2
votes
6
replies
157
views
0
votes
1
reply
60
views
updated 2 hours ago by
Mensur Dlakic
★
29k
•
written 3 hours ago by
benjamin.kellman
•
0
0
votes
2
replies
106
views
0
votes
0
replies
64
views
10 hours ago by
Physalia-courses
★
2.6k
839
votes
170
replies
179k
views
112 follow
updated 6 weeks ago by
Biostar
3.6k
•
written 8.5 years ago by
Istvan Albert
102k
3
votes
0
replies
98
views
20 hours ago by
Ming Tommy Tang
★
4.6k
0
votes
1
reply
121
views
2
votes
1
reply
295
views
2
votes
1
reply
153
views
updated 1 day ago by
GenoMax
151k
•
written 1 day ago by
rajdeepboral00
▴
70
1
vote
0
replies
107
views
2
votes
4
replies
287
views
updated 1 day ago by
colindaven
7.6k
•
written 1 day ago by
sarahmanderni
▴
130
6
votes
2
replies
1.4k
views
updated 1 day ago by
ashotmarg2004
▴
130
•
written 21 months ago by
a615ebfb
▴
50
0
votes
1
reply
144
views
0
votes
0
replies
107
views
0
votes
2
replies
211
views
0
votes
0
replies
119
views
0
votes
0
replies
125
views
0
votes
0
replies
136
views
2 days ago by
zsc25001
▴
10
1
vote
6
replies
306
views
0
votes
0
replies
141
views
2 days ago by
Titus
▴
910
4
votes
3
replies
291
views
0
votes
0
replies
127
views
1
vote
7
replies
375
views
updated 1 day ago by
GenoMax
151k
•
written 2 days ago by
SpliceAndScript
•
0
1
vote
1
reply
195
views
updated 2 days ago by
GenoMax
151k
•
written 2 days ago by
Arup Ghosh
3.3k
0
votes
2
replies
253
views
1 day ago by
Peter
•
0
0
votes
0
replies
166
views
2
votes
4
replies
332
views
0
votes
2
replies
247
views
1
vote
2
replies
267
views
4
votes
2
replies
256
views
0
votes
0
replies
178
views
0
votes
0
replies
156
views
0
votes
0
replies
156
views
3 days ago by
Begonia_pavonina
▴
210
6
votes
2
replies
260
views
3 days ago by
Mahdi&Christ
▴
20
4
votes
4
replies
374
views
9
votes
9
replies
557
views
0
votes
1
reply
242
views
0
votes
1
reply
761
views
2
votes
10
replies
536
views
updated 2 days ago by
GenoMax
151k
•
written 3 days ago by
anthony.santana.703.j
▴
30
0
votes
0
replies
195
views
4 days ago by
Claire Watson
▴
60
1
vote
6
replies
382
views
4
votes
0
replies
221
views
2
votes
0
replies
196
views
2
votes
0
replies
212
views
2
votes
0
replies
217
views
0
votes
2
replies
257
views
2
votes
7
replies
486
views
updated 4 days ago by
GenoMax
151k
•
written 4 days ago by
ramiro.barrantes
▴
60
1
vote
1
reply
234
views
0
votes
1
reply
231
views
0
votes
1
reply
241
views
Recent Locations •
All
United States, 1 minute ago
France, 1 minute ago
Canada, 4 minutes ago
United Kingdom, 15 minutes ago
Berlin, 21 minutes ago
Mexico, 24 minutes ago
United Kingdom, 41 minutes ago
Recent Awards •
All
Popular Question to
Physalia-courses
★
2.6k
Popular Question to
lessismore
★
1.4k
Supporter to
marco.barr
▴
170
Popular Question to
SomeOne
▴
200
Popular Question to
Gabriel R.
★
2.9k
Popular Question to
am29
▴
60
Popular Question to
gynecoloji
•
0
Recent Replies
Comment: Distribution of assayed SNPs per sample
by
mbyvcm
▴
460
> According to my logic, one could do this by filtering out SNPs with missing genotype calls (./.), however when I did this, I ended up hav…
Answer: Different comparisons in RNASeq Analysis
by
mbyvcm
▴
460
For analysis 3, you could think about something like:
(Plant Mut vs. Plant WT) vs (Flask Mut vs. Flask WT)
In doing so you are internally…
Answer: Querying on non-canonical bacterial IDs
by
Mensur Dlakic
★
29k
I don't think there are any other records, including what you call canonical, for this protein.
Maybe this will help you, using [**Entrez …
Comment: Different comparisons in RNASeq Analysis
by
jkim
▴
190
See [the post](https://www.biostars.org/p/403053/#473727).
Comment: Different comparisons in RNASeq Analysis
by
SomeOne
▴
200
Hi. Thank you for replying.
If i trim the PE data to SE and at 75bp length, and perform the analysis.
Wouldn’t that effect the final co…
Comment: Different comparisons in RNASeq Analysis
by
SomeOne
▴
200
Hi! Thank you for your response.
Can you share some information on how to remove this batch effect ?
Answer: Different comparisons in RNASeq Analysis
by
swbarnes2
15k
> or the Different sequence-type (paired vs single), difference in
> read-length (150bp-x2 vs 75bp-x1) will have any technical or batch
…
Comment: Different comparisons in RNASeq Analysis
by
jkim
▴
190
For analyses 3 and 4, you will need to account for batch effects, which I expect to be substantial given the differences between datasets—e…
Comment: Distribution of assayed SNPs per sample
by
1769mkc
★
1.3k
if you can share some part of the data that would be helpful what you are trying and what the final output expected , that helps for people…
Comment: Trouble building combined pangenome graph with circularized genomes + embedded O
by
Jordan M Eizenga
▴
740
That error is caused by a simple failure to open that file (which is created in the `vg prune`). Usually, that results from a typo in the f…
Comment: SAIGE-GENE error
by
GenoMax
151k
Segfaults are related to memory, which is what part of the message is telling you. If you are running this job under a job scheduler make s…
Answer: IGV track display problem: interval rectangle from BED file appears above all tr
by
mcsimenc
▴
30
The problem was the filename suffix, it's meaningful in how IGV treats the file. It is .pk here, but changed to .bed and it works.
Comment: Y-axis break in Volcano Plot
by
GenoMax
151k
> Any help is appreciated
You should consider upvoting and validating (accepting, green check mark) comments/answers you have received on …
Comment: Isoform analysis after quantification with Salmon/Star
by
rajdeepboral00
▴
70
Thank you for your detailed reply
Answer: Nanopore data analysis
by
colindaven
7.6k
- Merge bams - yes. (why do you have so many ?). Merging fastqs before creating bams is easier (cat *.fastq.gz ) than bam merging.
- 150…
Traffic: 1995 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6