updated 28 minutes ago by
b.contreras.moreira
▴
180
•
written 18 hours ago by
ijarne
•
0
9
votes
3
replies
156
views
0
votes
0
replies
19
views
0
votes
0
replies
15
views
1
vote
2
replies
50
views
0
votes
0
replies
19
views
1 hour ago by
Omics data mining
▴
260
0
votes
2
replies
32
views
3 minutes ago by
njornet
▴
20
0
votes
1
reply
42
views
0
votes
4
replies
56
views
0
votes
0
replies
34
views
0
votes
4
replies
105
views
2
votes
11
replies
2.5k
views
6 follow
updated 3 hours ago by
DGTool
•
0
•
written 4.8 years ago by
ww22runner
▴
60
795
votes
167
replies
143k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
0
replies
37
views
2
votes
1
reply
51
views
5 hours ago by
analyst
▴
50
0
votes
0
replies
31
views
0
votes
0
replies
30
views
5 hours ago by
usa.cd.genomics
•
0
0
votes
0
replies
27
views
5 hours ago by
usa.cd.genomics
•
0
0
votes
0
replies
49
views
10 hours ago by
kyj222637
•
0
0
votes
0
replies
48
views
11 hours ago by
sooni
▴
20
1
vote
5
replies
357
views
0
votes
1
reply
201
views
updated 12 hours ago by
mizraelson
▴
60
•
written 7 days ago by
yueli7
▴
250
0
votes
2
replies
107
views
0
votes
0
replies
52
views
13 hours ago by
synat.keam
▴
100
0
votes
1
reply
99
views
1
vote
4
replies
305
views
16 hours ago by
heelpPlease
•
0
0
votes
6
replies
335
views
3 hours ago by
JACKY
▴
140
0
votes
3
replies
206
views
0
votes
0
replies
74
views
20 hours ago by
carlopecoraro2
★
2.5k
0
votes
2
replies
424
views
updated 13 hours ago by
Javier
•
0
•
written 3 months ago by
fra.r.silvestro
▴
10
0
votes
1
reply
103
views
5
votes
5
replies
224
views
0
votes
1
reply
107
views
updated 23 hours ago by
ATpoint
82k
•
written 23 hours ago by
ahmad.sajad4541
•
0
1
vote
5
replies
174
views
updated 20 hours ago by
i.sudbery
19k
•
written 23 hours ago by
Assa Yeroslaviz
★
1.8k
1
vote
1
reply
127
views
0
votes
0
replies
82
views
1 day ago by
analyst
▴
50
0
votes
3
replies
142
views
6
votes
1
reply
122
views
2
votes
2
replies
141
views
8 hours ago by
Zeng Jingyu
▴
60
1
vote
2
replies
223
views
0
votes
1
reply
84
views
updated 40 minutes ago by
manaswwm
▴
510
•
written 1 day ago by
Researcher
▴
30
1
vote
2
replies
149
views
1
vote
1
reply
190
views
1
vote
5
replies
272
views
updated 2 hours ago by
Michael
54k
•
written 1 day ago by
qwertyuiop26
•
0
0
votes
1
reply
145
views
0
votes
2
replies
192
views
updated 1 day ago by
Xiaofen
•
0
•
written 1 day ago by
toddknutson
▴
60
0
votes
1
reply
117
views
1
vote
2
replies
150
views
0
votes
0
replies
96
views
1 day ago by
Scott McKay
▴
30
0
votes
0
replies
98
views
1 day ago by
piotto
▴
20
0
votes
0
replies
115
views
Recent Votes
Recent Locations •
All
Taiwan, just now
Spain, 1 minute ago
Italy, 1 minute ago
Spain, 1 minute ago
United States, 1 minute ago
UK, 2 minutes ago
Italy, 3 minutes ago
Recent Awards •
All
Popular Question to
User000
▴
690
Popular Question to
ingerslev
•
0
Popular Question to
Tastulek
•
0
Teacher to
jared.andrews07
★
16k
Recent Replies
Comment: Phasing a mixture of two individuals' DNA with long reads
by
njornet
▴
20
This is related to that other question but for now, the only thing I'm interested in is separating the three unique chromosomes, without as…
Comment: A question about reference genome for creating the consensus sequence
by
GenoMax
142k
> I wonder how to adjust the base genome.
If you are looking to make changes to the reference you used for alignment then look into http…
Comment: Phasing a mixture of two individuals' DNA with long reads
by
GenoMax
142k
We had a related discussion in a prior thread by OP: https://www.biostars.org/p/9593780/
Do you have genotype (or independent sequence) da…
Answer: TFs and Gene databases
by
b.contreras.moreira
▴
180
I can also suggest <https://footprintdb.eead.csic.es> which links TFs to their DNA motifs, not their gene targets.
Comment: Correlation Analysis
by
manaswwm
▴
510
How many methylation and expression values do you have per gene? If per gene you have a table named - *gene_corr*; which has two columns - …
Comment: How do I change the title font size in ViolinPlot (Seurat)
by
Assa Yeroslaviz
★
1.8k
thx for the explanation.
I did look at the function and I also read in the help page, that you get a patchwork object, only when using `co…
Comment: Percentage coverage of reference genome by de novo genome
by
Lemonhope
•
0
Thank you, I'll check out Quast!
Answer: How do I change the title font size in ViolinPlot (Seurat)
by
ATpoint
82k
Looking at the source code of the function it seems that they make individual plots with ggplot when `features` is `> 1` and then use patch…
Comment: Percentage coverage of reference genome by de novo genome
by
Lemonhope
•
0
Thank you for the response
to answer you question, no, the ddRADseq data (short paired end illumina reads) for all the samples were used …
Comment: Percentage coverage of reference genome by de novo genome
by
Michael
54k
minimap2 can do this too, mummer (nucmer) is more accurate but slightly slower. If you want to do this as part of generating assembly stati…
Comment: TFs and Gene databases
by
ijarne
•
0
Thank you so much @jaredandrews07 it looks like I will be able to get what I intended with these sources !!
Comment: Percentage coverage of reference genome by de novo genome
by
Joe
21k
If you have contigs for assemblies, using read-based approaches like samtools is probably not the way to go.
As you're interested in % cov…
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
by
ATpoint
82k
Has data been generated in the same batch, so same day, in the same 10x runs?
Answer: Comparative Analysis of Algorithms for Implementing the FM-Index: Correctness, C
by
Michael
54k
So I am assuming you have calculated a Burrows-Wheeler transform, then add the FM-index for the first and last column of the BW-matrix. I r…
Comment: STAR aligner error
by
M.
▴
30
I already told them but they couldn't come up with a useful solution :/
Traffic: 2144 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6