1
vote
1
reply
113
views
0
votes
0
replies
69
views
2
votes
6
replies
1.9k
views
8
votes
4
replies
1.4k
views
updated 22 hours ago by
fileyfood
▴
10
•
written 4.1 years ago by
jamie.pike
▴
90
839
votes
170
replies
179k
views
112 follow
updated 6 weeks ago by
Biostar
3.6k
•
written 8.5 years ago by
Istvan Albert
102k
7
votes
12
replies
2.7k
views
3
votes
3
replies
1.3k
views
updated 23 hours ago by
fileyfood
▴
10
•
written 2.6 years ago by
andre.arrudalima
▴
80
2
votes
5
replies
1.3k
views
updated 23 hours ago by
fileyfood
▴
10
•
written 19 months ago by
andre.arrudalima
▴
80
5
votes
3
replies
1.2k
views
updated 23 hours ago by
fileyfood
▴
10
•
written 4.2 years ago by
shwetamgr1
▴
20
40
votes
12
replies
11k
views
13 follow
updated 23 hours ago by
fileyfood
▴
10
•
written 15.3 years ago by
Giovanni M Dall'Olio
28k
5
votes
2
replies
2.1k
views
2
votes
3
replies
1.7k
views
14
votes
7
replies
10k
views
1
vote
2
replies
1.0k
views
3
votes
3
replies
4.0k
views
updated 1 day ago by
fileyfood
▴
10
•
written 9.3 years ago by
sviatoslav.kendall
▴
980
1
vote
1
reply
157
views
2
votes
10
replies
464
views
0
votes
1
reply
184
views
updated 2 days ago by
Mensur Dlakic
★
29k
•
written 2 days ago by
benjamin.kellman
•
0
0
votes
4
replies
275
views
7 hours ago by
am29
▴
60
0
votes
0
replies
143
views
2 days ago by
Physalia-courses
★
2.6k
3
votes
0
replies
177
views
3 days ago by
Ming Tommy Tang
★
4.6k
0
votes
1
reply
208
views
2
votes
1
reply
752
views
2
votes
1
reply
242
views
updated 3 days ago by
GenoMax
151k
•
written 3 days ago by
rajdeepboral00
▴
70
1
vote
0
replies
187
views
2
votes
4
replies
390
views
updated 3 days ago by
colindaven
7.6k
•
written 3 days ago by
sarahmanderni
▴
130
6
votes
2
replies
1.5k
views
updated 3 days ago by
ashotmarg2004
▴
130
•
written 21 months ago by
a615ebfb
▴
50
0
votes
1
reply
224
views
0
votes
0
replies
180
views
0
votes
2
replies
296
views
0
votes
0
replies
194
views
0
votes
0
replies
203
views
0
votes
0
replies
208
views
4 days ago by
zsc25001
▴
10
1
vote
6
replies
402
views
0
votes
0
replies
216
views
4 days ago by
Titus
▴
910
4
votes
3
replies
380
views
3 days ago by
rajdeepboral00
▴
70
0
votes
0
replies
203
views
1
vote
7
replies
478
views
updated 3 days ago by
GenoMax
151k
•
written 4 days ago by
SpliceAndScript
•
0
1
vote
1
reply
271
views
updated 4 days ago by
GenoMax
151k
•
written 4 days ago by
Arup Ghosh
3.3k
0
votes
2
replies
335
views
3 days ago by
Peter
•
0
0
votes
0
replies
241
views
2
votes
4
replies
424
views
0
votes
2
replies
325
views
1
vote
2
replies
347
views
4
votes
2
replies
335
views
0
votes
0
replies
252
views
0
votes
0
replies
231
views
0
votes
0
replies
230
views
5 days ago by
Begonia_pavonina
▴
210
6
votes
2
replies
342
views
5 days ago by
Mahdi&Christ
▴
20
4
votes
4
replies
463
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
South Korea, 6 minutes ago
Australia, 15 minutes ago
United States, 16 minutes ago
Canada, 20 minutes ago
UCLA, 46 minutes ago
United States, 1 hour ago
Recent Awards •
All
Popular Question to
Alex Reynolds
36k
Popular Question to
rajdeepboral00
▴
70
Popular Question to
Ram
45k
Popular Question to
andres.firrincieli
3.9k
Popular Question to
SeoG
•
0
Teacher to
Mensur Dlakic
★
29k
Recent Replies
Comment: Distribution of assayed SNPs per sample
by
am29
▴
60
The vcf file looks like this:
CHR BP SNP ID GENOTYPE SAMPLE ID
1 5234 1:5234 ./. SAMPLE_1
Comment: Distribution of assayed SNPs per sample
by
am29
▴
60
I am interested in whether the reason might not be that individuals are genotyped with different SNP chips but that genotype calls for geno…
Comment: How do I change the title font size in ViolinPlot (Seurat)
by
e.r.zakiev
▴
260
wow this ampersand hack is crazy, thank you! I've been in the R field since 2015 and didn't know this thing
Answer: open target platform SNP to Gene qurey
by
GenoMax
151k
Did you see this announcement:
> Open Targets Genetics has been superseded by the Open Targets Platform
> 25.03 release with updated g…
Answer: Which tools do you recommend me use to get the maximum information of a protein
by
fileyfood
▴
10
For modeling, check out the [AlphaFold Server][1] for predicting protein structure.
[1]: https://alphafoldserver.com/
Answer: Tools for predicting protein function?
by
fileyfood
▴
10
Have you read the [wikicrow entry][1] on the gene? Wikicrow is an LLM generated jumping off point, so while you should treat the informatio…
Answer: Map genome positions onto protein coordinates?
by
fileyfood
▴
10
You can use [ensemble VEP][1] to get the protein coding changes.
You can then use [the Genomics 2 Proteins portal][2] to map these changes…
Answer: Online tool for creating figures of gene with its features
by
fileyfood
▴
10
Yes, check out [the Genomics 2 Proteins portal.][1] The tool allow you to map any feature, including domains onto a protein structure and c…
Answer: Simple tools for creation of figures of gene and protein structure
by
fileyfood
▴
10
Yes, check out [the Genomics 2 Proteins portal][1]. The tool allow you to map any feature, including domains onto a protein structure and c…
Answer: To create amino acid substitution in protein structure
by
fileyfood
▴
10
For more intensive analysis, you can consider MD simulations of the mutant protein where you relax the structure after mutation using tools…
Answer: Where Can I Get The Secondary Structure Of A Protein?
by
fileyfood
▴
10
[UniProt][1] will show the secondary structure for areas of the protein with available SIFTS secondary structures (from PDBs). If there is …
Answer: Database Of Structurally Derived Protein Features
by
fileyfood
▴
10
A few databases that have protein structural features are [UniProt][1], [the RCSB PDB][2], and [the G2P portal][3]
Structural features fro…
Answer: Protein structure and snps
by
fileyfood
▴
10
There is a tradeoff between speed and information for a mutation:
(1) Fast, visual: tools like MutationMapper[enter link description here]…
Answer: Modelling Effect Of Mutation On Protein Structure
by
fileyfood
▴
10
For a quick visual analysis of how a mutation relates to or features in 3D, the [Genomics 2 Proteins portal][1] is designed for this purpos…
Answer: Comparison of protein structures
by
fileyfood
▴
10
You can start by visualizing protein structures in a variety of different tools, including offline tools like PyMOL (has an online version …
Traffic: 2537 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6