8
votes
8
replies
570
views
8
votes
7
replies
462
views
updated 13 hours ago by
Istvan Albert
99k
•
written 2 days ago by
sehriban.buyukkilic
•
0
4
votes
5
replies
831
views
updated 13 hours ago by
Pierre Lindenbaum
158k
•
written 14 months ago by
jcn
▴
30
4
votes
5
replies
1.9k
views
3
votes
4
replies
230
views
3
votes
4
replies
203
views
3
votes
2
replies
272
views
updated 10 hours ago by
harold.smith.tarheel
★
4.9k
•
written 16 hours ago by
Axzd
▴
50
3
votes
2
replies
243
views
2
votes
3
replies
170
views
2
votes
5
replies
282
views
updated 12 hours ago by
Michael
53k
•
written 18 hours ago by
sil_bioinfo
▴
30
2
votes
2
replies
173
views
15 hours ago by
mrashad
▴
70
2
votes
8
replies
614
views
6 follow
updated 6 hours ago by
ATpoint
78k
•
written 18 days ago by
ellen.francis
▴
10
2
votes
11
replies
660
views
14 hours ago by
sil_bioinfo
▴
30
1
vote
2
replies
192
views
23 hours ago by
eamaunders
•
0
1
vote
1
reply
109
views
1
vote
5
replies
287
views
0
votes
0
replies
55
views
13 hours ago by
synat.keam
▴
80
0
votes
3
replies
171
views
updated 13 hours ago by
Istvan Albert
99k
•
written 17 hours ago by
Jingfang
•
0
0
votes
2
replies
247
views
0
votes
1
reply
113
views
updated 11 hours ago by
Istvan Albert
99k
•
written 15 hours ago by
curious
▴
730
0
votes
0
replies
57
views
0
votes
3
replies
178
views
0
votes
2
replies
864
views
updated 10 hours ago by
Betsy
•
0
•
written 2.5 years ago by
giulia.trauzzi
▴
10
0
votes
0
replies
41
views
9 hours ago by
luckyday1661
•
0
0
votes
0
replies
50
views
0
votes
1
reply
76
views
updated 9 hours ago by
Istvan Albert
99k
•
written 9 hours ago by
CL
•
0
0
votes
1
reply
339
views
0
votes
0
replies
60
views
0
votes
0
replies
50
views
0
votes
2
replies
137
views
updated 5 hours ago by
Kevin Blighe
86k
•
written 11 hours ago by
Giovana
•
0
0
votes
13
replies
867
views
updated 4 hours ago by
MohammadAlkadi
▴
70
•
written 5 weeks ago by
bk11
★
1.8k
0
votes
1
reply
57
views
0
votes
1
reply
61
views
0
votes
0
replies
52
views
11 hours ago by
Trevor
•
0
0
votes
0
replies
62
views
22 hours ago by
maxlaubstein
•
0
0
votes
0
replies
70
views
21 hours ago by
hellokwmin
•
0
0
votes
3
replies
153
views
0
votes
1
reply
133
views
updated 19 hours ago by
Nitin Narwade
★
1.5k
•
written 1 day ago by
tss243
•
0
0
votes
4
replies
196
views
updated 19 hours ago by
Nitin Narwade
★
1.5k
•
written 20 hours ago by
abourrieau
•
0
0
votes
2
replies
200
views
updated 19 hours ago by
fracarb8
★
1.3k
•
written 1 day ago by
synat.keam
▴
80
0
votes
1
reply
104
views
0
votes
9
replies
426
views
0
votes
0
replies
120
views
0
votes
5
replies
303
views
updated 16 hours ago by
Istvan Albert
99k
•
written 3 days ago by
Bjorn
•
0
0
votes
1
reply
157
views
updated 15 hours ago by
Scooter
▴
180
•
written 3 days ago by
hellokwmin
•
0
0
votes
1
reply
238
views
0
votes
1
reply
199
views
0
votes
1
reply
114
views
0
votes
1
reply
70
views
updated 14 hours ago by
sil_bioinfo
▴
30
•
written 15 hours ago by
carlopecoraro2
★
2.4k
Recent Votes
Recent Locations •
All
United States, just now
Hong Kong, 3 minutes ago
Perth, Australia, 6 minutes ago
Philippines, 13 minutes ago
Austria, 13 minutes ago
Japan, 23 minutes ago
India, 23 minutes ago
Recent Awards •
All
Popular Question to
mohammedtoufiq91
▴
230
Popular Question to
Mariah.Hoffman
▴
20
Commentator to
AK
★
2.2k
Popular Question to
wiscoyogi
▴
40
Popular Question to
Shicheng Guo
★
9.3k
Popular Question to
prasundutta87
▴
660
Popular Question to
massa.kassa.sc3na
▴
590
Recent Replies
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
by
GenoMax
136k
> less than 100 for some samples
Hmm. That is surprising but then in light of that fact ~20% recovery of cells does not sound bad.
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
by
newbee
▴
40
Thanks for raising these valid points. I do not have the answer right now. Lately, I heard from the PI that they started with a small numbe…
Comment: How to get multiple protein domain database domain name from id's
by
GenoMax
136k
A list of InterPro domains is available: https://ftp.ebi.ac.uk/pub/databases/interpro/current_release/entry.list
Answer: DIAMOND tutorial
by
GenoMax
136k
`DIAMOND` has a wiki page: https://github.com/bbuchfink/diamond/wiki
Links for DIAMOND papers are here: https://github.com/bbuchfink/diamo…
Comment: How to do simple pathway analysis?
by
AK
★
2.2k
Hi [he1k](https://www.biostars.org/u/139817/),
Please use the following script which downloads and parses the keg data on the fly:
[keg_hi…
Comment: Is there a need to batch correct FPKM or TPM values for within sample comparison
by
CTLong
▴
20
That's what I would assume, because we are not taking into account cross sample differences here. Thanks
Comment: Is there a need to batch correct FPKM or TPM values for within sample comparison
by
CTLong
▴
20
That's a good point. So its probably safest to not batch correct for within sample comparisons I guess?
Answer: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
by
MohammadAlkadi
▴
70
What is the purpose of doing so? I tried to do that by using the bam file generated by CellRanger. One **important detail** if you are work…
Comment: Guidance on Crucial Parameters for Bioinformatic Analysis of Metabolomic Data
by
Kevin Blighe
86k
Thank you - appreciate the translation.
Answer: Guidance on Crucial Parameters for Bioinformatic Analysis of Metabolomic Data
by
Kevin Blighe
86k
Em geral, uma taxa de descoberta falsa de 5% (p ajustado<0,05 ) deve ser usada para qualquer teste estatístico em que múltiplas hipóteses i…
Answer: WGCNA tutorial docs needed: Horvath Lab site down
by
ATpoint
78k
See link here from the developer: https://bioinformatics.stackexchange.com/a/21886/16676
Comment: WGCNA tutorial docs needed: Horvath Lab site down
by
Katie
•
0
I would also appreciate the PDFs if anyone has them please
Answer: Loftee no splice site annotations
by
AMARU
•
0
Hey,
did you solve it? I am having a very similar issue.
Thanks
Answer: Bulk and Single Cell RNA-seq online course
by
swbarnes2
13k
I'd start by getting tutorials for R libraries like DESeq, EdgeR, Seurat, etc, and learn by doing.
Traffic: 1756 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6