Limit : this year
all time today this week this month this year
1,000 results • Page 5 of 20
Sort: Votes
Rank Views Votes Replies
4
votes
3
replies
632
views
News: You may need to cleanup duplicate NCBI BLAST nt database volumes on your system
databases NCBI BLAST
4 weeks ago by PeterC_NCBI ▴ 330
4
votes
0
replies
1.5k
views
News: $650M gift to Broad seeks to propel (Genomics based ) psychiatric research
sequencing
updated 6 months ago by 40k • written 9.2 years ago by ★ 5.2k
4
votes
1
reply
1.7k
views
News: scRNA-seq data analysis Workshop in Berlin
RNA-Seq next-gen
updated 4 months ago by 40k • written 4.9 years ago by ★ 2.3k
4
votes
0
replies
1.7k
views
News: Call for Abstracts for the 18th Annual Bioinformatics Open Source Conference (BOSC 2017)
BOSC OBF
updated 5 months ago by 40k • written 6.6 years ago by ★ 2.2k
4
votes
1
reply
2.0k
views
News: Mark2Cure launches tool to help crowd-source curation of the biomedical literature
crowd-sourcing
updated 9 months ago by 40k • written 8.7 years ago by 20k
4
votes
0
replies
1.3k
views
News: ONLINE course - Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
next-gen-sequencing
updated 3 months ago by 40k • written 3.5 years ago by ★ 2.3k
4
votes
0
replies
2.3k
views
News: Upcoming Workshop: Ensembl Perl APIs
ensembl APIs Perl workshops
updated 6 months ago by 40k • written 8.9 years ago by ★ 5.2k
4
votes
1
reply
1.7k
views
News: Bioinformatics Contest 2018
contest
updated 4 months ago by 40k • written 5.7 years ago by ▴ 40
4
votes
1
reply
1.1k
views
News: Bioinformatics Workflows with Nextflow
Netflow reproducibility Workflows
updated 3 months ago by 40k • written 3.8 years ago by ★ 2.3k
3
votes
0
replies
1.6k
views
News: Ensembl in the Google Summer of Code 2016
ensembl GSOC Google
updated 5 months ago by 40k • written 7.6 years ago by 23k
3
votes
3
replies
2.2k
views
News: Innocentive Challenge: Identify Organisms From A Stream Of Dna Sequences And Get $1,000,000
ngs
updated 7 months ago by 40k • written 10.4 years ago by ▴ 830
3
votes
0
replies
1.5k
views
News: New web BLAST default parameters and search limits are now in place at NCBI
www-blast blast ncbi
updated 3 months ago by 40k • written 3.3 years ago by 134k
3
votes
0
replies
2.9k
views
News: Introduction to Python for Biologists and Advanced Python for Biologists courses
Python
updated 8 months ago by 40k • written 8.3 years ago by ★ 3.7k
3
votes
2
replies
3.6k
views
News: Course/Workshop: Informatics For Rna-Sequence Analysis (June, 2013)
RNA-seq
updated 7 months ago by 40k • written 10.7 years ago by 20k
3
votes
0
replies
952
views
News: Online training - Unix and shell scripting for bioinformatics
Linux scripting Unix
updated 7 months ago by 40k • written 2.7 years ago by ★ 2.3k
3
votes
0
replies
692
views
News: ::FINAL CALL:: NGS Data Analysis for Beginners - 11-13 December 2019 in Munich, Germany (2 seats left)
NGS Workshop
updated 3 months ago by 40k • written 3.9 years ago by 10k
3
votes
0
replies
1.1k
views
News: Nextflow Training Course
Pipeline Workflow NEXTFLOW
updated 3 months ago by 40k • written 4.0 years ago by ★ 2.3k
3
votes
0
replies
2.0k
views
News: Big Data in Healthcare Symposium, Luxembourg, 28/29 October 2015
big-data conference medicine health
updated 12 months ago by 40k • written 8.1 years ago by ▴ 130
3
votes
0
replies
1.8k
views
News: Deep learning in GATK4
GATK4 deep-learning GATK
updated 4 months ago by 40k • written 5.8 years ago by ★ 1.2k
3
votes
0
replies
1.1k
views
News: Changes to the default NCBI BLAST nucleotide database (nt). Learn more and provide feedback!
NCBI Databases BLAST
10 months ago by PeterC_NCBI ▴ 330
3
votes
2
replies
2.5k
views
News: Samtools/htslib v1.2 released
htslib samtools bcftools
updated 6 months ago by 40k • written 8.6 years ago by 103k
3
votes
0
replies
712
views
News: Phylogenomics course in Berlin
snp R next-gen
updated 3 months ago by 40k • written 3.8 years ago by ★ 2.3k
3
votes
0
replies
632
views
News: Testing and feedback of upcoming salmon release
salmon RNA-Seq
updated 3 months ago by 40k • written 4.0 years ago by 6.2k
3
votes
0
replies
1.8k
views
News: Dnanexus Is Giving Away 1 Free Agbt 4-Day Badge
next-gen conference
updated 7 months ago by 40k • written 10.7 years ago by ▴ 30
3
votes
5
replies
1.7k
views
News: (18 August - "Enzyme Stability Prediction") A free webinar on on-going CAFA5 (Critical Assessment of Functional Annotation of proteins) challenge
gene-ontology CAFA protein
5 weeks ago by Alexander ▴ 200
3
votes
3
replies
3.7k
views
News: A Tale Of Next Generation Sequencing Platforms: Ion Torrent, Pacific Biosciences And Illumina Miseq
sequencing
updated 7 months ago by 40k • written 11.1 years ago by 98k
3
votes
2
replies
907
views
News: BETA Testing Opportunity for new RNA-seq data analysis tool
beta-testing RNA-seq multi-omics ngs
updated 4 months ago by 40k • written 4.7 years ago by • 0
3
votes
2
replies
1.1k
views
News: Course "Data Crunching: from hell to heaven", Udine, Italy, 25-27 July, 2018
NGS next-generation-sequencing
updated 4 months ago by 40k • written 5.3 years ago by ★ 3.0k
3
votes
0
replies
1.5k
views
News: Bioconductor Conference, July 31 - Aug 1, 2014, Boston
bioconductor
updated 6 months ago by 40k • written 9.3 years ago by 26k
3
votes
0
replies
932
views
News: Free online Ensembl course
webinar Ensembl mooc training online
updated 4 months ago by 40k • written 5.1 years ago by 23k
3
votes
1
reply
1.4k
views
News: Frederick Sanger ( 1918 - 2013 )
sanger-institute
updated 6 months ago by 40k • written 9.9 years ago by 157k
3
votes
1
reply
2.1k
views
News: NCBI : New API Keys for the E-utilities
pubmed eutils ncbi api
updated 4 months ago by 40k • written 5.9 years ago by 157k
3
votes
1
reply
731
views
News: PrecisionFDA has won a FedHealth IT award!!
platform cloud-based precision-medicine award
updated 3 months ago by 40k • written 4.3 years ago by ▴ 150
3
votes
1
reply
1.2k
views
News: GATK returns to a fully open-source license
gatk
updated 4 months ago by 40k • written 6.3 years ago by 98k
3
votes
3
replies
825
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
4 months ago by PeterC_NCBI ▴ 330
3
votes
0
replies
3.1k
views
News: Tumorportal - A Tool For Exploring A Pan-Cancer Dataset
tcga cancer-genomics
updated 6 months ago by 40k • written 9.6 years ago by 19k
3
votes
0
replies
2.2k
views
News: 2013 Gmod Community Survey
gff3 galaxy biomart
updated 7 months ago by 40k • written 10.6 years ago by ▴ 280
3
votes
4
replies
2.2k
views
News: Training in Metagenomics Data Analysis @NIH, USA, Nov 14 - 17, 2017
metagenomics microbiome training
updated 5 months ago by 40k • written 7.0 years ago by ▴ 130
3
votes
0
replies
1.0k
views
News: New command line tool for annotating variants, vai.pl
UCSC SNP VAI
updated 4 months ago by 40k • written 6.3 years ago by ▴ 580
3
votes
0
replies
2.6k
views
News: Bioinformatics Specialization on Coursera
MOOCs Education
updated 11 months ago by 40k • written 8.1 years ago by ▴ 50
3
votes
0
replies
2.3k
views
News: Samtools/htslib/bcftools 1.1 released
htslib samtools
updated 6 months ago by 40k • written 9.0 years ago by 103k
3
votes
6
replies
2.5k
views
News: Brief Getting Started with Broad Firecloud tutorial posted
RNA-Seq
updated 5 months ago by 40k • written 7.2 years ago by 26k
3
votes
0
replies
2.6k
views
News: SeqAhead - COST - Bioinformatics for Non-Coding RNAs: State-of-the-art Training Workshop: 30/6-3/7/2014, Athens, Greece
RNA-Seq workshop lncRNA microRNA
updated 6 months ago by 40k • written 9.4 years ago by ★ 1.3k
3
votes
1
reply
1.3k
views
News: Ensembl in Google Summer of Code
Ensembl Internship Google-Summer-of-Code GSOC
updated 4 months ago by 40k • written 6.5 years ago by 23k
3
votes
5
replies
2.1k
views
News: Published: GeneSCF: a real-time based functional enrichment tool with support for multiple organisms
kegg gene-enrichment cancer gene-ontology
updated 5 months ago by 40k • written 7.0 years ago by 7.5k
3
votes
0
replies
640
views
News: Free Ensembl Browser and REST API virtual workshops in March
Ensembl REST-API genome-browser training workshop
updated 7 months ago by 40k • written 2.6 years ago by ▴ 270
3
votes
0
replies
1.6k
views
News: European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
Bioconductor Conference
updated 5 months ago by 40k • written 8.0 years ago by ▴ 230
3
votes
0
replies
4.3k
views
News: Free Online Harvardx Course, Data Analysis For Genomics, Starts April 7
methylation bioconductor ChIP-seq RNA-seq R
updated 6 months ago by 40k • written 9.5 years ago by ★ 2.2k
3
votes
1
reply
2.4k
views
News: Variathon V0.1 - 2013 - Comparing Existing Or New Pipelines For Variant Calling In Terms Of Accuracy And Efficiency
ngs conference
updated 7 months ago by 40k • written 10.6 years ago by 157k
3
votes
2
replies
483
views
News: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomics, Jul 31 - Aug 4, 2023
VCF SARS-CoV-2 NCBI Codeathon
4 months ago by PeterC_NCBI ▴ 330
1,000 results • Page 5 of 20
Recent Votes
Human Genomics Team Leader
Comment: Low Alignment rate
Answer: Filter transcription factors
Answer: Filter transcription factors
Answer: Filter transcription factors
Comment: Integrated Seurat object change name of the two conditions
Comment: Integrated Seurat object change name of the two conditions
Recent Locations • All
Glasgow, UK, just now
Germany, 2 minutes ago
United States, 2 minutes ago
France, 4 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 5 minutes ago
Canada, 5 minutes ago
United States, 5 minutes ago
Recent Awards • All
Popular Question to Bioinfonext ▴ 440
Scholar to benformatics 3.7k
Popular Question to adeizadavid ▴ 10
Popular Question to dec986 ▴ 370
Popular Question to arriyaz.nstu ▴ 30
Popular Question to gyspace • 0
Teacher to ATpoint 76k
Recent Replies
Comment: I have performed Trimmomatic run for adapter removal. QC report shows drop in th by swbarnes2 13k
The library is non-existent? The reagents got fried? The instrument failed? All of those will affect the assembly processes in a profoun…
Answer: How to find the most representative protein data base ID for your protein? by GenoMax 134k
Option 1: Use MANE select proteins that you can download here (latest release as of today will keep changing) : https://ftp.ncbi.nlm.nih.g…
Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool? by ATpoint 76k
Never tried, so idk. Why wouldn't it support it?
Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool? by ATpoint 76k
I never tried conda images but since `mamba > conda` I guess mambaforge is better.
Comment: Filter human transcription factors by Chris ▴ 180
Thank you so much!
Comment: Filter human transcription factors by Chris ▴ 180
Yes, I do GO and GSEA to get pathway. I download the background gene at https://www.gsea-msigdb.org/gsea/msigdb/human/collections.jsp#C3 Th…
Answer: Visualize where kmers are on a reference genome by Alex Reynolds 35k
Make a bigBed file: https://www.biostars.org/p/9546293/ Then view it on the UCSC Genome Browser: http://genome.ucsc.edu/goldenPath/help/…
Comment: Integrated Seurat object change name of the two conditions by camillab. ▴ 130
great! thank you very much!
Answer: Filter transcription factors by jared.andrews07 ★ 15k
[This database](http://humantfs.ccbr.utoronto.ca/download.php) has been the best I've found.
Comment: Filter transcription factors by Ram 40k
What have you tried? Have you looked at GO annotations?
Comment: how to identify uniq genes between two gff files. by nikhil ▴ 10
yes @juke34 , I tried agat_sp_compare_two_annotations.pl for both gff files and got comparative output in table format. Thank you very muc…
Comment: Integrated Seurat object change name of the two conditions by Amitm ★ 2.2k
Yes, its similar structure. This snippet should add a new metadata column "sample.New" with what you want to do # Assuming a seurat obj. c…
Comment: Low Alignment rate by biofalconch ▴ 970
Yeap, you can sample your reads with `seqtk` like this: seqtk sample -s100 read2.fq 100 > Sample.fq Take a couple and run them throug…
Answer: obtaining circular RNAs' sequences from circBase by Barry Digby ★ 1.2k
You won't find them on circBase. circAtlas has the mature spliced sequence available. You can [search for circRNAs](https://ngdc.cncb.a…
Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool? by Ram 40k
\#TIL mambaforge - better than continuum's conda images I'm guessing?
Traffic: 4176 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6