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Phylogenetic distance and differences in microbiome
next-gen written 10 minutes ago by arturo.marin • 0
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86
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How to interpret the output of gatk?
gatk vcf2maf mutect2 written 3 days ago by Laven9 • 0 • updated 13 minutes ago by zephyr_falcon • 40
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Somatic mutations per gene
gene R vcf mutect2 somatic mutation written 30 minutes ago by zephyr_falcon • 40
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1
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48
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GEO differential expression analysis
geo R deg written 11 hours ago by yehchan57 • 0 • updated 1 hour ago by zephyr_falcon • 40
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use `plink --rel-cutoff` to remove related samples
plink written 1 hour ago by blueskypie • 40
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Retrieve PTM (protein post translational modifications) for a list of protein coordinates (specific exons)
ptm splicing proteins written 1 hour ago by Lalla • 40
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Relapse vs gene expression figure
figure written 2 hours ago by kanwarjag • 960
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Multiple Sequence Alignment for >20 Sequences
sequence alignment written 2 hours ago by griffinwhy • 0
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7 follow
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(Online) Courses In System Biology
written 6.2 years ago by Dataminer • 2.6k • updated 2 hours ago by carlarichi3344 • 0
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23
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Alignment algorithm for unordered blocks or domains
alignment written 2 hours ago by tonygoering • 0
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66
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Tutorial RNASEQ problem again!
R rna-seq written 3 hours ago by psschlogl • 0 • updated 3 hours ago by RamRS ♦ 22k
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what is the fastest way to extract reads of a specific barcode from a fastq
illumina fastq next-gen bcl2fastq demultiplexing written 3 hours ago by b10hazard • 20
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214 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.5 years ago by Istvan Albert ♦♦ 80k • updated 3 hours ago by Cookie-san • 0
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Relevance of RNAseq meta-analysis
rna-seq differential expression written 8 hours ago by guillaume.rbt • 590 • updated 3 hours ago by Asaf ♦ 5.7k
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What does my error message (Autodock vina ligand error) mean ?
software error written 19 hours ago by akansha.gitanjali • 0 • updated 3 hours ago by pq0ky • 0
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paired-end fastq file
sequencing written 4 hours ago by evelyn • 30
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41
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Using samtools to view an indexed file in a private S3 bucket
samtools amazon-s3 written 4 hours ago by Brynjar • 0
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24
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Looking for Yeast transcription factor - target gene matrix with weights (activations, correlations, ...)
database transcription factors yeast written 4 hours ago by Andrei Kucharavy • 10
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26
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MACS2 result of FDR
false discovery rate macs2 chip-seq q-value written 4 hours ago by chaudharyc61 • 0 • updated 4 hours ago by genomax ♦ 68k
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Help! Obtaining consensus sequence from Aligned BAM file
assembly tutorial written 4 hours ago by liamwhitmore22 • 0
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82
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1
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How to edit signalp program like git hub ?
software error gene next-gen rna-seq alignment written 13 hours ago by scheme4193 • 0 • updated 4 hours ago by colindaven • 1.3k
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How To Visualize Network Comparatively Via Cytoscape Or Other Tools
network cytoscape written 6.6 years ago by maddy • 20 • updated 5 hours ago by Biostar ♦♦ 20
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Filtering for Percentage of identity matches (sequence identity: pident, %) from tblastn results
sequence pident blast filtering tblastn written 10 hours ago by endretoth • 0
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MarkDuplicates output file in GATK pipeline
gatk alignment bam rna-seq sequencing written 7 hours ago by gprashant17 • 50 • updated 7 hours ago by Pierre Lindenbaum ♦ 120k
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Protege Ontology - annotations and entities missing
protege written 9 hours ago by priyas772 • 0
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90
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How to subset a set of variations from a VCF on specific chromosome and between 2 postions?
vcf subset awk bash written 8 days ago by Defne • 0
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Bootstrap & p distance distribution
phylogenetic tree msa sequencing written 20 months ago by a.alsayed.phd • 10 • updated 8 hours ago by hewm2008 • 20
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Integration of microarray and RNA-seq data for machine learning model??
microarrays rna-seq machine learning written 8 hours ago by Mohamed Omar • 10
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34
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Bowtie database of all bacterial and fungal complete genomes
bowtie2 metagenomics mapping shotgun written 8 hours ago by c.e.chong • 10
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News: Course: Speciation Genomics in Canada - Quebec City, 2-6 September 2019
R news next-gen snp written 8 hours ago by info • 40
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