296
votes
121
replies
24k
views
29 follow
205
votes
58
replies
38k
views
31 follow
166
votes
41
replies
83k
views
27 follow
117
votes
59
replies
29k
views
23 follow
updated 1 day ago by
Ram
37k
•
written 7.7 years ago by
Angelo Victoria
▴
30
115
votes
52
replies
85k
views
21 follow
94
votes
25
replies
31k
views
11 follow
Tutorial:
Fastq Quality Control Shootout
92
votes
105
replies
32k
views
25 follow
updated 4 days ago by
s.w.vanderlaan
▴
40
•
written 4.4 years ago by
Kevin Blighe
84k
87
votes
16
replies
19k
views
15 follow
updated 6 days ago by
madbadradscientist
▴
20
•
written 7.7 years ago by
Christian
★
3.0k
59
votes
95
replies
14k
views
8 follow
54
votes
16
replies
4.9k
views
13 follow
updated 5 days ago by
Ram
37k
•
written 7.7 years ago by
Istvan Albert
96k
40
votes
10
replies
32k
views
7 follow
38
votes
11
replies
20k
views
11 follow
updated 4 days ago by
Oliver
•
0
•
written 5.3 years ago by
Sreeraj Thamban
▴
280
28
votes
21
replies
5.5k
views
7 follow
28
votes
14
replies
37k
views
8 follow
updated 1 day ago by
Ram
37k
•
written 7.7 years ago by
ravi.uhdnis
▴
220
27
votes
50
replies
15k
views
7 follow
updated 1 day ago by
Ram
37k
•
written 7.8 years ago by
fhsantanna
▴
600
27
votes
15
replies
40k
views
16 follow
25
votes
35
replies
28k
views
16 follow
updated 4 days ago by
Jan Röslein
▴
10
•
written 8.9 years ago by
komal.rathi
★
4.0k
23
votes
17
replies
9.2k
views
7 follow
21
votes
10
replies
6.1k
views
6 follow
updated 3 days ago by
sovrappensiero
▴
50
•
written 11.6 years ago by
2184687-1231-83-
★
5.0k
19
votes
16
replies
5.1k
views
10 follow
17
votes
23
replies
7.9k
views
13 follow
updated 4 days ago by
Ram
37k
•
written 10.8 years ago by
Biomonika (Noolean)
3.2k
14
votes
9
replies
410
views
3 days ago by
am29
▴
30
14
votes
9
replies
8.1k
views
7 follow
13
votes
4
replies
7.4k
views
updated 1 day ago by
Ram
37k
•
written 7.7 years ago by
Vincent Laufer
★
2.5k
13
votes
8
replies
24k
views
updated 4 days ago by
Ram
37k
•
written 7.7 years ago by
grayapply2009
▴
240
12
votes
5
replies
3.7k
views
6 follow
updated 2 days ago by
Ram
37k
•
written 7.7 years ago by
amirmhzadeh
▴
80
12
votes
7
replies
3.0k
views
11
votes
9
replies
1.4k
views
8 follow
11
votes
10
replies
11k
views
updated 1 day ago by
Ram
37k
•
written 7.7 years ago by
David_emir
▴
460
11
votes
8
replies
19k
views
7 follow
11
votes
11
replies
4.7k
views
11
votes
8
replies
3.8k
views
11
votes
8
replies
3.6k
views
7 follow
11
votes
2
replies
4.5k
views
updated 4 days ago by
Ram
37k
•
written 7.7 years ago by
R. Taylor Raborn
▴
290
10
votes
7
replies
6.3k
views
10
votes
11
replies
3.2k
views
10
votes
8
replies
13k
views
6 follow
updated 1 day ago by
dr.fakharunnisa
•
0
•
written 5.5 years ago by
ahmedaljumiliy
▴
40
9
votes
8
replies
3.8k
views
updated 4 days ago by
Ram
37k
•
written 4.8 years ago by
blooming.daisy333
▴
100
9
votes
11
replies
12k
views
6 follow
9
votes
12
replies
8.0k
views
9
votes
2
replies
3.5k
views
9
votes
3
replies
9.3k
views
9
votes
7
replies
42k
views
8
votes
9
replies
2.6k
views
7 follow
8
votes
15
replies
7.1k
views
8
votes
6
replies
8.1k
views
6 follow
8
votes
9
replies
1.3k
views
updated 3 days ago by
Ram
37k
•
written 7.7 years ago by
Endre Bakken Stovner
▴
950
8
votes
8
replies
892
views
7 follow
updated 6 days ago by
omaridris5315
▴
10
•
written 6 weeks ago by
bjorn
•
0
8
votes
8
replies
7.3k
views
updated 3 days ago by
Ram
37k
•
written 7.7 years ago by
fhsantanna
▴
600
8
votes
10
replies
3.6k
views
updated 1 day ago by
Ram
37k
•
written 7.7 years ago by
crivenster
▴
50
Recent Votes
Recent Locations •
All
United States, 7 minutes ago
Ohio, USA, 7 minutes ago
India, 18 minutes ago
United States, 20 minutes ago
Israel, 24 minutes ago
Brazil, 26 minutes ago
United States, 32 minutes ago
Recent Awards •
All
Popular Question to
atakanekiz
▴
310
Popular Question to
edus_bioinfo
▴
20
Popular Question to
storm1907
▴
30
Popular Question to
tarek.mohamed
▴
350
Popular Question to
Ankit
▴
390
Popular Question to
Hayler Edu
▴
30
Recent Replies
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
If you aren't willing to provide more precise information than this, sufficient for a reader to reproduce what you're seeing, I will delete…
Answer: Error while trying to install salmon
by
Chris
▴
10
Donwloading the package from conda (https://anaconda.org/conda-forge/boost/files?version=1.60.0) worked for me
wget https://anaconda.org/…
Answer: finding error to run edgeR, error in ploting MDS and after that in model matrix
by
Gordon Smyth
★
5.4k
First issue is that GEO series matrix files can't be read using `read.delim`.
Second issue is the data are from Agilent microarrays and …
Comment: PLINK2 selecting variants based on INFO score
by
m.c.roozen
•
0
I have tried that (the .pvar file contains the "1:10586" form as ID which I mentioned above) which leads to the same output as above, 0 var…
Answer: samtools markdup in Rsamtools
by
joe
▴
350
You can run any system command from inside R using `system()`. This works well if there is a single command without many dependencies. For …
Comment: samtools markdup in Rsamtools
by
Pierre Lindenbaum
152k
> But other solutions are also fine:
bash, nextflow, snakemake
Answer: samtools markdup in Rsamtools
by
ATpoint
68k
My honest opinion: Do processing of sequencing data on the standard command line with samtools. There is no need for the added complexity t…
Comment: To batch correct or analyse separately?
by
predeus
★
1.8k
Another great and up-to-date resource is this: https://www.sc-best-practices.org/preamble.html
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
The --exclude file must use the same variant IDs as your .pvar file. You should elaborate on what seemed to go wrong when you tried to arr…
Comment: phylogeny
by
炫
•
0
Hello, my problem is the same as yours, did you finally solve this problem?
Comment: Issue with hmmcalibrate during tutorial.
by
apcreyes29
•
0
If that's the case then I'll just proceed then. Thank you!
Answer: To batch correct or analyse separately?
by
ATpoint
68k
Instead of writing that all down I recommend to read the relevant part of the Bioconductor scRNA-seq book (OSCA) which covers the "how's" a…
Answer: Issue with hmmcalibrate during tutorial.
by
Mensur Dlakic
★
22k
Pretty sure that `hmmcalibrate` does not exist in HMMer version 3+ as the models are internally calibrated. I think you are using a manual …
Comment: High downstream gene expression
by
yoser4
▴
10
Thank you for your reply.
Your answer has helped me.
I am a novice in scientific research, and the reading of literature is really poor.
…
Traffic: 852 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6