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Identify synonymous versus non synonymous variants
genome alignment written 4 minutes ago by julien.varaldi • 0
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11
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Finding mutational burden in TCGA dataset
genome python utr tcga cancer written 28 minutes ago by Jamie Watson • 0
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1
answer
110
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1
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Tool: SBGNview: Data Analysis, Integration and Visualization on 5000+ Pathways/3000+ Species
sbgn pathway analysis visualization pathview tool written 1 day ago by bigmawen • 380
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16
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Error in y - mu : non-numeric argument to binary operator - linear regression loop
R bulkrnaseq linear regression written 1 hour ago by camillab. • 40
4
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1
answer
32
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1
answer
Replace fasta Header witha a matching text
grep seqkit awk written 1 hour ago by Optimist • 160 • updated 1 hour ago by GenoMax ♦ 96k
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15
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rmsd graph equilibrium
md simulation rmsd written 1 hour ago by prinebula23 • 0
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34
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Error while running the transcript count file obtained using StringTie on DeSeq2
software error R sequencing written 1 hour ago by vedant23081998 • 0
2
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221
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Isoform detection of a gene using RNAseq
isoform_detection rna-seq written 5 weeks ago by vinishavvenugopal • 0
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11
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Normalization for WGCNA on two organisms (virus-host)
wgcna deseq2 rna-seq normalization written 1 hour ago by robert.buecking • 0
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ViewBS error in visualizing BSSeq data
software error analysis bisulfite sequencing written 1 hour ago by ab • 0 • updated 1 hour ago by GenoMax ♦ 96k
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19
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Extract features from fasta sequences
fasta machine-learning feature-extraction written 2 hours ago by suresh.wrc • 0
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Forum: Chip-Seq Data Analysis
forum chip-seq written 8.8 years ago by Raony Guimarães • 1.1k • updated 2 hours ago by prgrmmr70 • 0
6
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5
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6.9k
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5
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GO analysis- analyze upregulated and downregulated genes separately?
rna-seq written 5.5 years ago by ssukumaran • 20 • updated 2 hours ago by dariober ♦ 11k
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Job: Need Transcriptome bioinformatician's collaboration
next-gen job sequencing R alignment rna-seq written 2 hours ago by s.mojtabaghiasi • 0 • updated 2 hours ago by cpad0112 ♦ 15k
26
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3
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12k
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8 follow
3
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Renaming fasta headers according to a matching name list
sequence text-processing command-line written 5.0 years ago by san.san • 160 • updated 3 hours ago by Optimist • 160
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1
answer
78
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1
answer
Order a chromsome assembly with a chromosome assembly of a closely related species/
genome assembly written 3 days ago by cdjeu • 10 • updated 3 hours ago by lieven.sterck ♦ 10k
2
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1
answer
46
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1
answer
Deeptools plotHeatmap values
plotheatmap deeptools tables chip-seq written 8 hours ago by saha.shagnik • 0 • updated 3 hours ago by 2nelly • 260
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2
answers
146
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2
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GATK issue in running Mutect2
next-gen snp written 5 weeks ago by jyotsana18237 • 0 • updated 3 hours ago by 2nelly • 260
4
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2
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520
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7 follow
2
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Getting mitochondrial genes for scRNAseq
single-cell rna-seq scrnaseq written 7 months ago by m-harbus • 0 • updated 4 hours ago by charlesgwellem • 0
1
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879
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Correspondence between unlabeled/different tips of different phylogenetic trees
gene phylogenetics sequence trees written 3.0 years ago by rfm • 0 • updated 4 hours ago by Biostar ♦♦ 20
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1
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49
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1
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FASTQC: overrepresented sequences
rna-seq written 5 hours ago by kuilin • 0 • updated 5 hours ago by GenoMax ♦ 96k
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41
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error in anvi'o tool
software error python genome gene R written 10 hours ago by Kumar • 40
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24
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63k
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280 follow
24
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 4.2 years ago by Istvan Albert ♦♦ 86k • updated 5 hours ago by meriv41409 • 0
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24
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lncRNA-target reference file with proper gene nomenclature
genome gene lincrna file sequencing written 5 hours ago by Apex92 • 20
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41
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Forum: Discussion on effects of Gain-of-Function mutations
missense variants protein forum written 5 hours ago by German.M.Demidov • 1.9k • updated 5 hours ago by ATpoint ♦ 46k
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40
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Getting ENTREZ GENE IDs for data frame, any help?
gene R assembly written 6 hours ago by ymervenuryavuz • 0 • updated 5 hours ago by cpad0112 ♦ 15k
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40
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Regression - correcting for the same covariate with a different value twice
R regression age-correction written 6 hours ago by ika • 40
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33
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How to draw survival curve marked at one censoring time for each patient
R kaplan-meier survival written 12 hours ago by Apprentice • 50 • updated 7 hours ago by zx8754 ♦ 10.0k
1
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Plink1.07 generate ERRORs when reading covaries
plink snp written 8 hours ago by heqianchange • 0 • updated 7 hours ago by zx8754 ♦ 10.0k
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24
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cannot see variations on graph image
vg written 7 hours ago by philgev2 • 10
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