Tawny
▴ 180 • written 4.4 years ago by
julia_geh
▴ 20
0
votes
1
reply
1.1k
views
CADD INDEL FILE
INDEL
CADD
updated 21 months ago by
sindy_roby
• 0 • written 4.2 years ago by
Filago
▴ 110
5
votes
6
replies
1.7k
views
LncRNA pipeline
lncrna
RNA-Seq
NGS
updated 21 months ago by
GenoMax
154k • written 21 months ago by
Researcher
▴ 30
0
votes
0
replies
452
views
How can I pass multiple GO-BP terms in neo4j to make a network with a single subtype?
R
neo4j
pathway
21 months ago by
prithvi.mastermind
▴ 60
0
votes
0
replies
471
views
Identifying Multipartite viruses (Viral Bioinformatics)
genomics
21 months ago by
pixie@bioinfo
★ 1.5k
3
votes
3
replies
1.6k
views
Kallisto-bustools output to Seurat Object
Bustools
Kallisto
Seurat
updated 21 months ago by
GenoMax
154k • written 21 months ago by
myoui3122010
▴ 30
0
votes
1
reply
697
views
Help requiring DEXSeq in R
differential-splicing-analysis
DEXSeq
R
updated 21 months ago by
Trivas
★ 1.9k • written 21 months ago by
achanda
• 0
121,958 results • Page
169 of 2440
Recent Votes
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It's a little unclear what you mean by "I was able to use wgsim, but when I tried aligning the paired-reads, it's not aligning together."
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