updated 20 hours ago by
Thanujay S
•
0
•
written 12.5 years ago by
woemler
▴
170
22
votes
15
replies
10k
views
12 follow
11
votes
13
replies
6.7k
views
7 follow
7
votes
13
replies
793
views
7 follow
8
votes
9
replies
3.0k
views
7 follow
updated 1 hour ago by
ericrkofman
▴
20
•
written 10.1 years ago by
win
▴
980
0
votes
9
replies
493
views
updated 3 hours ago by
ATpoint
82k
•
written 6 days ago by
hannes.bongartz
•
0
3
votes
7
replies
3.9k
views
1
vote
6
replies
276
views
updated 15 hours ago by
aw7
▴
310
•
written 1 day ago by
LucisTheFather
•
0
2
votes
6
replies
278
views
19 hours ago by
anikcropscience
▴
230
4
votes
6
replies
305
views
6 hours ago by
Shicheng Guo
★
9.4k
2
votes
5
replies
226
views
1
vote
5
replies
202
views
updated 10 hours ago by
Pierre Lindenbaum
162k
•
written 14 hours ago by
NTerway
•
0
5
votes
4
replies
5.1k
views
6 follow
1
vote
4
replies
388
views
0
votes
4
replies
366
views
5 hours ago by
mavy
▴
10
2
votes
4
replies
1.2k
views
14 hours ago by
Aspire
▴
330
1
vote
3
replies
208
views
updated 5 hours ago by
Jeremy
▴
910
•
written 1 day ago by
Mohamed Samir
▴
30
7
votes
3
replies
13k
views
updated 18 hours ago by
Akash D
▴
60
•
written 6.5 years ago by
rob.costa1234
▴
310
0
votes
3
replies
143
views
updated 3 hours ago by
ATpoint
82k
•
written 6 hours ago by
shahzaibali
•
0
1
vote
3
replies
904
views
updated 23 hours ago by
David-walson
•
0
•
written 16 months ago by
Apprentice
▴
160
0
votes
2
replies
135
views
1
vote
2
replies
129
views
0
votes
2
replies
195
views
0
votes
2
replies
608
views
1
vote
2
replies
133
views
0
votes
1
reply
96
views
Trying to understand warning from MACS2 about too few paired peaks and differing results in DiffBind
updated 6 hours ago by
jared.andrews07
★
17k
•
written 10 hours ago by
atan
•
0
0
votes
1
reply
240
views
updated 16 hours ago by
韩雨
•
0
•
written 5 weeks ago by
solomoncharles77
▴
90
0
votes
1
reply
97
views
0
votes
1
reply
117
views
updated 11 hours ago by
Ram
44k
•
written 18 hours ago by
mohamadzare6022
▴
10
0
votes
1
reply
110
views
updated 11 hours ago by
Ram
44k
•
written 1 day ago by
avelarbio46
▴
30
0
votes
1
reply
86
views
0
votes
1
reply
78
views
4
votes
1
reply
111
views
2
votes
0
replies
93
views
0
votes
0
replies
65
views
updated 11 hours ago by
Ram
44k
•
written 16 hours ago by
emmanouil.a
▴
120
0
votes
0
replies
57
views
14 hours ago by
adarsh_pp
▴
40
0
votes
0
replies
38
views
0
votes
0
replies
10
views
0
votes
0
replies
57
views
0
votes
0
replies
48
views
0
votes
0
replies
43
views
updated 4 hours ago by
Ram
44k
•
written 5 hours ago by
Christopher
▴
10
0
votes
0
replies
98
views
20 hours ago by
Tim
•
0
0
votes
0
replies
82
views
0
votes
0
replies
75
views
0
votes
0
replies
83
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
Japan, 12 minutes ago
Texas, United States, 16 minutes ago
Ambler, 19 minutes ago
United States, 19 minutes ago
Hong Kong, 19 minutes ago
Australia, 28 minutes ago
Recent Awards •
All
Popular Question to
WUSCHEL
▴
760
Popular Question to
ericrkofman
▴
20
Popular Question to
Erika
•
0
Popular Question to
bioinfo
▴
150
Popular Question to
a.bibek52
▴
10
Recent Replies
Answer: Venter Genome Vcf
by
ericrkofman
▴
20
I can't find an hg38 version, and the old VCF seems to be of a different header format so I am having difficulty converting it to hg38 from…
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
Preferred if you have true biological replicates. Can still be combined with my subsetting strategy, like use 100x different cells for the …
Answer: ComplexHeatmap - How to change fontsize of rowAnnotation
by
ATpoint
82k
```r
set.seed(1)
m = matrix(rnorm(100), nrow = 10)
rownames(m) = 1:10
# normal
ha = rowAnnotation(foo = anno_mark(at=1:nrow(m), labels=row…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
44k
Please do not add answers unless you're actually answering the question. I've moved your post to a comment.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
I still cannot find a way. It seems to be an easy to solve issue and I was trying any possible combination with the aforementioned gp=gpar(…
Comment: What is a good way to do gene differentials in single cell data where one group
by
fracarb8
★
1.6k
I would probably use a pseudobulk approach.
Comment: Error when looping over multiple columns in a data frame in R
by
Jeremy
▴
910
`cutpoint_results[[col_name]]` adds each new cut point to the list entitled "cutpoint_results", while keeping the original column names fr…
Answer: PCA plot no distinct cluster. Only p < 0.05 indicates significant DEGs, while ad
by
swbarnes2
14k
Never use uncorrected p-values with RNASeq.
Your PCA is suggesting that your sample groups are not very different, and the DEG tests con…
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
I would keep it transparent. Do DE by subsetting large to small group. Do that randomly many times, then either average stats or use some s…
Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
by
jared.andrews07
★
17k
Without looking at the actual sequence for each genome, my guess is that the Echinobase reference just matches much more closely to the org…
Comment: What do the transcript variant # mean in RefSeq?
by
Ram
44k
> It does not seem to be the longest transcript. Is it the canonical transcript?
Longest == canonical. If you're looking for the transcrip…
Comment: Mouse or Rat Gene Expression Data Similar to GTEx
by
Shicheng Guo
★
9.4k
Hi ATpoint, Thank you for your responses. My apologies if my inquiries have seemed one-sided. I greatly value the collaborative spirit of t…
Comment: Mouse or Rat Gene Expression Data Similar to GTEx
by
ATpoint
82k
Team? A team helps each other out. You only take help by posting your regular lazy do-my-work questions and never give anything back. Save …
Comment: What do the transcript variant # mean in RefSeq?
by
GenoMax
142k
> What do these correspond to? It does not seem to be the longest transcript. Is it the canonical transcript?
Those are just different tra…
Answer: Mouse or Rat Gene Expression Data Similar to GTEx
by
jared.andrews07
★
17k
MGI has a [Gene Expression Database](https://www.informatics.jax.org/expression.shtml) that'll largely get you what you want.
Traffic: 1776 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6