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121,958 results • Page
176 of 2440
Sort: Rank
Rank
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Votes
Replies
1
vote
5
replies
1.2k
views
vcftools
vcftools
updated 22 months ago by
Barista
▴ 10 • written 22 months ago by
sevda
• 0
3
votes
2
replies
3.2k
views
Can't do runPCA after merging a splited Seurat object before UMAP
scRNA-seq
Seurat
22 months ago by
wanaga3166
▴ 10
0
votes
0
replies
568
views
How do I pick the best conditions for scATAC-Seq after a series of bulk test runs?
ATAC-seq
22 months ago by
cyril-cros
▴ 950
0
votes
1
reply
641
views
Microbial gene coverage from blast result
gene
coverage
22 months ago by
aanchal.yadav
• 0
0
votes
0
replies
663
views
extracting Uniprot IDs for Kegg pathways
mapping
uniprot
R
kegg
clusterprofiler
22 months ago by
Assa Yeroslaviz
★ 1.9k
0
votes
3
replies
1.3k
views
GAF files in pangenomics
GO
annotation
updated 22 months ago by
colindaven
8.0k • written 22 months ago by
Pooja
• 0
2
votes
0
replies
985
views
Herald:
The Biostar Herald for Monday, December 04, 2023
herald
22 months ago by
Biostar
3.6k
4
votes
3
replies
2.1k
views
how to calculate duplicated reads in single cell RNA 10x genomics data
singlecellRNA
10x-genomics
updated 22 months ago by
GenoMax
154k • written 22 months ago by
archanaverma433
▴ 10
1
vote
3
replies
1.1k
views
Funannotate iprscan Creates empty file
funannotate
interproscan
fungus
annotation
7 months ago by
SomeOne
▴ 240
0
votes
0
replies
507
views
News:
Online course: Introduction to Python, February 12th-March 11th, 2024
python
courses
22 months ago by
Sole
• 0
2
votes
1
reply
850
views
Issue softclipping reads when they belong and don't belong to a common amplicon
Samtools
softclip
updated 22 months ago by
aw7
▴ 390 • written 22 months ago by
ManuelDB
▴ 110
2
votes
2
replies
1.4k
views
4 Fastq files for a single run generated by 10X
scRNA-Seq
Fastq
SRA
10X
22 months ago by
hkarakurt
▴ 200
0
votes
4
replies
1.5k
views
How to resolve the error of protein lacking a stop codon when using GenomeThreader for homology prediction?
genome
threader
22 months ago by
Wren
• 0
4
votes
6
replies
1.9k
views
6 follow
Forum:
Bioinformatics: what do you think of it in the next 20 years?
future
updated 22 months ago by
Ram
45k • written 22 months ago by
Daniel
• 0
1
vote
1
reply
1.0k
views
Process Truncated fastq file
fastqc
fastq
updated 22 months ago by
GenoMax
154k • written 22 months ago by
waqaskhokhar999
▴ 160
2
votes
5
replies
1.7k
views
kallisto index build difference according to version
index
version
kallisto
updated 22 months ago by
dsull
★ 7.7k • written 22 months ago by
estilo
• 0
0
votes
1
reply
653
views
How to convert UNITE dataset into ecoPCR format to perform insilico PCR?
obiconvert
ecoPCR
updated 22 months ago by
vinranke-adel0j
• 0 • written 23 months ago by
shristymaurya012
• 0
9
votes
9
replies
2.2k
views
6 follow
Which language use as a beginner in Bioinformatics and Computational genomics
Computational-genomics
updated 22 months ago by
Mensur Dlakic
★ 30k • written 22 months ago by
2021ag7698
▴ 10
1
vote
2
replies
889
views
locuszoom error
locuszoom
22 months ago by
nanodano
▴ 30
0
votes
2
replies
1.0k
views
sequencing data from different samples in the Integrative Genome Viewer (IGV)
IGV
VARIANT
updated 22 months ago by
Ram
45k • written 22 months ago by
José de la Trinidad
• 0
0
votes
2
replies
1.7k
views
Understanding gene level copy number data from TCGAbiolinks
CNV
TCGA
updated 22 months ago by
Zhenyu Zhang
★ 1.3k • written 2.9 years ago by
billyK
• 0
2
votes
3
replies
1.4k
views
Error in blast+
PowerShell
blast
Windows
updated 22 months ago by
Ram
45k • written 22 months ago by
Alexis
• 0
1
vote
3
replies
1.2k
views
Bam files generated with STAR cause a segmentation fault core dump error when used with another tool
RNA-Seq
mapping
updated 22 months ago by
GenoMax
154k • written 22 months ago by
bkffadia
▴ 10
0
votes
1
reply
762
views
using RMA normalized microarray in Limma
GEOdatabase
Microarray
limma
RMA
updated 22 months ago by
ATpoint
89k • written 22 months ago by
Fluke
▴ 10
4
votes
2
replies
1.9k
views
Can't install hisat2 with miniconda
unix
miniconda
hisat2
22 months ago by
Ozymandeus
▴ 30
0
votes
0
replies
594
views
Should I perform eQTL colocalization for just one of eGenes at a time?
colocalization
coloc
eCaviar
eQTL
22 months ago by
maximal_life
▴ 20
2
votes
3
replies
960
views
Dimensionality reduction on data sets with variable dimensions
PCA
dimensionality_reduction
RNA_secondary_structure
updated 22 months ago by
Mensur Dlakic
★ 30k • written 22 months ago by
rtrende
▴ 80
4
votes
2
replies
918
views
KEGG DATABASE
DATABASE
KEGG
updated 22 months ago by
jv
★ 1.9k • written 22 months ago by
Sijjil
• 0
5
votes
2
replies
2.2k
views
Fastest way to convert BED to GTF/GFF with gene_ids?
gff
convert
bed
gtf
updated 22 months ago by
cmdcolin
★ 4.3k • written 22 months ago by
alejandrogzi
▴ 150
4
votes
1
reply
1.2k
views
Tool:
NOEL: An extremely fast Non-Overlapping Exon Length calculator written in Rust
gene-annotation
exon-length
updated 15 months ago by
Alice
• 0 • written 23 months ago by
alejandrogzi
▴ 150
2
votes
3
replies
1.3k
views
Generate a sequence of specific length with a list of motifs and intersperse with spacers
python
R
perl
motif
sequence
updated 22 months ago by
mopejij688
• 0 • written 4.3 years ago by
rykerklie7
▴ 50
1
vote
3
replies
1.4k
views
best BLAST/alignment hits - which criteria is more important?
blast
22 months ago by
min
• 0
3
votes
4
replies
1.5k
views
Is bisulfite-seq data from different studies comparable with each other?
Methylation
updated 22 months ago by
NextGenSeek
▴ 10 • written 22 months ago by
CTLong
▴ 140
0
votes
1
reply
773
views
Issue with genetic QC sex check
plink
22 months ago by
kl
▴ 20
0
votes
0
replies
480
views
BioSQL Unable to remove database using server.remove_database
BioSQL
biopython
Mysql
Python
22 months ago by
Navindu
• 0
0
votes
0
replies
770
views
bootstraped treemix show no migration event
Treemix
Bootstrap
21 months ago by
reza
▴ 300
1
vote
1
reply
1.2k
views
Are 10x cellranger-arc ATAC bam files deduplicated?
10x
single-cell
updated 22 months ago by
Ram
45k • written 22 months ago by
WaterMetal
• 0
5
votes
7
replies
3.4k
views
From TPM to raw counts
tpm
Deconvolution
rnaseq
20 months ago by
Gama313
▴ 130
0
votes
2
replies
1.3k
views
Low coverage whole genome sequencing reveal excess heterozygosity for multiple SNPs. How to filter?
lcWGS
WGS
heterozygosity
22 months ago by
beausoleilmo
▴ 610
3
votes
3
replies
1.5k
views
How to obtain data on the coordinates of the Exon region from UCSC
hg19
UCSC
exon
22 months ago by
ayasu
• 0
5
votes
5
replies
3.6k
views
Using metagenome assembly and binning to identify and mitigate contamination in a genome
genomes
contamination
metagenomics
22 months ago by
btc347
• 0
0
votes
2
replies
2.4k
views
Does GNOMAD use all LOFTEE LoF filters?
loftee
gnomad
LOF
ensembl
vep
updated 22 months ago by
AMARU
• 0 • written 5.7 years ago by
brismiller
▴ 60
0
votes
3
replies
1.6k
views
"MethylKit" package for WGBS data
MethylKit
WGBS
updated 22 months ago by
viveksomya123
• 0 • written 4.2 years ago by
shrinka.genetics
▴ 40
4
votes
3
replies
1.3k
views
GO categorization
Ontology
Gene
updated 22 months ago by
geneontologyhelp
▴ 470 • written 22 months ago by
m.habib
• 0
0
votes
0
replies
399
views
is there a way to set colors pallets for glMDSPlot(x)?
Glimma
glMDSPlot
22 months ago by
James
• 0
0
votes
0
replies
989
views
Job:
Postdoc in comparative genomics of plant-associated bacteria (Polytechnic University of Madrid, SPAIN)
evolution
genomics
mutation
bacteria
genomes
22 months ago by
Alejandro
• 0
0
votes
1
reply
961
views
The number of variations in the pan-genome is reduced compared to the variations in the input VCF file
vg
updated 22 months ago by
Jordan M Eizenga
▴ 760 • written 22 months ago by
Wenke
• 0
0
votes
0
replies
797
views
Job:
Assistant Professor: Molecular Biology
Biology
Molecular
UCSD
22 months ago by
UCSDBioSci
▴ 30
0
votes
0
replies
720
views
Compute matrix skipping many regions stating not found in compute matrix output
computematrix
Deeptools
22 months ago by
mavy
▴ 10
0
votes
0
replies
631
views
How to find promoters (such as GC box and TATA box) in set of genes using bioinformatics analysis ?
promoter
motif
updated 22 months ago by
Ram
45k • written 22 months ago by
shome
▴ 10
121,958 results • Page
176 of 2440
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I believe the pairs will only have common sequence (e.g. the pairs will "overlap") if the insert size is small. the wgsim program has a fla…
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Try to switch to percentage view of this graph. Stacked bar charts with different heights can sometimes be misleading.
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Sorry about that. It's when I align the paired reads together like the left and righ, they should align with common sequence at some ends, …
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