0
votes
4
replies
1.9k
views
1
vote
3
replies
2.4k
views
4.2 years ago by
williamtmills
▴
20
2
votes
3
replies
1.6k
views
7
votes
11
replies
3.2k
views
6 follow
0
votes
0
replies
708
views
0
votes
0
replies
1.4k
views
4.2 years ago by
tacrolimus
▴
150
3
votes
3
replies
1.1k
views
0
votes
0
replies
1.2k
views
0
votes
3
replies
2.3k
views
0
votes
2
replies
1.3k
views
1
vote
6
replies
2.7k
views
2
votes
8
replies
2.1k
views
updated 13 months ago by
Ram
45k
•
written 4.2 years ago by
isha.lily20
▴
10
0
votes
5
replies
1.5k
views
0
votes
0
replies
1.8k
views
4.2 years ago by
info
▴
80
1
vote
5
replies
2.3k
views
4.2 years ago by
kacollier
▴
30
0
votes
1
reply
898
views
updated 4.2 years ago by
jared.andrews07
★
19k
•
written 4.2 years ago by
barix
▴
20
0
votes
4
replies
3.4k
views
0
votes
0
replies
710
views
0
votes
0
replies
1.8k
views
3
votes
2
replies
1.6k
views
4.2 years ago by
quentin54520
▴
120
0
votes
1
reply
939
views
updated 4.2 years ago by
Kevin Blighe
89k
•
written 4.2 years ago by
GlycineMax
▴
10
4
votes
4
replies
2.2k
views
4.2 years ago by
raalsuwaidi
▴
110
2
votes
2
replies
1.3k
views
0
votes
2
replies
1.0k
views
3
votes
1
reply
8.0k
views
2
votes
3
replies
1.9k
views
2
votes
4
replies
2.9k
views
5
votes
5
replies
9.3k
views
7 follow
0
votes
1
reply
1.0k
views
updated 4.2 years ago by
seidel
11k
•
written 4.2 years ago by
akshitiz09
▴
20
0
votes
12
replies
7.2k
views
updated 4.2 years ago by
Learner
•
0
•
written 4.3 years ago by
Huang Zhihao
•
0
1
vote
0
replies
1.3k
views
4.2 years ago by
Wocher33
▴
10
5
votes
6
replies
2.9k
views
0
votes
1
reply
629
views
0
votes
2
replies
1.0k
views
4.2 years ago by
Vanish007
▴
50
1
vote
2
replies
1.3k
views
2
votes
1
reply
935
views
updated 4.2 years ago by
Kevin Blighe
89k
•
written 4.2 years ago by
FeedMeDumplings
•
0
1
vote
2
replies
2.4k
views
7
votes
4
replies
1.3k
views
1
vote
2
replies
1.4k
views
4.2 years ago by
raalsuwaidi
▴
110
1
vote
0
replies
930
views
updated 2.2 years ago by
Ram
45k
•
written 4.2 years ago by
sharmatina189059
▴
110
0
votes
1
reply
1.5k
views
0
votes
2
replies
1.3k
views
0
votes
1
reply
750
views
6
votes
7
replies
3.8k
views
updated 2.5 years ago by
lieven.sterck
15k
•
written 4.2 years ago by
Sarah
▴
60
0
votes
0
replies
1.0k
views
News:
FINAL CALL :: Online Course - A Practical Introduction to NGS Data Analysis (July 14-16, 2021)
updated 2.5 years ago by
Ram
45k
•
written 4.2 years ago by
David Langenberger
11k
1
vote
8
replies
3.5k
views
5
votes
4
replies
1.4k
views
updated 13 months ago by
Ram
45k
•
written 4.2 years ago by
isha.lily20
▴
10
0
votes
1
reply
1.2k
views
updated 4.2 years ago by
Ram
45k
•
written 4.2 years ago by
sara_johem
•
0
0
votes
1
reply
1.2k
views
updated 4.2 years ago by
swbarnes2
15k
•
written 4.2 years ago by
wang-yanfang
•
0
3
votes
2
replies
2.4k
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
United States, 5 minutes ago
Spain, 16 minutes ago
United States, 19 minutes ago
Stony Brook University, NY, 19 minutes ago
Whitefish, MT, 20 minutes ago
Connecticut, 34 minutes ago
Recent Awards •
All
Popular Question to
mbramble
•
0
Popular Question to
okiedokie1208
▴
40
Popular Question to
Mariano
•
0
Popular Question to
Physalia-courses
★
2.6k
Popular Question to
massimofaggiani
•
0
Popular Question to
Vanish007
▴
50
Popular Question to
Tom
•
0
Recent Replies
Answer: STARlong for pacbio Isoseq reads
by
YuZJ
•
0
Hello, you may try deSALT (DOI: 10.1186/s13059-019-1895-9, GitHub: ydLiu-HIT/deSALT) or uLTRA (DOI: 10.1093/bioinformatics/btab540, GitHub:…
Comment: Shift in RNA 3' position, Term-Seq vs RNASeq
by
acvill
▴
350
Without knowing the details of the Term-seq method, could the 38 nt shift be accounted for by the difference in the position of the ribosom…
Comment: STARlong for pacbio Isoseq reads
by
GenoMax
153k
You could give `mapPacBio.sh` from BBMap suite a try while you wait for other answers. That works for reads up to 6 kb. BBMap has a new hom…
Comment: STARlong for pacbio Isoseq reads
by
Buffo
★
2.4k
The average is 1.8kb. I was planning to post it on GitHub, but it seems like the repository has been unattended for the last months, so I d…
Comment: Getting just fastqc.zip file?
by
GenoMax
153k
Yes, You can either use it on command line or use the graphical user interface.
Comment: STARlong for pacbio Isoseq reads
by
GenoMax
153k
What is the average length of your reads? That error sounds like a bug, so you may want to post that on `STAR` repo as an issue.
I assume …
Comment: Getting just fastqc.zip file?
by
pourhangleila95
•
0
I want to perform fastQC on my data.Do you use fastQC software for doing it?
Comment: Whole Genome Sequencing IG regions
by
719
•
0
Sorry for the poor wording of the original post, also should say I really appreciate people taking a moment to look at my post. My main con…
Comment: Is total miRNA in EV constant? Implications for library size normalization.
by
Thomas.H.Hampton
▴
10
Thanks again for your carefully considered reply. You asked what I am hoping to learn from a DE analysis.
Autologous stem cells are well …
Comment: Subsetting before QC in Spatial Transcriptomics
by
Kent
▴
30
Hi ATpoint, thank you very much for the helpful insight! I'm still doing some literature reading on this myself, but have you come across a…
Comment: Whole Genome Sequencing IG regions
by
ATpoint
89k
The question is what you are after. Is this a disease setup, or...well, what is this all about. Generally, these regions are hotspots of hy…
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
These are PacBio HiFi reads (total reads 5,237,005), and the total data size is 255 GB.
I am the only user on the system.
Comment: Subsetting before QC in Spatial Transcriptomics
by
ATpoint
89k
Yes, absolutely. It is even (to me) a good practice to do (automated) crude celltype assignment first because QC metrics, such as number of…
Traffic: 6791 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6