2
votes
3
replies
817
views
3
votes
12
replies
2.9k
views
0
votes
0
replies
470
views
0
votes
2
replies
2.2k
views
1
vote
2
replies
1.1k
views
updated 9 months ago by
ATpoint
89k
•
written 9 months ago by
Francois Piumi
▴
70
0
votes
0
replies
277
views
9 months ago by
Mian Numan
•
0
0
votes
0
replies
387
views
2
votes
1
reply
564
views
0
votes
2
replies
1.3k
views
5
votes
6
replies
8.3k
views
2
votes
1
reply
807
views
updated 9 months ago by
shinken123
▴
150
•
written 14 months ago by
Physalia-courses
★
2.6k
1
vote
0
replies
490
views
1
vote
1
reply
539
views
1
vote
2
replies
1.2k
views
updated 9 months ago by
yura.grabovska
▴
820
•
written 2.4 years ago by
Nal23
▴
10
0
votes
0
replies
352
views
1
vote
3
replies
931
views
updated 9 months ago by
jared.andrews07
★
19k
•
written 9 months ago by
iqra
•
0
0
votes
0
replies
372
views
2
votes
5
replies
1.2k
views
9
votes
10
replies
6.9k
views
11 follow
updated 9 months ago by
Saeed
▴
10
•
written 10.3 years ago by
Zhilong Jia
★
2.2k
1
vote
5
replies
1.2k
views
updated 9 months ago by
GenoMax
153k
•
written 10 months ago by
prithvi.mastermind
▴
60
3
votes
4
replies
1.1k
views
2
votes
2
replies
841
views
9 months ago by
lingjun meng
▴
20
3
votes
8
replies
2.6k
views
updated 9 months ago by
colindaven
7.9k
•
written 9 months ago by
gtiegs
▴
20
2
votes
4
replies
1.2k
views
1
vote
2
replies
696
views
0
votes
2
replies
675
views
0
votes
1
reply
764
views
updated 9 months ago by
ATpoint
89k
•
written 9 months ago by
koleilat.karim
•
0
2
votes
2
replies
850
views
0
votes
2
replies
781
views
updated 9 months ago by
tim.booth
▴
110
•
written 9 months ago by
snakemakeioapp
•
0
3
votes
7
replies
1.8k
views
0
votes
5
replies
1.4k
views
updated 9 months ago by
lieven.sterck
15k
•
written 9 months ago by
El-32
•
0
0
votes
0
replies
293
views
9 months ago by
RUBA
•
0
7
votes
5
replies
5.8k
views
0
votes
2
replies
1.2k
views
0
votes
4
replies
1.3k
views
updated 9 months ago by
Zhenyu Zhang
★
1.3k
•
written 10 months ago by
Jaber
▴
30
0
votes
4
replies
914
views
0
votes
2
replies
888
views
2
votes
3
replies
914
views
updated 9 months ago by
GenoMax
153k
•
written 9 months ago by
Hansen_869
▴
80
0
votes
1
reply
432
views
updated 9 months ago by
Ram
45k
•
written 9 months ago by
Bruna Avelino
▴
10
3
votes
2
replies
1.8k
views
1
vote
4
replies
1.1k
views
0
votes
4
replies
1.2k
views
3
votes
1
reply
754
views
updated 9 months ago by
lieven.sterck
15k
•
written 9 months ago by
pedro.rrmb
•
0
2
votes
5
replies
2.9k
views
1
vote
4
replies
1.1k
views
0
votes
0
replies
412
views
1
vote
2
replies
741
views
updated 9 months ago by
lieven.sterck
15k
•
written 9 months ago by
Vijith
▴
100
3
votes
8
replies
1.6k
views
3
votes
5
replies
993
views
updated 9 months ago by
Bastien Hervé
6.5k
•
written 9 months ago by
mesebaesko
▴
10
2
votes
3
replies
843
views
updated 9 months ago by
Michael
56k
•
written 9 months ago by
microorganism_001
▴
30
Recent Votes
Recent Locations •
All
Norway, 5 minutes ago
Heraklion, Crete, Greece, 6 minutes ago
India, 9 minutes ago
Frankrike, 11 minutes ago
Russian Federation, 14 minutes ago
India, 21 minutes ago
India, 24 minutes ago
Recent Awards •
All
Popular Question to
1769mkc
★
1.3k
Popular Question to
Kent
▴
30
Popular Question to
ki
•
0
Popular Question to
Ant
▴
40
Popular Question to
Physalia-courses
★
2.6k
Popular Question to
soledad.esteban
▴
10
Popular Question to
alison.ludzki
•
0
Recent Replies
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
I don't mean adapter contamination. I mean contamination of your sample with DNA from other organisms. In my previous lab, for example, we …
Answer: Trouble when installing arb
by
SilentGene
▴
120
I've got the same error when installing from `arb-6.0.6-source.tgz` and `arb-7.0-source.tgz`. Anyone has any solution?
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
Yes, I did check for adaptor contamination, and did not find any. I have kept all the reads with quality score of more than 30.
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
No overlapping reads? Have you checked for contamination?
Comment: Tried building a compact sequence format with 4-bit storage
by
Pranava
▴
10
I see, but the reason I was planning on using a 4bit system is so that there wouldn't be too much data loss but thank you for the suggesti…
Comment: Splice junctions plots for long-read seq data
by
alison.ludzki
•
0
Thank you! I will check out miso!
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
I did subsample the data to 30x coverage. I did run hifiasm on it, the log file did show some contents, but hifiasm ended again, stating th…
Comment: Tried building a compact sequence format with 4-bit storage
by
Alex Reynolds
36k
Using four bits for storage won't beat 2bit, of course, but direct access to a sequence of interest sounds interesting and useful and might…
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
Why don't you subsample your HiFi reads and try running hifiasm again? Maybe this will help if you have memory problems. However, I haven't…
Comment: Is total miRNA in EV constant? Implications for library size normalization.
by
Gordon Smyth
★
8.3k
RNA-seq is very good at relative analyes. It would be straightforward to determine which miRNAs are relatively more abundant, compared to o…
Comment: Tried building a compact sequence format with 4-bit storage
by
Pranava
▴
10
Woah!!! Thank you very much, Matthias. I honestly didn't even know some of those existed and I will definitely go through them and try to u…
Answer: Tried building a compact sequence format with 4-bit storage
by
Matthias Zepper
5.1k
Hello Pranava,
Thanks for sharing your repository. Devising a new file format is an interesting undertaking and certainly a task with many…
Answer: Gene Ontology Enrichment with LOC gene IDs in Common Carp (Cyprinus carpio)
by
GenoMax
153k
`LOC` gene ID's are often assigned to uncharacterized genes and you may not get useful information from databases for them, thus they will …
Comment: Whole Genome Sequencing IG regions
by
GenoMax
153k
> are the calls I am seeing reliable or should I take them with something of a pinch of salt?
Not sure what calls you are referring to but…
Traffic: 3725 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6