updated just now by
Mensur Dlakic
★
27k
•
written 54 minutes ago by
mbrav005
•
0
0
votes
1
reply
13
views
0
votes
0
replies
24
views
0
votes
1
reply
59
views
updated 2 hours ago by
Mensur Dlakic
★
27k
•
written 3 hours ago by
MarcosCosta
•
0
2
votes
2
replies
95
views
1 hour ago by
dlera.lozano
▴
10
1
vote
3
replies
113
views
0
votes
1
reply
95
views
updated 4 hours ago by
jared.andrews07
★
16k
•
written 5 hours ago by
jen
▴
10
0
votes
1
reply
94
views
0
votes
3
replies
173
views
0
votes
1
reply
86
views
updated 7 hours ago by
LauferVA
4.2k
•
written 8 hours ago by
graeme.thorn
▴
100
0
votes
1
reply
83
views
0
votes
0
replies
64
views
8 hours ago by
ramiro.barrantes
•
0
4
votes
1
reply
154
views
10 hours ago by
J.
▴
40
0
votes
0
replies
61
views
10 hours ago by
jennyp0706
•
0
0
votes
3
replies
162
views
1
vote
1
reply
95
views
updated 6 hours ago by
Ram
43k
•
written 11 hours ago by
kilcdincer
▴
10
0
votes
0
replies
53
views
4
votes
4
replies
2.9k
views
0
votes
6
replies
275
views
8 hours ago by
ntsopoul
▴
60
0
votes
3
replies
157
views
0
votes
1
reply
129
views
1
vote
1
reply
119
views
0
votes
1
reply
99
views
1
vote
1
reply
145
views
0
votes
0
replies
65
views
0
votes
2
replies
134
views
0
votes
3
replies
304
views
updated 19 hours ago by
Wei-Chen Pan
•
0
•
written 9 weeks ago by
Matvii Mykhailichenko
•
0
0
votes
0
replies
88
views
2
votes
5
replies
221
views
updated 21 hours ago by
Philipp Bayer
8.5k
•
written 1 day ago by
林明德
•
0
0
votes
4
replies
2.3k
views
updated 3 hours ago by
Ram
43k
•
written 13 months ago by
mohyeddine.taleb
•
0
0
votes
1
reply
110
views
2
votes
4
replies
173
views
0
votes
1
reply
132
views
0
votes
1
reply
133
views
updated 1 day ago by
GenoMax
142k
•
written 1 day ago by
cedric.blais
•
0
0
votes
2
replies
397
views
0
votes
1
reply
120
views
1
vote
5
replies
426
views
1
vote
3
replies
350
views
1
vote
2
replies
236
views
14 hours ago by
Lukas
•
0
1
vote
2
replies
147
views
0
votes
0
replies
86
views
1
vote
2
replies
184
views
2
votes
0
replies
118
views
0
votes
1
reply
118
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
kilcdincer
▴
10
0
votes
4
replies
219
views
0
votes
0
replies
86
views
0
votes
1
reply
136
views
1
vote
3
replies
226
views
0
votes
1
reply
143
views
0
votes
3
replies
168
views
3
votes
2
replies
255
views
17 hours ago by
analyst
▴
50
Recent Votes
Recent Locations •
All
Canada, 1 minute ago
College Station, TX, 2 minutes ago
USA, 11 minutes ago
Mexico, 15 minutes ago
Brazil, 22 minutes ago
United States, 24 minutes ago
United States, 25 minutes ago
Recent Awards •
All
Popular Question to
mbrav005
•
0
Popular Question to
Sofia
•
0
Popular Question to
jen
▴
10
Popular Question to
nitinra
▴
50
Scholar to
Pierre Lindenbaum
161k
Popular Question to
bioinfo
▴
150
Recent Replies
Answer: Doubt about the process of annotation, detection, identification and classificat
by
Mensur Dlakic
★
27k
Depends on the context. `TE detection` and `TE identification` could mean the same thing if they refer to presence/absence of TEs. `TE iden…
Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
by
Ram
43k
Please accept your own answer to mark the post as solved.
Comment: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Ram
43k
A small educational note: if an answer was helpful, you should upvote it; if the answer resolved your question, you should mark it as accep…
Comment: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Prawesh
•
0
thanks, it's working now.
Comment: Genome Visualization Tools
by
GenoMax
142k
@cmdcolin has a great list here: https://github.com/cmdcolin/awesome-genome-visualization
Answer: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Trivas
★
1.8k
You need to have indexed your bam/sam file using `samtools index`
Answer: Using ggplotly in R
by
jared.andrews07
★
16k
The simple answer is to plot it natively with plotly rather than use `ggplotly`. See [this stackoverflow answer](https://stackoverflow.com/…
Comment: Why does assigning genes with biomart give me different values than using a tran
by
GenoMax
142k
According to HUGO there is only one [**ZSCAN2 gene**][1] and it points to the first Ensembl gene ID (ENSG00000176371). Ensembl is annotatin…
Answer: RNAseq RNA content
by
noodle
▴
580
There are many tools for this. I recommend [gatk (picard) CollectRnaSeqMetrics][1] or alternatively [RSeQC][2]
and then run [multiqc][3…
Comment: Where to get the following bed file?
by
wyuan37
•
0
Hi, I emailed them and did get the bed file! Thank you so much.
Answer: Post-imputation QC for input into GWAS analyses
by
LauferVA
4.2k
1. Imputation algorithms will output log files indicating, among other things, accuracy of imputation. We can't comment on specifics as we …
Comment: Using Cutadapt to trim adapters from paired-end small RNA sequence data
by
GenoMax
142k
You can simply ignore read 2. It is not adding any information since your small RNA's are going to be small and were completely sequenced b…
Comment: Overlapping Ranges within Granges object
by
ntsopoul
▴
60
does this work with a single .bed file?
Traffic: 1757 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6