updated just now by
Vincent Laufer
★
2.8k
•
written 7 hours ago by
en_keser
•
0
0
votes
1
reply
52
views
0
votes
0
replies
15
views
0
votes
0
replies
22
views
0
votes
3
replies
61
views
0
votes
0
replies
36
views
3 hours ago by
fifty_fifty
▴
40
0
votes
0
replies
33
views
3 hours ago by
Maddie
•
0
0
votes
0
replies
28
views
3 hours ago by
rheab1230
▴
140
1
vote
4
replies
100
views
0
votes
1
reply
86
views
0
votes
0
replies
54
views
0
votes
0
replies
29
views
4 hours ago by
oksana03fel
•
0
1
vote
0
replies
50
views
1
vote
3
replies
180
views
updated 4 hours ago by
Vincent Laufer
★
2.8k
•
written 9 hours ago by
John Erik
•
0
3
votes
2
replies
85
views
updated 3 hours ago by
Ram
39k
•
written 7 hours ago by
e.r.zakiev
▴
50
0
votes
2
replies
94
views
updated 4 hours ago by
rpolicastro
12k
•
written 7 hours ago by
Pac314
▴
10
0
votes
1
reply
63
views
0
votes
1
reply
83
views
0
votes
1
reply
61
views
updated 7 hours ago by
Raony Guimarães
★
1.2k
•
written 7 hours ago by
survive
•
0
0
votes
1
reply
67
views
updated 7 hours ago by
GenoMax
129k
•
written 8 hours ago by
hashim.rana11
•
0
2
votes
1
reply
109
views
updated 8 hours ago by
ATpoint
72k
•
written 12 hours ago by
friguiahlem8
▴
10
0
votes
2
replies
76
views
updated 8 hours ago by
rpolicastro
12k
•
written 10 hours ago by
smanzano250800
•
0
13
votes
25
replies
3.0k
views
7 follow
0
votes
23
replies
317
views
0
votes
0
replies
62
views
0
votes
1
reply
67
views
3
votes
3
replies
123
views
updated 7 hours ago by
andres.firrincieli
3.3k
•
written 11 hours ago by
Sebastian Hesse
▴
320
1
vote
7
replies
185
views
updated 6 hours ago by
ATpoint
72k
•
written 12 hours ago by
eesha28112001
•
0
2
votes
3
replies
121
views
1
vote
4
replies
134
views
0
votes
1
reply
111
views
5
votes
4
replies
145
views
0
votes
2
replies
209
views
13 hours ago by
Maurice
•
0
0
votes
1
reply
71
views
updated 7 hours ago by
Ram
39k
•
written 13 hours ago by
rhonddaskl
•
0
0
votes
0
replies
51
views
13 hours ago by
aziznasr1920
•
0
0
votes
1
reply
78
views
updated 12 hours ago by
Pierre Lindenbaum
154k
•
written 13 hours ago by
herh
•
0
0
votes
0
replies
49
views
6
votes
25
replies
29k
views
14 follow
updated 15 hours ago by
13554221497
•
0
•
written 5.2 years ago by
ARich
▴
130
160
votes
63
replies
76k
views
38 follow
4
votes
5
replies
13k
views
0
votes
2
replies
128
views
Forum:
Colleges
updated 7 hours ago by
Ram
39k
•
written 16 hours ago by
mahimanepalli36
•
0
2
votes
5
replies
202
views
updated 7 hours ago by
Ram
39k
•
written 19 hours ago by
Hau Tak Leighton
•
0
0
votes
7
replies
311
views
0
votes
0
replies
71
views
8
votes
5
replies
308
views
7 hours ago by
gh
•
0
0
votes
7
replies
521
views
updated 19 hours ago by
Vincent Laufer
★
2.8k
•
written 4 days ago by
Camilo Andres
▴
30
0
votes
3
replies
172
views
0
votes
3
replies
165
views
updated 7 hours ago by
andres.firrincieli
3.3k
•
written 1 day ago by
kamanovae
▴
80
0
votes
2
replies
135
views
updated 15 hours ago by
WouterDeCoster
47k
•
written 1 day ago by
Mohd
•
0
0
votes
2
replies
136
views
updated 12 hours ago by
ATpoint
72k
•
written 1 day ago by
Mohammad Amin
•
0
1
vote
2
replies
177
views
Recent Votes
Recent Locations •
All
United States, 4 minutes ago
United States, 4 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 6 minutes ago
United States, 8 minutes ago
United Kingdom, 14 minutes ago
United States, 17 minutes ago
Bologna, 20 minutes ago
Recent Awards •
All
Popular Question to
Sara
▴
220
Teacher to
Mensur Dlakic
★
23k
Popular Question to
yaghoub.amraei
▴
10
Popular Question to
amy__
▴
50
Popular Question to
fr
▴
200
Recent Replies
Comment: Problem with PGDSpider v 2.1.0.2
by
sackettl
▴
20
I have this same problem with version 2.1.1.5. Did you ever find a solution?
Comment: Filter VCF file for variant alleles
by
Ram
39k
> can't find anything to do this
It's in there. If you had looked a little deeper, you would have found - on your own - exactly what Pierr…
Comment: To call variants can I use my aligned WGS data as a reference genome
by
GenoMax
129k
Then create an alternate Reference with data for the sample: https://gatk.broadinstitute.org/hc/en-us/articles/360037594571-FastaAlternateR…
Comment: Help making ADMIXTURE output digestible
by
Aaron
▴
10
You can also check out [pong][1] (README [here][2]), which creates interactive plots with the clusters and colors automatically aligned acr…
Comment: To call variants can I use my aligned WGS data as a reference genome
by
mls
•
0
Yes they are but I wanna compare one of my samples with others , rather S288C.
Comment: To call variants can I use my aligned WGS data as a reference genome
by
Pierre Lindenbaum
154k
the bam are mapped on S288C fasta isn't it ? why would you need another reference ?
Comment: Filter VCF file for variant alleles
by
Pierre Lindenbaum
154k
use a filtering expression https://samtools.github.io/bcftools/bcftools.html#expressions , something like;
bcftools view -i 'COUNT(GT=…
Comment: Filter VCF file for variant alleles
by
miguellarrazlopezdenovales
•
0
I've tried bcftools, which seems to be the closest I've got, but I can't find anything to do this. I have also found vcftools --max-non-ref…
Comment: Filter VCF file for variant alleles
by
Ram
39k
What have you tried? You've mentioned bcftools as a tag, have you read the manual?
Comment: How to concatenate multiple fasta file
by
doggie
•
0
@shenwei356 Thank you so much! Your prompt reply helped me a lot!
Answer: PacBio Pipeline and Tools for Variant Call
by
William Rowell
▴
250
> What are Quality parameters that should be taken care ( Adapter trim, Reads filter, Min Data size, ) How to trim adapter, What tools to u…
Comment: Ambient RNA expression correction
by
rpolicastro
12k
Ambient RNA would have the same cell barcode as a valid cell-containing droplet since the RNA gets partitioned into the droplet with the ce…
Comment: Can any one suggest tools that generate "mind-maps" on concepts in biology/biote
by
Vincent Laufer
★
2.8k
sorry to be blunt but this question is so broad i worry it may not evoke a cogent answer.
you might start by finding a review on the use …
Answer: Can any one suggest tools that generate "mind-maps" on concepts in biology/biote
by
Jesse
▴
550
Haven't used it, but I've heard good things about [Obsidian](https://obsidian.md/) as a note-taking tool, and it has [graphing features](ht…
Comment: How to concatenate multiple fasta file
by
shenwei356
8.1k
Another common way:
1. Split by isolates
$ seqkit split --id-regexp "^(.+)_[\w\.]+:.+" --by-id-prefix "" -i merged.fa -O tmp --f…
Traffic: 1801 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6