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122,027 results • Page
584 of 2441
Sort: Rank
Rank
Views
Votes
Replies
0
votes
0
replies
632
views
Inter-sample variance explained
composition
inter-sample
single-cell
variance
clsuter
4.1 years ago by
christianhinze
• 0
2
votes
1
reply
1.3k
views
R package for structural variation representation ?
structural
variation
mummer
updated 4.1 years ago by
benformatics
4.2k • written 4.1 years ago by
Picasa
▴ 690
0
votes
0
replies
1.4k
views
Apply a batch effect with "combatseq" in wgcna
deseq2
R
batch
combatseq
wgcna
updated 4.1 years ago by
rpolicastro
13k • written 4.1 years ago by
Maryam
• 0
3
votes
6
replies
4.4k
views
gffread error
gtf
gff
gffread
4.1 years ago by
rhksgudbc
• 0
0
votes
2
replies
1.3k
views
Removing headlines in fasta file in python
fasta
python
updated 2.7 years ago by
Ram
45k • written 4.1 years ago by
Maliha
• 0
0
votes
2
replies
3.1k
views
Remove PolyA 3'End with cutadapt
sequencing
4.1 years ago by
GiV17
▴ 50
7
votes
1
reply
4.4k
views
HTseq doesn't support Multi-Threading ?
htseq-count
htseq
thread
multithread
count
updated 4.1 years ago by
Michael
56k • written 4.1 years ago by
rlatjsgns129
▴ 20
1
vote
2
replies
1.0k
views
Can the Non strand specify RNAseq data annotate genome?
RNA-Seq
4.1 years ago by
yiren
▴ 10
0
votes
4
replies
1.8k
views
How to filter GATK vcf file using other programs
VCF
Filtration
GATK
4.1 years ago by
reza
▴ 300
5
votes
8
replies
2.6k
views
How to make fasta manipulation more efficient
fasta
sequence
4.1 years ago by
c_u
▴ 530
0
votes
0
replies
775
views
Separate vcf file creation for matched tumor-normal samples
vcf
4.1 years ago by
Gene_MMP8
▴ 250
1
vote
1
reply
770
views
Clarification on transcripts
Transcripts
genes
updated 4.1 years ago by
ATpoint
89k • written 4.1 years ago by
Cheng Wei
• 0
1
vote
2
replies
1.4k
views
where do I find transcript_biotype
refseq
biotype
transcript
updated 4.1 years ago by
Congcong
• 0 • written 4.1 years ago by
newbie_r
• 0
3
votes
5
replies
2.3k
views
Commandline BLAST - errors?
line
BLAST
RNA-seq
command
updated 4.1 years ago by
Tm
★ 1.1k • written 4.1 years ago by
bry.th
• 0
0
votes
0
replies
646
views
What is meant by transcriptional changes executed by the cell over a time period?
single-cell
rna
dna
transcriptome-regulation
gene
4.1 years ago by
Deepak
• 0
1
vote
7
replies
2.8k
views
6 follow
genBlastA output file .gblast error
genome
sequence
software error
updated 2.5 years ago by
jaredbernard
▴ 30 • written 4.9 years ago by
taylorzheng.zz
• 0
5
votes
7
replies
2.5k
views
Genomic landscape of Neisseria gonorrhoeae wild-type strain whole genome schematic.
Figures
Neisseria_gonorrhoeae
regions
whole_genome
Strain
updated 4.1 years ago by
GenoMax
154k • written 4.1 years ago by
eli_bayat
▴ 100
5
votes
6
replies
2.4k
views
Can HMMs detect partial proteins sequences?
metagenomics
HMM
4.1 years ago by
Rui
▴ 50
1
vote
0
replies
829
views
R package for determining best model transformation for a dataset?
R
4.1 years ago by
DNAngel
▴ 260
2
votes
2
replies
1.5k
views
How are the HMM cutoff scores in TIGRFAMs determined?
metagenomics
HMM
4.1 years ago by
Rui
▴ 50
4
votes
5
replies
2.5k
views
Getting cDNA sequence from NCBI
fetch
sequence
gene
ncbi
updated 4.1 years ago by
GenoMax
154k • written 4.1 years ago by
Ibrahim Tanyalcin
★ 1.2k
3
votes
2
replies
1.7k
views
DiffBind - low number of significant peaks for one contrast
diffbind
ATAC
4.0 years ago by
CB
▴ 20
0
votes
0
replies
646
views
Docking
Docking
to
docking
Polymer
ligand
updated 4.1 years ago by
GenoMax
154k • written 4.1 years ago by
nimrahzafar14
• 0
7
votes
6
replies
2.2k
views
Can non-driver mutations disrupt the function of proteins and further affect a cellular pathway?
driver
somatic
annotation
VCF
oncoplot
updated 4.1 years ago by
Collin
▴ 1000 • written 4.1 years ago by
Zahra
▴ 110
1
vote
1
reply
3.4k
views
Library id - SRA submission
library
id
SRA
updated 4.1 years ago by
GenoMax
154k • written 4.1 years ago by
Mariela
▴ 10
3
votes
3
replies
2.1k
views
Differential expression analysis between normal/cancer on recount2 data
recount
GTEX
TCGA
RNA-seq
batch
updated 4.1 years ago by
Kevin Blighe
89k • written 4.1 years ago by
erica.fary
▴ 20
0
votes
5
replies
2.9k
views
How can I do this oncoplot using complexheatmap
oncoplot
complexheatmap
4.1 years ago by
573356741
• 0
0
votes
2
replies
3.5k
views
Filtering relevant Gene Ontology (GO) results from Gene Set Enrichment Analysis (GSEA)
GSEA
leadingedgeanalysis
DESeq2
updated 4.1 years ago by
rodolfo.peacewalker
▴ 390 • written 4.1 years ago by
Ayesha
• 0
5
votes
7
replies
6.7k
views
Bedtools - converting multiple bam files to bed
BED
Bedtools
Python
BAM
to
4.1 years ago by
rbravos87
• 0
0
votes
0
replies
574
views
Tool for calculating base-level error rate in WGS.
WGS
NGS
4.1 years ago by
Ruolin Liu
• 0
7
votes
14
replies
4.0k
views
How to count gene expression level in R?
expression
seurat
r
gene
bioconductor
4.1 years ago by
ja4123
▴ 30
0
votes
0
replies
580
views
Aligning multiple overlapping DNA sequence reads to predicted sequence not working
sequence-alignment
sequencing
4.1 years ago by
samuelhaysom
• 0
10
votes
5
replies
6.8k
views
which matrix should NMF use in single cell RNA seq data to find diferential gene program?
RNA-Seq
updated 4.1 years ago by
zdebruine
▴ 120 • written 5.5 years ago by
hq.huang11.6
▴ 10
2
votes
6
replies
2.3k
views
BioLabDonkey
BioLabDonkey
updated 3.9 years ago by
vytarasov
▴ 180 • written 4.3 years ago by
m.malosio
• 0
1
vote
3
replies
1.4k
views
Comparing ribo-minus and polyA-selected RNAseq data
library
type
RNAseq
updated 4.1 years ago by
dsull
★ 7.7k • written 4.1 years ago by
Josip
▴ 40
1
vote
2
replies
1.5k
views
VCFtools doesn't keep any variants using GATK output
gatk
vcftools
snps
updated 2.6 years ago by
Ram
45k • written 4.1 years ago by
fcarolinebe
▴ 40
0
votes
1
reply
1.5k
views
Tool:
BioFileConverter - an app for Mac users to convert .xdna and .dna files into genbank .gb files and more
dna
genbank
xdna
updated 2.6 years ago by
Ram
45k • written 4.1 years ago by
vytarasov
▴ 180
4
votes
12
replies
4.9k
views
6 follow
snpeff : wont recognize the gtf or gff3 files (runtime exception)
GTF
GFF3
snpeff
updated 2.3 years ago by
bestone
▴ 30 • written 4.1 years ago by
VenGeno
▴ 100
1
vote
2
replies
1.2k
views
Replacing default numbers with geneNames in enhancedVolcano
EnhancedVolcano
updated 18 months ago by
Ram
45k • written 4.1 years ago by
Mohan
• 0
0
votes
4
replies
3.0k
views
Can I use the summits.bed from MACS2 on HOMER
Homer
Macs
callpeak
bed
updated 4.1 years ago by
Friederike
9.0k • written 4.1 years ago by
damika
• 0
3
votes
0
replies
920
views
Herald:
The Biostar Herald for Friday, September 03, 2021
herald
4.1 years ago by
Biostar
3.6k
1
vote
4
replies
3.8k
views
Anova for proteomics
proteomics
anova
4.1 years ago by
FF
• 0
0
votes
0
replies
596
views
Criteria to select best model in 3Drefine
refine
model
Protein
refinement
3D
4.1 years ago by
Maham
• 0
1
vote
2
replies
1.3k
views
Tool to predict protein binding to DNA (what exact nitrogenous bases)
DNA
Protein
Binding
4.1 years ago by
Rafael Soler
★ 1.3k
1
vote
6
replies
2.9k
views
Methylkit (differential methylation analysis) error in data frame
methylation
differential
analysis
R
methylkit
4.1 years ago by
harshraje19
▴ 50
1
vote
4
replies
1.7k
views
Case Control count per variant
WGS
VCF
Annotation
NGS
4.1 years ago by
williamsbrian5064
▴ 540
1
vote
0
replies
987
views
Job:
BIOINFORMATICS PROGRAMMER
PROGRAMMER
updated 2.7 years ago by
Ram
45k • written 4.1 years ago by
ads
▴ 10
2
votes
3
replies
1.3k
views
Comparing two conditions within multiple different groups with unequal sizes in DESeq
RNAseq
DESeq2
transcriptomics
updated 4.1 years ago by
Papyrus
★ 3.1k • written 4.1 years ago by
heather.jackson17
• 0
1
vote
6
replies
1.7k
views
Hisat2 error
Hisat2
4.1 years ago by
sherafzalk769
▴ 10
2
votes
2
replies
1.3k
views
How to extract unique fastq seq. from BAM, irrespective of FLAG value ?
fastq
BAM
updated 4.1 years ago by
swbarnes2
15k • written 4.1 years ago by
ved_vyas
▴ 40
122,027 results • Page
584 of 2441
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Your first command outputted SAM rather than BAM, and SAM without a header (no `-h`) option. If you used `-o contig_1.bam` it would have w…
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Seconding this, I also felt completely lost what this actually does. @OP, you need to learn to make sharp, concise bulletpoints advertising…
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I would not do correlation analysis like this, I don't see how this makes any sense. Integration is possible but cumbersome. Instead, use `…
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From databases dedicated to the specific disorder, GWAS catalog, Disgenet, OMIM and Literature searches across Pubmed.
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Provide a vector of representative normal cells from each normal sample in the `norm.cell.names` option.
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