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bcl2fastq with xGen Dual Index UMI Adapters to produce 3 read and 2 index fastqs
rna-seq written 16 minutes ago by segrossk • 0
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How splice-aware aligner (RNA-Seq) deal with long gap (intron) penalty
hisat tophat alignment star rna-seq written 32 minutes ago by CY • 370
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Job: Looking a single-cell RNA-seq analysis PhD position /job
bioinformatics single-cell rna job written 13 days ago by Paragon • 0
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Novel lncRNA identification and quantification RNA seq?
sequencing assembly lncrna rna-seq hisat2 written 1 hour ago by mathavanbioinfo • 20
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Can the gtf file needed to run rMATS be a transcript assembled by cufflinks and cuffmerge?
rna-seq written 2 hours ago by yangshuaihz • 0
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Plot features on tsne plot with high pLi scores
pli genes tsne rna-seq seurat written 7 days ago by asmariyaz23 • 10 • updated 3 hours ago by Biostar ♦♦ 20
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93
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6 follow
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length of specific sequences from multi fasta file
sequence written 1 day ago by balathumma10 • 0
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1
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biomaRt and gprofiler not mapping rsid's that exist on ensembl site
enembl biomart gprofiler rsid map written 6 hours ago by bdarius85 • 0 • updated 5 hours ago by swbarnes2 ♦ 6.5k
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223 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.8 years ago by Istvan Albert ♦♦ 81k • updated 5 hours ago by dhanyasri • 0
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Need help with simple FOR loop
seurat rna-seq written 5 hours ago by cook.675 • 0 • updated 5 hours ago by swbarnes2 ♦ 6.5k
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148
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GUIDEseq data links dead in github
crispr github cas9 guideseq written 3 months ago by joe • 60
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107
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1
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convert ancestry.com text file to vcf
vcf ancestry.com ancestrydna convert written 1 day ago by LTDavid • 20
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Codis marker exact genomic coordinates
genome str codis written 8 hours ago by nmmsv • 0 • updated 7 hours ago by ATpoint ♦ 23k
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GATK Terra Best Practices pipeline for Mito Variant Calling
terra gatk wes variant calling written 8 hours ago by a.j.wilson0000 • 0
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Positions of variant in certain depth
variant sam written 9 hours ago by avichaireich • 0
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What does arrow+box mean in UCSC genome browser?
alignment written 2 days ago by Rashedul Islam • 320 • updated 9 hours ago by Luis Nassar • 130
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HISAT2 index building
hisat2 written 9 hours ago by nienke.besbrugge • 0
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Population Genetics from SNP data- no VCF
R snp population genetics written 16 days ago by vidyavuru • 0 • updated 9 hours ago by Biostar ♦♦ 20
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Job: Postdoctoral Fellowship - Aparicio Lab
genome bioinformatics job single cell written 9 hours ago by jmaanaki • 0
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56
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Looking for differential gene expression between treatment, within a specific cluster (seurat)
seurat written 11 hours ago by cook.675 • 0
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5 follow
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How to add significant cut off in manhattan plot
R written 3 days ago by Manoj • 30 • updated 10 hours ago by ATpoint ♦ 23k
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(Closed) How to add a cut off value in manhattan plot :
R written 11 hours ago by Manoj • 30 • updated 10 hours ago by ATpoint ♦ 23k
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6 follow
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removing duplicate sequences while extarcting the reads from fastq.gz
genome sequence sequencing written 19 hours ago by abdul.karim • 0 • updated 12 hours ago by swbarnes2 ♦ 6.5k
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A reliable tool to predict attenuators in bacterial genomes
bacteria soft attenuator written 17 hours ago by natasha.sernova • 3.6k • updated 12 hours ago by Mensur Dlakic • 1.2k
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52 follow
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Tutorial: Clustering of DAVID gene enrichment results from gene expression studies
enrichment tutorial gene ontology david clustering written 19 months ago by Kevin Blighe ♦ 48k
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concatenating FASTQ forward and reverse reads in Snakemake
reads fastq forward concatenate bash written 13 hours ago by Hansen_869 • 0 • updated 12 hours ago by Eric Lim • 1.4k
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RNA-seq on data that has two runs per (two `sra` files) sample
alignment rna-seq written 12 hours ago by Fawzi Yassine • 10
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News: Comparative Genomics course in October - last 2 places left
illumina news next-gen pacbio nanopore written 12 hours ago by carlopecoraro2 • 1.2k
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Homologs finding for mirna of Cancer
homologs written 14 hours ago by sg927357 • 0
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News: UniProt: Change of annotation topic 'Interaction'
xml news format interaction uniprot written 13 hours ago by Elisabeth Gasteiger • 1.6k
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