Limit : all time
all time today this week this month this year
1,000 results • Page 4 of 20
Sort: replies
Rank Views Votes Replies
21
votes
17
replies
9.2k
views
7 follow
Forum: In YOUR personal opinion, who are the top 5 bioinformatics researchers in NGS in 21st century?
next-gen
updated 13 months ago by 43k • written 7.4 years ago by ▴ 10
26
votes
17
replies
2.3k
views
9 follow
Forum: GalaxyProject, why and why not?
galaxy sequencing pipeline
updated 13 months ago by 43k • written 8.2 years ago by ▴ 50
42
votes
17
replies
38k
views
15 follow
Forum: List Of Genome Sequencing Centers/Institutes
genomics institutes
updated 14 months ago by 43k • written 11.2 years ago by 20k
13
votes
17
replies
4.9k
views
8 follow
Forum: A Universal/Common Biorep System
reputation
updated 14 months ago by 43k • written 10.4 years ago by 20k
15
votes
17
replies
3.4k
views
10 follow
Forum: What does a recruiter expect from a Bioinformatician ?
expectations recruitment skills
updated 22 months ago by 43k • written 6.2 years ago by ▴ 960
38
votes
17
replies
3.2k
views
7 follow
Forum: Why does bioinformatics use a special format like a BAM file instead of a database like SQLite?
sam bam samtools
updated 11 months ago by 43k • written 3.7 years ago by ▴ 250
33
votes
17
replies
3.5k
views
7 follow
Forum: What bioinformatics tools/software do not get enough recognition?
software
updated 14 months ago by 43k • written 9.5 years ago by 24k
22
votes
16
replies
7.2k
views
9 follow
Forum: Large Tables In Supplementary Pdf In Journal Articles
publication
updated 14 months ago by 43k • written 10.9 years ago by ▴ 520
21
votes
16
replies
3.2k
views
9 follow
Forum: Limit Upvotes Over A Certain Amount Of Hours
meta biostars
updated 15 months ago by 43k • written 11.3 years ago by ★ 3.6k
6
votes
16
replies
7.1k
views
6 follow
Forum: Immune repertoire sequencing community
sequencing repseq immunology tcr ig
updated 2.2 years ago by 43k • written 9.8 years ago by 3.5k
51
votes
16
replies
5.9k
views
11 follow
Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2011?
papers
updated 15 months ago by 43k • written 12.4 years ago by ★ 2.9k
55
votes
16
replies
6.0k
views
8 follow
Forum: Mission Impossible: you have 1 minute to analyze the Ebola Genome
ebola mission-impossible
updated 19 months ago by 43k • written 9.5 years ago by 100k
43
votes
16
replies
4.6k
views
10 follow
Forum: Need Advice On How To Become A Senior Bioinformatician
advice career
updated 14 months ago by 43k • written 11.0 years ago by ▴ 30
61
votes
16
replies
8.1k
views
14 follow
Forum: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
library
updated 16 months ago by ★ 1.3k • written 3.6 years ago by 8.5k
37
votes
16
replies
4.0k
views
9 follow
Forum: Sanger sequencing is no longer the gold standard?
Sanger NGS
updated 11 months ago by 43k • written 6.5 years ago by ▴ 220
15
votes
16
replies
1.9k
views
Forum: Modernising the FASTQ Format
FASTA Efficiency FASTQ
updated 13 months ago by 43k • written 7.2 years ago by ▴ 520
31
votes
16
replies
2.2k
views
8 follow
Forum: What is in your opinion the current state-of-the-art sequencing platform for genomic assembly (Nov 2019)
next-gen-sequencing assembly genome
updated 11 months ago by 43k • written 4.5 years ago by ★ 5.1k
29
votes
16
replies
3.2k
views
Forum: Making bioinformatics help and tutorials open
ensembl
updated 14 months ago by 43k • written 9.7 years ago by 23k
14
votes
16
replies
5.0k
views
8 follow
Forum: Yet Another Programming Language
Rust Julia
updated 12 months ago by 43k • written 6.8 years ago by 9.7k
24
votes
16
replies
2.3k
views
6 follow
Forum: #saveNCBI - it's a joke, right?
ncbi
updated 22 months ago by 43k • written 8.2 years ago by 11k
10
votes
16
replies
2.2k
views
Forum: Guide for posting better questions
meta
updated 13 months ago by 43k • written 7.7 years ago by 9.7k
18
votes
16
replies
1.8k
views
Forum: Why are people not working on gene prioritization and candidate gene selection for new experiment design?
gene-prioritization
updated 11 months ago by 43k • written 5.6 years ago by ▴ 20
32
votes
16
replies
12k
views
9 follow
Forum: How to switch from bench research to computational biology?
career
updated 22 months ago by 43k • written 9.2 years ago by ▴ 70
30
votes
16
replies
2.3k
views
9 follow
Forum: Which programming langauge shall I start as a beginner in Bioinformatics
programming-language single-cell
updated 11 months ago by 43k • written 4.0 years ago by • 0
54
votes
16
replies
5.7k
views
13 follow
Forum: The new era of bioinformatics: simple and fast tools, fewer and more informative data
kallisto computational-cost
updated 15 months ago by 43k • written 9.0 years ago by 100k
20
votes
16
replies
3.5k
views
Forum: Blacklist of questionable genbank entries
genbank gi stealth-virus blacklist
updated 14 months ago by 43k • written 10.0 years ago by 54k
23
votes
15
replies
3.7k
views
6 follow
Forum: Explaining purpose of using FastQC to a colleague
fastqc
updated 13 months ago by 43k • written 7.3 years ago by ▴ 810
13
votes
15
replies
3.4k
views
8 follow
Forum: Biostar under spam attack - restrictions added to post content and title
meta biostars
updated 15 months ago by 43k • written 8.9 years ago by 100k
12
votes
15
replies
2.3k
views
6 follow
Forum: Opinion: Bioinformatician - What comes first? Biology vs Informatics.
informatics biology knowledge
updated 13 months ago by 43k • written 7.3 years ago by ★ 2.7k
28
votes
15
replies
4.5k
views
8 follow
Forum: Anyone Use R For Their Bioinformatics Work?
r
updated 14 months ago by 43k • written 10.5 years ago by ▴ 320
16
votes
15
replies
6.3k
views
Forum: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Community?
hardware software
updated 14 months ago by 43k • written 10.1 years ago by ▴ 920
22
votes
15
replies
9.0k
views
11 follow
Forum: RNASeq user experience with Novogene?
RNA-Seq
updated 11 months ago by 43k • written 5.9 years ago by ▴ 80
19
votes
15
replies
2.0k
views
6 follow
Forum: Cross out line in Biostars
meta
updated 11 months ago by 43k • written 6.0 years ago by 5.3k
6
votes
15
replies
1.7k
views
Forum: PhD Bioinformatics on GWAS
SNP GWAS genome PHD
updated 11 months ago by 43k • written 4.3 years ago by ▴ 50
23
votes
15
replies
5.1k
views
6 follow
Forum: On the usage of Golang
assembly next-gen alignment
updated 11 months ago by 43k • written 5.6 years ago by ▴ 80
57
votes
15
replies
6.3k
views
9 follow
Forum: Good practices while dealing with very large datasets
Big-Data Programming
updated 12 months ago by 43k • written 7.0 years ago by ★ 1.2k
8
votes
15
replies
2.4k
views
7 follow
Forum: How to identify your analytic data is true?
RNA-Seq ChIP-Seq next-gen-sequencing
updated 11 months ago by 43k • written 6.8 years ago by ▴ 80
20
votes
15
replies
6.8k
views
Forum: How To Analyze Your Own Exome
exome filtering analysis vcf variant
updated 3.1 years ago by 43k • written 10.7 years ago by ▴ 130
21
votes
15
replies
2.1k
views
9 follow
Forum: Working abroad without a PhD
career
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.4k
24
votes
15
replies
2.0k
views
Forum: Users of 0 rep required to read etiquette guides before first post?
meta
updated 13 months ago by 43k • written 8.2 years ago by 13k
13
votes
15
replies
2.2k
views
Forum: Posting questions on Biostars without Googling or a preliminary Literature search
meta biostars
updated 13 months ago by 43k • written 7.5 years ago by ★ 1.5k
24
votes
15
replies
11k
views
11 follow
Forum: PhD in bioinformatics or biostatistics as a wet-lab scientist?
biology statistics PhD
updated 14 months ago by 43k • written 9.7 years ago by ▴ 70
10
votes
15
replies
2.1k
views
Forum: How should reference genome fasta files be distributed by UCSC?
reference-genome fasta freeze ucsc-genome-browser
updated 11 months ago by 22k • written 14 months ago by ★ 1.6k
23
votes
15
replies
2.5k
views
10 follow
Forum: I'm in a Masters of Bioinformatics Program and wanted to ask everyone for advice
career
updated 13 months ago by 43k • written 8.1 years ago by ▴ 20
42
votes
15
replies
7.8k
views
8 follow
Forum: Directions In Bioinformatics And Web-Based Data Visualization: Revisiting Javascript?
data-visualization python r
updated 14 months ago by 43k • written 11.5 years ago by 5.8k
8
votes
15
replies
4.1k
views
Forum: Can Galaxy Be Used Under The Hood? How About The Galaxy Appliance?
galaxy
updated 14 months ago by 43k • written 10.8 years ago by 11k
57
votes
15
replies
4.8k
views
9 follow
Forum: Entice Biologists To Learn R
r
updated 15 months ago by 43k • written 12.6 years ago by 5.3k
28
votes
15
replies
2.3k
views
12 follow
Forum: Should bioinformaticians learn the scientific names of plants and animals?
sequence
updated 11 months ago by 43k • written 5.8 years ago by ▴ 10
7
votes
15
replies
2.9k
views
Forum: Masters in Bioinformatics
ChIP-Seq genome next-gen R RNA-Seq
updated 2.2 years ago by 43k • written 9.4 years ago by • 0
19
votes
14
replies
2.2k
views
Forum: What is the amount of sequencing data produced annually?
data research sequencing
updated 7 months ago by 22k • written 7 months ago by ▴ 70
1,000 results • Page 4 of 20
Recent Votes
Comment: Question about methylation location
Comment: Question about methylation location
Comment: Question about methylation location
How to use minimap2?
Comment: RNA seq analysis
Comment: Filtering Multi-sample VCF file for all except one Genotype
Truncated metadata file report from ENA Portal API
Recent Locations • All
United Kingdom, 1 minute ago
United States, 2 minutes ago
United States, 2 minutes ago
Norway, 5 minutes ago
United States, 6 minutes ago
Spain, 6 minutes ago
Syracuse, NY, United States, 7 minutes ago
Recent Awards • All
Commentator to dthorbur ★ 1.9k
Popular Question to maria.soler • 0
Popular Question to melissachua90 ▴ 70
Popular Question to Lila M ★ 1.2k
Popular Question to Amr ▴ 160
Commentator to rpolicastro 13k
Popular Question to singcell • 0
Recent Replies
Comment: cellranger error message by Max • 0
I think the problem is your fastq_id. This should also read "RabhiN_PHLGEX". Hope this helps!
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK by Giulio Genovese ▴ 390
@yokofakun is correct. Also, do notice that the GATK option `--RECOVER_SWAPPED_REF_ALT True` does not work with indels. In general, if your…
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK by Pierre Lindenbaum 161k
I think this is useless, in the gatk doc: > For each variant, the tool will look for the target coordinate, reverse-complement and left-al…
Comment: Too many unpaired forward reads found by Trimmomatic by GenoMax 142k
Ideally you will know which adapters to use but if you don't then programs like `fastp` can auto-detect them. You could also use `bbduk.sh`…
Comment: UMI-Tools knee-method has great influence on the results of white list by i.sudbery 19k
With the `--read2-only` option (which isn't available yet on the bioconda version), this will complain about a lack of `--bc-pattern`. How…
Comment: samtools tview symbols by Ruqaiya • 0
What does the star mean then ?
Comment: RNA seq analysis by prifa ▴ 10
it's raw data **fastq.gz**, so for example I have 4 different samples from different tissue, sample A with 3 replicates, samples B,C and D …
Answer: Filtering Multi-sample VCF file for all except one Genotype by Pierre Lindenbaum 161k
> The goal is to remove all the variants which are unique to the KWSBambina sample. using jvarkit vcffilterjdk https://jvarkit.readthedo…
Comment: Too many unpaired forward reads found by Trimmomatic by SilhouetteQ • 0
The first example used the adapter file NexteraPE-PE.fa, but it generated more than 50% unpaired data...... The content of NexteraPE-PE.fa…
Comment: Filtering Multi-sample VCF file for all except one Genotype by schmince • 0
Ok so I definitely didn't understand at first what my goal was. The goal is to remove all the variants which are unique to the KWSBambina…
Comment: Question about methylation location by dthorbur ★ 1.9k
What data do you have? Generally, you start with sequencing data, which you need to clean and then map to a reference genome. Then dependin…
Comment: Too many unpaired forward reads found by Trimmomatic by GenoMax 142k
> when I didn't provide the adapter file Still see the file here `ILLUMINACLIP:./NexteraPE-PE.fa:2:30:10 `, unless that is an empty file.
Comment: Too many unpaired forward reads found by Trimmomatic by SilhouetteQ • 0
Interestingly, when I didn't provide the adapter file, the number of unpaired forward reads was significantly reduced: TrimmomaticPE…
Comment: Alignment of samples with spike-in by GenoMax 142k
> but then if you only allow to map uniquely mapped reads, you are losing spike-in information, How so? Spike-in's are generally unique s…
Traffic: 2574 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6