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906 results • Page 5 of 19
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News: Course: Practical GWAS Using Linux and R
next-gen R SNP
updated 11 months ago by 43k • written 7.0 years ago by ★ 2.5k
1
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2
replies
1.7k
views
News: Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
scRNAseq webinar rna-seq single-cell
updated 11 months ago by 43k • written 5.0 years ago by ▴ 580
1
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0
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986
views
News: NCBI Webinar: New Variation Services for Normalizing, Remapping, and Annotating Variants
Variation dbsnp API SPDI Clinvar
updated 11 months ago by 43k • written 5.3 years ago by ▴ 70
1
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0
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720
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News: Training - Data visualization in R with ggplot2
R Dataviz ggplot2
updated 10 months ago by 43k • written 3.7 years ago by ★ 2.5k
1
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3
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1.2k
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News: 4th Berlin Summer School in NGS Data Analysis - October 5-9, 2020
NGS RNA-Seq DNA-Seq
updated 11 months ago by 43k • written 4.2 years ago by 11k
1
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0
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439
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News: Good bioinformatics training resources
NGS
updated 11 months ago by 161k • written 11 months ago by ▴ 80
1
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0
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858
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News: hackseqRNA: Computational RNA hackathon, Vancouver BC
hackathon RNA
updated 11 months ago by 43k • written 4.2 years ago by ▴ 50
1
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0
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2.2k
views
News: WORKSHOP - Data visualisation and manipulation using Python
RNA-Seq Data-visualisation next-gen gene python
updated 12 months ago by 43k • written 7.2 years ago by ▴ 110
1
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2
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1.1k
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News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
1 day ago by Zhenyu Zhang ★ 1.2k
1
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0
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708
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News: Bioinformatics for Precision Oncology 2020 Program
cancer-biology RNA-Seq cancer
updated 11 months ago by 43k • written 4.3 years ago by ▴ 10
1
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0
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422
views
News: Spatial Omics course
Spatial-Omics Multiplexed-Image-Analysis
updated 7 months ago by 43k • written 8 months ago by ★ 2.5k
1
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0
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951
views
News: Paperkast.com - paper discussion and sharing
website
updated 11 months ago by 43k • written 5.7 years ago by ▴ 30
1
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0
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328
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News: Course - Developing R/Bioconductor Packages for Genomics
R package-development Genomics Bioconductor
updated 6 months ago by 43k • written 6 months ago by ★ 2.5k
1
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2
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1.7k
views
News: Workshop: Data analysis in high throughput biology. deadline today (2 places left)
next-gen R RNA-Seq
updated 12 months ago by 43k • written 7.1 years ago by ★ 2.5k
1
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0
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323
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News: course - Advanced Python Programming
Python-Programming
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
1
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2
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1.0k
views
News: Sage Bionetworks is seeking researchers and data scientists to participate in software user research!
research software
updated 11 months ago by 43k • written 5.2 years ago by ▴ 30
1
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0
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1.1k
views
News: Gene Ontology Official Workshop - Montreal, October 16, 2018
go ontology gene-ontology genomics
updated 11 months ago by 43k • written 5.6 years ago by • 0
1
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0
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415
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News: Online Training - Bioinformatics Pipeline Development with Nextflow (November 15-17, 2023)
nextflow automation pipeline development
7 months ago by David Langenberger 11k
1
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0
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917
views
News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
Assembly training RNA-Seq
updated 11 months ago by 43k • written 5.7 years ago by ▴ 140
1
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0
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1.3k
views
News: Population Genomics course online
R SNP next-gen
updated 11 months ago by 43k • written 4.1 years ago by ★ 2.5k
1
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1
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1.7k
views
News: Bioinformatics for Beginners @NIH, (Bethesda, MD, USA) Feb 13 - 16, 2018
beginners training
updated 11 months ago by 43k • written 6.5 years ago by ▴ 140
1
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0
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1.4k
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News: Metagenomics course. 9-13 April 2018
omics Metatranscriptomics metagenomics
updated 11 months ago by 43k • written 6.2 years ago by ★ 2.5k
1
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0
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1.0k
views
News: BBSRC (UK funding body) Review of data intensive biology in the UK
questionnaire UK
updated 11 months ago by 43k • written 4.9 years ago by 19k
1
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0
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1.4k
views
News: Advanced Sequencing Technologies & Bioinformatics Analysis Course at CSHL: November 3 - 15, 2020
course sequencing workshop
updated 11 months ago by 43k • written 4.3 years ago by 20k
1
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0
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2.2k
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News: UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
swiss-prot uniprot taxonomy fasta
updated 11 months ago by 43k • written 6.4 years ago by ★ 2.4k
1
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0
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623
views
News: Calling Data Scientists and Bioinformaticians for the NHLBI Big Data Challenge Competition
Big-Data Challenge Competition
updated 11 months ago by 43k • written 4.2 years ago by ▴ 10
1
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0
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1.1k
views
News: Course: Rstats for biologists in Berlin (LAST CALL)
R statistics biologists
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
1
vote
1
reply
211
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 8 weeks ago by 43k • written 8 weeks ago by • 0
1
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0
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437
views
Spam: Research Training in Next-Generation Sequencing Data Analysis.
RNA-Seq ChIP-Seq
updated 10 months ago by 43k • written 3.7 years ago by 10
1
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0
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186
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News: Landscape Genomics course in Switzerland
LFMM Landscape-Genomics Sambada R Local-Adaptation
3 days ago by carlopecoraro2 ★ 2.5k
1
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0
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897
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News: 7th Annual Mendelian Data Analysis Workshop - Learn bioinformatic tools for analysis of exome and genome sequence data for rare diseases.
sequence genome next-gen analysis
updated 11 months ago by 43k • written 5.2 years ago by ▴ 10
1
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1
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944
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News: Webinar on Extensive Assessment of Gene Fusion Detection, Prioritization, Annotation and Characterization on 11 March 2020
detection webinar RNA-Seq gene-fusion
updated 11 months ago by 43k • written 4.2 years ago by ▴ 40
1
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1
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1.7k
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News: 2nd Berlin Summer School in NGS Data Analysis 2018
DNA-Seq Workshop NGS RNA-Seq
updated 11 months ago by 43k • written 6.1 years ago by 11k
1
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0
replies
198
views
News: Cellosaurus release 48 is available
cell-line biocuration cellosaurus knowledgebase
3 months ago by Amos Bairoch ▴ 120
1
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0
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739
views
News: Course: Speciation Genomics in Canada - Quebec City, 2-6 September 2019
snp R next-gen
updated 11 months ago by 43k • written 4.9 years ago by ▴ 40
1
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0
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834
views
News: Utrecht Bioinformatics Center: online seminars
DNA-damage Utrecht epigenomics
updated 11 months ago by 43k • written 3.9 years ago by ▴ 230
1
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0
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861
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News: UniProt: Changes to Proteomes
uniprot proteome
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
1
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0
replies
509
views
News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
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0
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697
views
News: SNAKEMAKE course in Berlin. Last places available
Python
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
1
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2
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2.4k
views
News: Workshop: Metagenomics, Metatranscriptomics, and multi'omics for microbial community studies (9-13 April 2018 in Berlin)
Metatranscriptomics Metagenomics
updated 11 months ago by 43k • written 6.2 years ago by ★ 2.5k
1
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4
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2.0k
views
News: webserver of TCGA data www.tcgaportal.org
genome RNA-Seq TCGA gene
updated 11 months ago by 43k • written 5.9 years ago by ▴ 40
1
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0
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749
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News: Check out precision FDA's Featured Expert Blog from Dr. Charles Eaton
biomarker Dupytrens genetic crowd-sourcing
updated 11 months ago by 43k • written 5.2 years ago by ▴ 60
1
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0
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999
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News: Genomic Data Visualization using R
R
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
1
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0
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1.6k
views
News: Machine Learning and Visualization of High-Throughput Biomedical Data
next-gen-sequencing gene
updated 11 months ago by 43k • written 5.9 years ago by ▴ 10
1
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0
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2.3k
views
News: Multivariate analysis of ecological communities in R with the VEGAN package (VGNR01)
R
updated 11 months ago by 43k • written 6.1 years ago by ▴ 60
1
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2
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1.7k
views
News: NCBI Datasets - try it out!
Assembly refseq genome ncbi
updated 11 months ago by 43k • written 4.1 years ago by ★ 3.7k
1
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0
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1.1k
views
News: DataTech19 submission deadline and keynotes: Jared Lander, Mine Cetinkaya-Rundel, Debbie Bard
R data-science HPC python conference
updated 11 months ago by 43k • written 5.5 years ago by ▴ 20
1
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0
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1.3k
views
News: Pan-Structural Variation hackathon in the Cloud (Remote hackathon)
structural-variants sequencing
updated 10 months ago by 43k • written 3.7 years ago by 9.7k
1
vote
2
replies
1.8k
views
News: Course: Applied Statistics and Bioinformatics with R and Bioconductor
Statistics R Metagenomics Bioconductor
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
1
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0
replies
208
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News: Online course - Introduction to Machine Learning in R for omics data
R Omics MachineLearning StatisticalLearning
3 months ago by carlopecoraro2 ★ 2.5k
906 results • Page 5 of 19
Recent Votes
Answer: ERROR When Using Ensembl Plants Biomart Wget API
Answer: Should I remove these cells? (scRNA 10x 5')
Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
A: Fold change - a final explanation
Answer: sc/snRNASeq using cell ranger parameters
mitochondria in single nuclear RNAseq
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Popular Question to njornet ▴ 20
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Recent Replies
Comment: install.packages("imudata") by zx8754 11k
[How should I deal with "package 'xxx' is not available (for R version x.y.z)" warning?](https://stackoverflow.com/q/25721884/680068)
Answer: install.packages("imudata") by ATpoint 82k
Welcome to this community. Please learn the most important lesson right away which is reading answers and learning from it. Users gave you …
Comment: install.packages("imudata") by marco.barr ▴ 90
You can install from github directly. Many R packages are not present in the CRAN repository or in Bioconductor( from Biocmanager). Also re…
Comment: install package by snajafy • 0
Hi, Thanks for your answer, I do it, but I get this error: ERROR: compilation failed for package 'gmwm' removing 'C:/Users/najafi/AppData/…
Comment: Quetion regarding WGCNA by andres.firrincieli 3.6k
There is something wrong with your data but without any context I can't really answer to your question. I would like to see a PCA plot of …
Comment: error to run rnammer by antonio.spl • 0
please could you tell me what was the solution, I am having the same problem, I only get empty files.
Comment: install package by snajafy • 0
Hi, Thanks for your answer, I do it, but I get this error: ERROR: compilation failed for package 'gmwm' * removing 'C:/Users/najafi/AppData…
Answer: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t by swbarnes2 14k
Any chance the numerical columns were imported as factors?
Comment: ERROR When Using Ensembl Plants Biomart Wget API by Dora ▴ 10
Thank you very much, that works perfectly :) ! Maybe someone needs to use a plant dataset as an example (instead of human dataset ) in the …
Comment: Truncated Bam Error by guanghao • 0
I also have this problem, but it doesn't work even I remove the Xms32g. The result bam is still malformed.
Answer: DMRcate ranges liftover hg19 to hg38 by aaron.stevens • 0
Hey, I believe they are mapped to hg19 and this is potentially a bigger problem than people realise, I nearly made this mistake and I would…
Comment: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB by brandon • 0
This worked beautifully using 'requests.get()' in python, thank you so much!
Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB by Pierre Lindenbaum 161k
first get the main ID in stringdb: $ wget -qO - "https://string-db.org/api/tsv-no-header/get_string_ids?identifiers=RPS4Y1&species=960…
Comment: Help with DGEList function by marco.barr ▴ 90
Are you sure you've loaded the library properly? Have you checked if edgeR is ticked in the list of installed packages? Double-check it. If…
Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t by mropri ▴ 150
Hi, I just wanted to update that IEGscore and PCNAscore were linearly dependent (or linear combinations of each other). I tested this using…
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